RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 EIF4G2P78344 907 aaKnown RBP eCLIP9.52□□□□□ -0.89
GAPVD1-211ENST00000467707 TJAP1Q5JTD0 557 aa9.52□□□□□ -0.89
GAPVD1-211ENST00000467707 GPSM3Q9Y4H4 160 aa9.52□□□□□ -0.89
GAPVD1-211ENST00000467707 CTHP32929 405 aa9.51□□□□□ -0.89
GAPVD1-211ENST00000467707 VAC14Q08AM6 782 aa9.51□□□□□ -0.89
GAPVD1-211ENST00000467707 KCNH2Q12809 1159 aa9.51□□□□□ -0.89
GAPVD1-211ENST00000467707 HDGFL1Q5TGJ6 251 aa9.51□□□□□ -0.89
GAPVD1-211ENST00000467707 ZBBXA8MT70 800 aa9.5□□□□□ -0.89
GAPVD1-211ENST00000467707 NR1H3Q13133 447 aa9.5□□□□□ -0.89
GAPVD1-211ENST00000467707 NBPF14Q5TI25 921 aa9.5□□□□□ -0.89
GAPVD1-211ENST00000467707 MAP10Q9P2G4 905 aa9.5□□□□□ -0.89
GAPVD1-211ENST00000467707 SLC6A16Q9GZN6 736 aa9.49□□□□□ -0.89
GAPVD1-211ENST00000467707 ALG2Q9H553 416 aa9.49□□□□□ -0.89
GAPVD1-211ENST00000467707 TLL1O43897 1013 aa9.48□□□□□ -0.89
GAPVD1-211ENST00000467707 PPP1R15AO75807 674 aaPredicted RBP9.48□□□□□ -0.89
GAPVD1-211ENST00000467707 SEMA3FQ13275 785 aa9.48□□□□□ -0.89
GAPVD1-211ENST00000467707 PDXDC2PQ6P474 469 aa9.48□□□□□ -0.89
GAPVD1-211ENST00000467707 HCSTQ9UBK5 93 aa9.48□□□□□ -0.89
GAPVD1-211ENST00000467707 MCCD1P59942 119 aaPredicted RBP9.47□□□□□ -0.89
GAPVD1-211ENST00000467707 PTK2Q05397 1052 aa9.47□□□□□ -0.89
GAPVD1-211ENST00000467707 PRDM9Q9NQV7 894 aa9.47□□□□□ -0.89
GAPVD1-211ENST00000467707 ADAMTS19Q8TE59 1207 aa9.46□□□□□ -0.9
GAPVD1-211ENST00000467707 FBXO45P0C2W1 286 aa9.45□□□□□ -0.9
GAPVD1-211ENST00000467707 ZNF516Q92618 1163 aa9.45□□□□□ -0.9
GAPVD1-211ENST00000467707 UNC93B1Q9H1C4 597 aa9.43□□□□□ -0.9
GAPVD1-211ENST00000467707 ITGBL1O95965 494 aaPredicted RBP9.42□□□□□ -0.9
GAPVD1-211ENST00000467707 KCNC4Q03721 635 aa9.42□□□□□ -0.9
GAPVD1-211ENST00000467707 CCDC24Q8N4L8 307 aa9.42□□□□□ -0.9
GAPVD1-211ENST00000467707 RNF166Q96A37 237 aaPredicted RBP9.42□□□□□ -0.9
GAPVD1-211ENST00000467707 PPP1R12CQ9BZL4 782 aa9.42□□□□□ -0.9
GAPVD1-211ENST00000467707 NFATC2IPQ8NCF5 419 aa9.41□□□□□ -0.9
GAPVD1-211ENST00000467707 ACIN1Q9UKV3 1341 aaKnown RBP9.4□□□□□ -0.9
GAPVD1-211ENST00000467707 S1PR4O95977 384 aa9.4□□□□□ -0.9
GAPVD1-211ENST00000467707 GGCXP38435 758 aa9.4□□□□□ -0.9
GAPVD1-211ENST00000467707 PDE4CQ08493 712 aa9.4□□□□□ -0.9
GAPVD1-211ENST00000467707 PBXIP1Q96AQ6 731 aa9.4□□□□□ -0.9
GAPVD1-211ENST00000467707 ARHGAP9Q9BRR9 750 aa9.39□□□□□ -0.91
GAPVD1-211ENST00000467707 PALM3A6NDB9 673 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-211ENST00000467707 PDIA4P13667 645 aaKnown RBP9.38□□□□□ -0.91
GAPVD1-211ENST00000467707 CFAP70Q5T0N1 1121 aa9.38□□□□□ -0.91
GAPVD1-211ENST00000467707 SH3BP5LQ7L8J4 393 aa9.38□□□□□ -0.91
GAPVD1-211ENST00000467707 BPHLQ86WA6 291 aaPredicted RBP9.38□□□□□ -0.91
GAPVD1-211ENST00000467707 NKX2-3Q8TAU0 364 aa9.38□□□□□ -0.91
GAPVD1-211ENST00000467707 FCF1Q9Y324 198 aaKnown RBP9.38□□□□□ -0.91
GAPVD1-211ENST00000467707 UCN2Q96RP3 112 aa9.37□□□□□ -0.91
GAPVD1-211ENST00000467707 ATP9BO43861 1147 aa9.36□□□□□ -0.91
GAPVD1-211ENST00000467707 PTCRAQ6ISU1 281 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-211ENST00000467707 ZBTB33Q86T24 672 aa9.36□□□□□ -0.91
GAPVD1-211ENST00000467707 SPNS2Q8IVW8 549 aa9.36□□□□□ -0.91
GAPVD1-211ENST00000467707 TFIP11Q9UBB9 837 aaKnown RBP9.36□□□□□ -0.91
GAPVD1-211ENST00000467707 SH3RF1Q7Z6J0 888 aa9.35□□□□□ -0.91
GAPVD1-211ENST00000467707 ADAM32Q8TC27 787 aa9.35□□□□□ -0.91
GAPVD1-211ENST00000467707 ZBTB24O43167 697 aaPredicted RBP9.34□□□□□ -0.91
GAPVD1-211ENST00000467707 ANKLE1Q8NAG6 615 aa9.34□□□□□ -0.91
GAPVD1-211ENST00000467707 ZNF511Q8NB15 262 aa9.34□□□□□ -0.91
GAPVD1-211ENST00000467707 MAFBQ9Y5Q3 323 aaPredicted RBP9.34□□□□□ -0.91
GAPVD1-211ENST00000467707 LZTS3O60299 673 aaPredicted RBP9.33□□□□□ -0.92
GAPVD1-211ENST00000467707 LMOD1P29536 600 aaPredicted RBP9.33□□□□□ -0.92
GAPVD1-211ENST00000467707 SLFNL1Q499Z3 407 aa9.33□□□□□ -0.92
GAPVD1-211ENST00000467707 BAP1Q92560 729 aa9.33□□□□□ -0.92
GAPVD1-211ENST00000467707 OCSTAMPQ9BR26 566 aa9.33□□□□□ -0.92
GAPVD1-211ENST00000467707 CEP126Q9P2H0 1117 aa9.33□□□□□ -0.92
GAPVD1-211ENST00000467707 PCDHB9Q9Y5E1 797 aa9.33□□□□□ -0.92
GAPVD1-211ENST00000467707 SRPK2P78362 688 aaKnown RBP9.32□□□□□ -0.92
GAPVD1-211ENST00000467707 AGERQ15109 404 aa9.32□□□□□ -0.92
GAPVD1-211ENST00000467707 CCDC125Q86Z20 511 aa9.32□□□□□ -0.92
GAPVD1-211ENST00000467707 PLEKHM2Q8IWE5 1019 aa9.32□□□□□ -0.92
GAPVD1-211ENST00000467707 TRAIPQ9BWF2 469 aa9.32□□□□□ -0.92
GAPVD1-211ENST00000467707 CDV3Q9UKY7 258 aaKnown RBP9.32□□□□□ -0.92
GAPVD1-211ENST00000467707 RFX1P22670 979 aa9.31□□□□□ -0.92
GAPVD1-211ENST00000467707 TBC1D9Q6ZT07 1266 aa9.31□□□□□ -0.92
GAPVD1-211ENST00000467707 DZIP3Q86Y13 1208 aaKnown RBP9.31□□□□□ -0.92
GAPVD1-211ENST00000467707 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.3□□□□□ -0.92
GAPVD1-211ENST00000467707 MAGEB6P1A0A0J9YX57 407 aa9.3□□□□□ -0.92
GAPVD1-211ENST00000467707 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
GAPVD1-211ENST00000467707 MAP7D1Q3KQU3 841 aa9.3□□□□□ -0.92
GAPVD1-211ENST00000467707 SKIP12755 728 aa9.29□□□□□ -0.92
GAPVD1-211ENST00000467707 RPIAP49247 311 aa9.29□□□□□ -0.92
GAPVD1-211ENST00000467707 WNT7BP56706 349 aa9.29□□□□□ -0.92
GAPVD1-211ENST00000467707 NBPF20Q3BBV1 942 aa9.29□□□□□ -0.92
GAPVD1-211ENST00000467707 RNF20Q5VTR2 975 aa9.29□□□□□ -0.92
GAPVD1-211ENST00000467707 RNF135Q8IUD6 432 aa9.29□□□□□ -0.92
GAPVD1-211ENST00000467707 TRMT44Q8IYL2 757 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-211ENST00000467707 RETREG2Q8NC44 543 aa9.29□□□□□ -0.92
GAPVD1-211ENST00000467707 SLC10A4Q96EP9 437 aa9.29□□□□□ -0.92
GAPVD1-211ENST00000467707 USTQ9Y2C2 406 aa9.29□□□□□ -0.92
GAPVD1-211ENST00000467707 ATG7O95352 703 aa9.28□□□□□ -0.92
GAPVD1-211ENST00000467707 TRIM32Q13049 653 aa9.28□□□□□ -0.92
GAPVD1-211ENST00000467707 ERFEQ4G0M1 354 aa9.28□□□□□ -0.92
GAPVD1-211ENST00000467707 PHTF2Q8N3S3 785 aa9.28□□□□□ -0.92
GAPVD1-211ENST00000467707 C1QTNF2Q9BXJ5 285 aa9.28□□□□□ -0.92
GAPVD1-211ENST00000467707 CARD14Q9BXL6 1004 aa9.28□□□□□ -0.92
GAPVD1-211ENST00000467707 VRTNQ9H8Y1 702 aa9.28□□□□□ -0.92
GAPVD1-211ENST00000467707 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-211ENST00000467707 USP17L3A6NCW0 530 aa9.27□□□□□ -0.93
GAPVD1-211ENST00000467707 USP17L4A6NCW7 530 aa9.27□□□□□ -0.93
GAPVD1-211ENST00000467707 USP17L5A8MUK1 530 aa9.27□□□□□ -0.93
GAPVD1-211ENST00000467707 CSB-PGBD3P0DP91 1061 aa9.27□□□□□ -0.93
GAPVD1-211ENST00000467707 SH3BP2P78314 561 aa9.27□□□□□ -0.93
GAPVD1-211ENST00000467707 LINC01559Q495D7 138 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms