RNA–Protein interactions for RNA: ENST00000467949.1

TSC2-211, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-211ENST00000467949 MINK1Q8N4C8 1332 aaPredicted RBP20.37■□□□□ 0.85
TSC2-211ENST00000467949 BTG4Q9NY30 223 aa20.37■□□□□ 0.85
TSC2-211ENST00000467949 PSDA5PKW4 1024 aaPredicted RBP20.36■□□□□ 0.85
TSC2-211ENST00000467949 TRAK1Q9UPV9 953 aa20.36■□□□□ 0.85
TSC2-211ENST00000467949 GPRASP1Q5JY77 1395 aa20.35■□□□□ 0.85
TSC2-211ENST00000467949 ACIN1Q9UKV3 1341 aaKnown RBP20.35■□□□□ 0.85
TSC2-211ENST00000467949 EIF3AQ14152 1382 aaKnown RBP20.34■□□□□ 0.85
TSC2-211ENST00000467949 BAG6P46379 1132 aa20.34■□□□□ 0.85
TSC2-211ENST00000467949 TOPAZ1Q8N9V7 1692 aa20.34■□□□□ 0.85
TSC2-211ENST00000467949 RAB3GAP2Q9H2M9 1393 aa20.34■□□□□ 0.85
TSC2-211ENST00000467949 ATP7BP35670 1465 aa20.33■□□□□ 0.85
TSC2-211ENST00000467949 FAM182BQ5T319 152 aa20.33■□□□□ 0.85
TSC2-211ENST00000467949 SPATA31A5Q5VU36 1347 aa20.3■□□□□ 0.84
TSC2-211ENST00000467949 SPATA31A7Q8IWB4 1347 aa20.3■□□□□ 0.84
TSC2-211ENST00000467949 WASLO00401 505 aaPredicted RBP20.29■□□□□ 0.84
TSC2-211ENST00000467949 EN1Q05925 392 aaPredicted RBP20.29■□□□□ 0.84
TSC2-211ENST00000467949 PAK3O75914 559 aaPredicted RBP20.28■□□□□ 0.84
TSC2-211ENST00000467949 HRCP23327 699 aa20.28■□□□□ 0.84
TSC2-211ENST00000467949 KDM2AQ9Y2K7 1162 aa20.28■□□□□ 0.84
TSC2-211ENST00000467949 NRKQ7Z2Y5 1582 aa20.28■□□□□ 0.84
TSC2-211ENST00000467949 DISP2A7MBM2 1401 aa20.27■□□□□ 0.84
TSC2-211ENST00000467949 NGDNQ8NEJ9 315 aaKnown RBP20.27■□□□□ 0.84
TSC2-211ENST00000467949 PRDM11Q9NQV5 511 aa20.27■□□□□ 0.84
TSC2-211ENST00000467949 RREB1Q92766 1687 aa20.26■□□□□ 0.83
TSC2-211ENST00000467949 KIAA0232Q92628 1395 aa20.26■□□□□ 0.83
TSC2-211ENST00000467949 DCAF11Q8TEB1 546 aa20.26■□□□□ 0.83
TSC2-211ENST00000467949 NUP188Q5SRE5 1749 aa20.24■□□□□ 0.83
TSC2-211ENST00000467949 R3HDM1Q15032 1099 aaKnown RBP20.23■□□□□ 0.83
TSC2-211ENST00000467949 CHRNA2Q15822 529 aa20.23■□□□□ 0.83
TSC2-211ENST00000467949 SPATA31A1Q5TZJ5 1347 aa20.23■□□□□ 0.83
TSC2-211ENST00000467949 LMO7Q8WWI1 1683 aa20.22■□□□□ 0.83
TSC2-211ENST00000467949 STRN4Q9NRL3 753 aa20.21■□□□□ 0.83
TSC2-211ENST00000467949 KIAA1210Q9ULL0 1709 aa20.2■□□□□ 0.82
TSC2-211ENST00000467949 EZH2Q15910 746 aaKnown RBP20.2■□□□□ 0.82
TSC2-211ENST00000467949 NUTM2GQ5VZR2 741 aa20.2■□□□□ 0.82
TSC2-211ENST00000467949 NUDT16Q96DE0 195 aaKnown RBP20.2■□□□□ 0.82
TSC2-211ENST00000467949 SSH2Q76I76 1423 aa20.19■□□□□ 0.82
TSC2-211ENST00000467949 ZC3H6P61129 1189 aaKnown RBP20.18■□□□□ 0.82
TSC2-211ENST00000467949 CAMTA1Q9Y6Y1 1673 aa20.18■□□□□ 0.82
TSC2-211ENST00000467949 TRIM37O94972 964 aa20.17■□□□□ 0.82
TSC2-211ENST00000467949 POLR3AO14802 1390 aaPredicted RBP20.17■□□□□ 0.82
TSC2-211ENST00000467949 PARP4Q9UKK3 1724 aaKnown RBP20.16■□□□□ 0.82
TSC2-211ENST00000467949 USP35Q9P2H5 1018 aa20.16■□□□□ 0.82
TSC2-211ENST00000467949 ACEP12821 1306 aa20.14■□□□□ 0.81
TSC2-211ENST00000467949 CAMKK2Q96RR4 588 aa20.14■□□□□ 0.81
TSC2-211ENST00000467949 CDK19Q9BWU1 502 aa20.14■□□□□ 0.81
TSC2-211ENST00000467949 WNK3Q9BYP7 1800 aa20.13■□□□□ 0.81
TSC2-211ENST00000467949 QRICH2Q9H0J4 1663 aa20.13■□□□□ 0.81
TSC2-211ENST00000467949 FAM196AQ6ZSG2 479 aa20.13■□□□□ 0.81
TSC2-211ENST00000467949 LRRC37A3O60309 1634 aa20.12■□□□□ 0.81
TSC2-211ENST00000467949 PARD3Q8TEW0 1356 aa20.11■□□□□ 0.81
TSC2-211ENST00000467949 APBA3O96018 575 aa20.11■□□□□ 0.81
TSC2-211ENST00000467949 STAC3Q96MF2 364 aa20.11■□□□□ 0.81
TSC2-211ENST00000467949 SBF2Q86WG5 1849 aa20.11■□□□□ 0.81
TSC2-211ENST00000467949 PEAK1Q9H792 1746 aa20.1■□□□□ 0.81
TSC2-211ENST00000467949 USP19O94966 1318 aa20.1■□□□□ 0.81
TSC2-211ENST00000467949 LARP1Q6PKG0 1096 aaKnown RBP20.1■□□□□ 0.81
TSC2-211ENST00000467949 CPDO75976 1380 aa20.09■□□□□ 0.81
TSC2-211ENST00000467949 NBPF8Q3BBV2 869 aa20.09■□□□□ 0.81
TSC2-211ENST00000467949 BARGINQ6ZT62 677 aa20.09■□□□□ 0.81
TSC2-211ENST00000467949 COL5A2P05997 1499 aaPredicted RBP20.09■□□□□ 0.81
TSC2-211ENST00000467949 RGPD3A6NKT7 1758 aaPredicted RBP20.08■□□□□ 0.81
TSC2-211ENST00000467949 RGPD4Q7Z3J3 1758 aa20.08■□□□□ 0.81
TSC2-211ENST00000467949 EVA1CP58658 441 aa20.08■□□□□ 0.81
TSC2-211ENST00000467949 PPIP5K1Q6PFW1 1433 aa20.08■□□□□ 0.8
TSC2-211ENST00000467949 PDE3BQ13370 1112 aa20.07■□□□□ 0.8
TSC2-211ENST00000467949 ABTB2Q8N961 1025 aa20.07■□□□□ 0.8
TSC2-211ENST00000467949 CCDC61Q9Y6R9 512 aa20.07■□□□□ 0.8
TSC2-211ENST00000467949 PLEKHG3A1L390 1219 aa20.06■□□□□ 0.8
TSC2-211ENST00000467949 TCP11L2Q8N4U5 519 aa20.06■□□□□ 0.8
TSC2-211ENST00000467949 PIK3C2AO00443 1686 aa20.06■□□□□ 0.8
TSC2-211ENST00000467949 AKAP12Q02952 1782 aa20.06■□□□□ 0.8
TSC2-211ENST00000467949 COL18A1P39060 1754 aa20.04■□□□□ 0.8
TSC2-211ENST00000467949 RGPD5Q99666 1765 aa20.04■□□□□ 0.8
TSC2-211ENST00000467949 SLIT3O75094 1523 aa20.04■□□□□ 0.8
TSC2-211ENST00000467949 NBPF1Q3BBV0 1214 aa20.02■□□□□ 0.8
TSC2-211ENST00000467949 CRB1P82279 1406 aa20.02■□□□□ 0.79
TSC2-211ENST00000467949 CASZ1Q86V15 1759 aa20.01■□□□□ 0.79
TSC2-211ENST00000467949 ZBTB7CA1YPR0 619 aa20.01■□□□□ 0.79
TSC2-211ENST00000467949 SRPK2P78362 688 aaKnown RBP20.01■□□□□ 0.79
TSC2-211ENST00000467949 OVOS2A0A0G2JMS6 1433 aa20.01■□□□□ 0.79
TSC2-211ENST00000467949 OVOS2A0A0J9YW53 1432 aa20.01■□□□□ 0.79
TSC2-211ENST00000467949 OVOS2Q6IE36 1432 aa20.01■□□□□ 0.79
TSC2-211ENST00000467949 GCP02774 474 aa20■□□□□ 0.79
TSC2-211ENST00000467949 NLRP13Q86W25 1043 aa20■□□□□ 0.79
TSC2-211ENST00000467949 CABP2Q9NPB3 220 aa20■□□□□ 0.79
TSC2-211ENST00000467949 USP6P35125 1406 aa20■□□□□ 0.79
TSC2-211ENST00000467949 CENPJQ9HC77 1338 aaPredicted RBP20■□□□□ 0.79
TSC2-211ENST00000467949 THRAP3Q9Y2W1 955 aaKnown RBP19.99■□□□□ 0.79
TSC2-211ENST00000467949 NBPF14Q5TI25 921 aa19.98■□□□□ 0.79
TSC2-211ENST00000467949 TRPM1Q7Z4N2 1603 aa19.96■□□□□ 0.79
TSC2-211ENST00000467949 BRD4O60885 1362 aaPredicted RBP19.95■□□□□ 0.78
TSC2-211ENST00000467949 AATKQ6ZMQ8 1374 aa19.95■□□□□ 0.78
TSC2-211ENST00000467949 MYOM1P52179 1685 aa19.94■□□□□ 0.78
TSC2-211ENST00000467949 CPSF1Q10570 1443 aaKnown RBP19.93■□□□□ 0.78
TSC2-211ENST00000467949 NLRP6P59044 892 aa19.93■□□□□ 0.78
TSC2-211ENST00000467949 SPON1Q9HCB6 807 aa19.92■□□□□ 0.78
TSC2-211ENST00000467949 ANO8Q9HCE9 1232 aaPredicted RBP19.92■□□□□ 0.78
TSC2-211ENST00000467949 CABP1Q9NZU7 370 aa19.92■□□□□ 0.78
TSC2-211ENST00000467949 PPP1R1BQ9UD71 204 aaPredicted RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms