RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 STK26Q9P289 416 aa6.61□□□□□ -1.35
CPS1-205ENST00000467353 PHF8Q9UPP1 1060 aa6.61□□□□□ -1.35
CPS1-205ENST00000467353 TNS3Q68CZ2 1445 aa6.6□□□□□ -1.35
CPS1-205ENST00000467353 PRAG1Q86YV5 1406 aa6.6□□□□□ -1.35
CPS1-205ENST00000467353 SBNO1A3KN83 1393 aa6.6□□□□□ -1.35
CPS1-205ENST00000467353 NUP155O75694 1391 aa6.6□□□□□ -1.35
CPS1-205ENST00000467353 RGPD1P0DJD0 1748 aa6.6□□□□□ -1.35
CPS1-205ENST00000467353 PDE3BQ13370 1112 aa6.6□□□□□ -1.35
CPS1-205ENST00000467353 PROM2Q8N271 834 aa6.6□□□□□ -1.35
CPS1-205ENST00000467353 PTPN23Q9H3S7 1636 aa6.6□□□□□ -1.35
CPS1-205ENST00000467353 TNS1Q9HBL0 1735 aaKnown RBP6.59□□□□□ -1.35
CPS1-205ENST00000467353 CROCC2H7BZ55 1655 aa6.59□□□□□ -1.35
CPS1-205ENST00000467353 FAM50AQ14320 339 aaKnown RBP6.59□□□□□ -1.35
CPS1-205ENST00000467353 PTF1AQ7RTS3 328 aa6.59□□□□□ -1.35
CPS1-205ENST00000467353 SGIP1Q9BQI5 828 aa6.59□□□□□ -1.35
CPS1-205ENST00000467353 E9PCH4 1651 aa6.58□□□□□ -1.36
CPS1-205ENST00000467353 ARHGEF10O15013 1369 aa6.58□□□□□ -1.36
CPS1-205ENST00000467353 PLEKHH1Q9ULM0 1364 aa6.58□□□□□ -1.36
CPS1-205ENST00000467353 GPR162Q16538 588 aa6.58□□□□□ -1.36
CPS1-205ENST00000467353 STRN4Q9NRL3 753 aa6.58□□□□□ -1.36
CPS1-205ENST00000467353 USP35Q9P2H5 1018 aa6.58□□□□□ -1.36
CPS1-205ENST00000467353 CDC42BPGQ6DT37 1551 aa6.57□□□□□ -1.36
CPS1-205ENST00000467353 NEXMIFQ5QGS0 1516 aa6.57□□□□□ -1.36
CPS1-205ENST00000467353 PLSCR1O15162 318 aa6.57□□□□□ -1.36
CPS1-205ENST00000467353 CAPN15O75808 1086 aa6.57□□□□□ -1.36
CPS1-205ENST00000467353 HSPA6P17066 643 aa6.57□□□□□ -1.36
CPS1-205ENST00000467353 CHRNA2Q15822 529 aa6.57□□□□□ -1.36
CPS1-205ENST00000467353 BARGINQ6ZT62 677 aa6.57□□□□□ -1.36
CPS1-205ENST00000467353 IFNLR1Q8IU57 520 aaPredicted RBP6.57□□□□□ -1.36
CPS1-205ENST00000467353 PMFBP1Q8TBY8 1022 aa6.57□□□□□ -1.36
CPS1-205ENST00000467353 BBXQ8WY36 941 aaPredicted RBP6.57□□□□□ -1.36
CPS1-205ENST00000467353 BCL11BQ9C0K0 894 aaPredicted RBP6.57□□□□□ -1.36
CPS1-205ENST00000467353 PRDM11Q9NQV5 511 aa6.57□□□□□ -1.36
CPS1-205ENST00000467353 PLCH1Q4KWH8 1693 aa6.57□□□□□ -1.36
CPS1-205ENST00000467353 VPS8Q8N3P4 1428 aa6.57□□□□□ -1.36
CPS1-205ENST00000467353 ADGRB2O60241 1585 aa6.57□□□□□ -1.36
CPS1-205ENST00000467353 NRKQ7Z2Y5 1582 aa6.57□□□□□ -1.36
CPS1-205ENST00000467353 NWD2Q9ULI1 1742 aa6.56□□□□□ -1.36
CPS1-205ENST00000467353 THSD7AQ9UPZ6 1657 aa6.56□□□□□ -1.36
CPS1-205ENST00000467353 PRKCSHP14314 528 aaPredicted RBP6.56□□□□□ -1.36
CPS1-205ENST00000467353 TPRNQ4KMQ1 711 aa6.56□□□□□ -1.36
CPS1-205ENST00000467353 TMEM132EQ6IEE7 984 aa6.56□□□□□ -1.36
CPS1-205ENST00000467353 ARXQ96QS3 562 aa6.56□□□□□ -1.36
CPS1-205ENST00000467353 IQGAP3Q86VI3 1631 aa6.56□□□□□ -1.36
CPS1-205ENST00000467353 COL13A1Q5TAT6 717 aaPredicted RBP6.55□□□□□ -1.36
CPS1-205ENST00000467353 MTFR1LQ9H019 292 aa6.55□□□□□ -1.36
CPS1-205ENST00000467353 TECPR2O15040 1411 aa6.55□□□□□ -1.36
CPS1-205ENST00000467353 RRBP1Q9P2E9 1410 aaKnown RBP6.55□□□□□ -1.36
CPS1-205ENST00000467353 NUP188Q5SRE5 1749 aa6.55□□□□□ -1.36
CPS1-205ENST00000467353 ABCC11Q96J66 1382 aa6.55□□□□□ -1.36
CPS1-205ENST00000467353 RPGRIP1LQ68CZ1 1315 aa6.54□□□□□ -1.36
CPS1-205ENST00000467353 NRAPQ86VF7 1730 aa6.54□□□□□ -1.36
CPS1-205ENST00000467353 EVA1CP58658 441 aa6.54□□□□□ -1.36
CPS1-205ENST00000467353 SLC15A2Q16348 729 aa6.54□□□□□ -1.36
CPS1-205ENST00000467353 LARP1Q6PKG0 1096 aaKnown RBP6.54□□□□□ -1.36
CPS1-205ENST00000467353 PELP1Q8IZL8 1130 aaKnown RBP6.54□□□□□ -1.36
CPS1-205ENST00000467353 KLHL34Q8N239 644 aa6.54□□□□□ -1.36
CPS1-205ENST00000467353 DNAJC5GQ8N7S2 189 aa6.54□□□□□ -1.36
CPS1-205ENST00000467353 STK32BQ9NY57 414 aa6.54□□□□□ -1.36
CPS1-205ENST00000467353 RREB1Q92766 1687 aa6.54□□□□□ -1.36
CPS1-205ENST00000467353 ADGRF5Q8IZF2 1346 aa6.53□□□□□ -1.36
CPS1-205ENST00000467353 MYOM1P52179 1685 aa6.53□□□□□ -1.36
CPS1-205ENST00000467353 SLC34A2O95436 690 aa6.53□□□□□ -1.36
CPS1-205ENST00000467353 ZC3H6P61129 1189 aaKnown RBP6.53□□□□□ -1.36
CPS1-205ENST00000467353 TCP11L2Q8N4U5 519 aa6.53□□□□□ -1.36
CPS1-205ENST00000467353 KIAA0232Q92628 1395 aa6.53□□□□□ -1.36
CPS1-205ENST00000467353 NRXN1Q9ULB1 1477 aa6.53□□□□□ -1.36
CPS1-205ENST00000467353 YBX3P16989 372 aaKnown RBP eCLIP6.52□□□□□ -1.37
CPS1-205ENST00000467353 PRELPP51888 382 aa6.52□□□□□ -1.37
CPS1-205ENST00000467353 TXNRD1Q16881 649 aa6.52□□□□□ -1.37
CPS1-205ENST00000467353 PAXIP1Q6ZW49 1069 aaPredicted RBP6.52□□□□□ -1.37
CPS1-205ENST00000467353 SPOCK2Q92563 424 aa6.52□□□□□ -1.37
CPS1-205ENST00000467353 SIRT1Q96EB6 747 aa6.52□□□□□ -1.37
CPS1-205ENST00000467353 MAP3K5Q99683 1374 aa6.52□□□□□ -1.37
CPS1-205ENST00000467353 CASZ1Q86V15 1759 aa6.52□□□□□ -1.37
CPS1-205ENST00000467353 DLC1Q96QB1 1528 aa6.51□□□□□ -1.37
CPS1-205ENST00000467353 LOC105371045A0A1W2PR82 267 aa6.51□□□□□ -1.37
CPS1-205ENST00000467353 PAK3O75914 559 aaPredicted RBP6.51□□□□□ -1.37
CPS1-205ENST00000467353 ECM2O94769 699 aaPredicted RBP6.51□□□□□ -1.37
CPS1-205ENST00000467353 SAFB2Q14151 953 aaKnown RBP eCLIP6.51□□□□□ -1.37
CPS1-205ENST00000467353 NLGN2Q8NFZ4 835 aa6.51□□□□□ -1.37
CPS1-205ENST00000467353 CFAP44Q96MT7 982 aa6.51□□□□□ -1.37
CPS1-205ENST00000467353 GPBP1L1Q9HC44 474 aaPredicted RBP6.51□□□□□ -1.37
CPS1-205ENST00000467353 COL14A1Q05707 1796 aaKnown RBP6.51□□□□□ -1.37
CPS1-205ENST00000467353 ACIN1Q9UKV3 1341 aaKnown RBP6.5□□□□□ -1.37
CPS1-205ENST00000467353 ATP10DQ9P241 1426 aa6.5□□□□□ -1.37
CPS1-205ENST00000467353 ROCK1Q13464 1354 aa6.5□□□□□ -1.37
CPS1-205ENST00000467353 GPRASP1Q5JY77 1395 aa6.5□□□□□ -1.37
CPS1-205ENST00000467353 C11orf95C9JLR9 678 aaPredicted RBP6.5□□□□□ -1.37
CPS1-205ENST00000467353 NUTM2GQ5VZR2 741 aa6.5□□□□□ -1.37
CPS1-205ENST00000467353 ZNF526Q8TF50 670 aaPredicted RBP6.5□□□□□ -1.37
CPS1-205ENST00000467353 THRAP3Q9Y2W1 955 aaKnown RBP6.5□□□□□ -1.37
CPS1-205ENST00000467353 SHANK3Q9BYB0 1731 aa6.5□□□□□ -1.37
CPS1-205ENST00000467353 CLTCL1P53675 1640 aa6.5□□□□□ -1.37
CPS1-205ENST00000467353 SSH2Q76I76 1423 aa6.5□□□□□ -1.37
CPS1-205ENST00000467353 KIF1AQ12756 1690 aa6.49□□□□□ -1.37
CPS1-205ENST00000467353 MARCH10Q8NA82 808 aaPredicted RBP6.49□□□□□ -1.37
CPS1-205ENST00000467353 PRAM1Q96QH2 718 aa6.49□□□□□ -1.37
CPS1-205ENST00000467353 ZBTB12Q9Y330 459 aaPredicted RBP6.49□□□□□ -1.37
CPS1-205ENST00000467353 ABCA3Q99758 1704 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms