RNA–Protein interactions for RNA: ENST00000467343.1

CRAT-209, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-209ENST00000467343 ATRNO75882 1429 aa17.55■□□□□ 0.4
CRAT-209ENST00000467343 PPIP5K1Q6PFW1 1433 aa17.55■□□□□ 0.4
CRAT-209ENST00000467343 A0A0G2JS52 829 aa17.54■□□□□ 0.4
CRAT-209ENST00000467343 MYT1Q01538 1121 aa17.54■□□□□ 0.4
CRAT-209ENST00000467343 TOPAZ1Q8N9V7 1692 aa17.54■□□□□ 0.4
CRAT-209ENST00000467343 ALS2Q96Q42 1657 aa17.53■□□□□ 0.4
CRAT-209ENST00000467343 NBPF8Q3BBV2 869 aa17.53■□□□□ 0.4
CRAT-209ENST00000467343 UPF1Q92900 1129 aaKnown RBP eCLIP17.53■□□□□ 0.4
CRAT-209ENST00000467343 PLCH1Q4KWH8 1693 aa17.52■□□□□ 0.4
CRAT-209ENST00000467343 BCL9LQ86UU0 1499 aa17.52■□□□□ 0.4
CRAT-209ENST00000467343 GJD4Q96KN9 370 aaPredicted RBP17.52■□□□□ 0.4
CRAT-209ENST00000467343 ABTB2Q8N961 1025 aa17.51■□□□□ 0.39
CRAT-209ENST00000467343 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.5■□□□□ 0.39
CRAT-209ENST00000467343 PRDM11Q9NQV5 511 aa17.5■□□□□ 0.39
CRAT-209ENST00000467343 SLIT2O94813 1529 aa17.5■□□□□ 0.39
CRAT-209ENST00000467343 PLEKHG3A1L390 1219 aa17.49■□□□□ 0.39
CRAT-209ENST00000467343 BTG4Q9NY30 223 aa17.49■□□□□ 0.39
CRAT-209ENST00000467343 CABP1Q9NZU7 370 aa17.49■□□□□ 0.39
CRAT-209ENST00000467343 POLR3AO14802 1390 aaPredicted RBP17.49■□□□□ 0.39
CRAT-209ENST00000467343 ATAD2Q6PL18 1390 aa17.49■□□□□ 0.39
CRAT-209ENST00000467343 CLSPNQ9HAW4 1339 aa17.48■□□□□ 0.39
CRAT-209ENST00000467343 NWD2Q9ULI1 1742 aa17.48■□□□□ 0.39
CRAT-209ENST00000467343 ZBTB7CA1YPR0 619 aa17.48■□□□□ 0.39
CRAT-209ENST00000467343 FAM83GA6ND36 823 aa17.48■□□□□ 0.39
CRAT-209ENST00000467343 ZC3H6P61129 1189 aaKnown RBP17.47■□□□□ 0.39
CRAT-209ENST00000467343 RALGAPBQ86X10 1494 aa17.47■□□□□ 0.39
CRAT-209ENST00000467343 COL14A1Q05707 1796 aaKnown RBP17.46■□□□□ 0.39
CRAT-209ENST00000467343 ZEB1P37275 1124 aaPredicted RBP17.45■□□□□ 0.38
CRAT-209ENST00000467343 CHRNA2Q15822 529 aa17.45■□□□□ 0.38
CRAT-209ENST00000467343 VPS72Q15906 364 aa17.45■□□□□ 0.38
CRAT-209ENST00000467343 PHRF1Q9P1Y6 1649 aaKnown RBP17.45■□□□□ 0.38
CRAT-209ENST00000467343 NLRP13Q86W25 1043 aa17.44■□□□□ 0.38
CRAT-209ENST00000467343 STRN4Q9NRL3 753 aa17.44■□□□□ 0.38
CRAT-209ENST00000467343 KIAA0232Q92628 1395 aa17.43■□□□□ 0.38
CRAT-209ENST00000467343 EVA1CP58658 441 aa17.43■□□□□ 0.38
CRAT-209ENST00000467343 TMC1Q8TDI8 760 aa17.43■□□□□ 0.38
CRAT-209ENST00000467343 GLI3P10071 1580 aa17.43■□□□□ 0.38
CRAT-209ENST00000467343 CRYBG1Q9Y4K1 1723 aa17.42■□□□□ 0.38
CRAT-209ENST00000467343 SRCAPQ6ZRS2 3230 aa17.42■□□□□ 0.38
CRAT-209ENST00000467343 USP6P35125 1406 aa17.41■□□□□ 0.38
CRAT-209ENST00000467343 NLRP6P59044 892 aa17.41■□□□□ 0.38
CRAT-209ENST00000467343 SEPT12Q8IYM1 358 aa17.41■□□□□ 0.38
CRAT-209ENST00000467343 NRAPQ86VF7 1730 aa17.41■□□□□ 0.38
CRAT-209ENST00000467343 FAM98CQ17RN3 349 aaKnown RBP17.4■□□□□ 0.38
CRAT-209ENST00000467343 SOX12O15370 315 aa17.39■□□□□ 0.37
CRAT-209ENST00000467343 ZNF692Q9BU19 519 aaPredicted RBP17.39■□□□□ 0.37
CRAT-209ENST00000467343 BRD4O60885 1362 aaPredicted RBP17.39■□□□□ 0.37
CRAT-209ENST00000467343 NRKQ7Z2Y5 1582 aa17.38■□□□□ 0.37
CRAT-209ENST00000467343 SF3B2Q13435 895 aaKnown RBP17.38■□□□□ 0.37
CRAT-209ENST00000467343 USP35Q9P2H5 1018 aa17.38■□□□□ 0.37
CRAT-209ENST00000467343 KTN1Q86UP2 1357 aaKnown RBP17.38■□□□□ 0.37
CRAT-209ENST00000467343 HDGFL2Q7Z4V5 671 aaPredicted RBP17.37■□□□□ 0.37
CRAT-209ENST00000467343 GCP02774 474 aa17.36■□□□□ 0.37
CRAT-209ENST00000467343 KRT27Q7Z3Y8 459 aa17.36■□□□□ 0.37
CRAT-209ENST00000467343 SBNO2Q9Y2G9 1366 aa17.36■□□□□ 0.37
CRAT-209ENST00000467343 AKAP12Q02952 1782 aa17.35■□□□□ 0.37
CRAT-209ENST00000467343 BRWD3Q6RI45 1802 aa17.35■□□□□ 0.37
CRAT-209ENST00000467343 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.35■□□□□ 0.37
CRAT-209ENST00000467343 ST20-MTHFSA0A0A6YYL1 179 aa17.34■□□□□ 0.37
CRAT-209ENST00000467343 USP19O94966 1318 aa17.34■□□□□ 0.37
CRAT-209ENST00000467343 SPATA31A5Q5VU36 1347 aa17.34■□□□□ 0.37
CRAT-209ENST00000467343 TTC21BQ7Z4L5 1316 aa17.34■□□□□ 0.37
CRAT-209ENST00000467343 SPATA31A7Q8IWB4 1347 aa17.34■□□□□ 0.37
CRAT-209ENST00000467343 TTC21AQ8NDW8 1320 aa17.33■□□□□ 0.36
CRAT-209ENST00000467343 PIK3C2AO00443 1686 aa17.32■□□□□ 0.36
CRAT-209ENST00000467343 TERF2IPQ9NYB0 399 aa17.32■□□□□ 0.36
CRAT-209ENST00000467343 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
CRAT-209ENST00000467343 CCDC125Q86Z20 511 aa17.31■□□□□ 0.36
CRAT-209ENST00000467343 CPDO75976 1380 aa17.3■□□□□ 0.36
CRAT-209ENST00000467343 USP47Q96K76 1375 aa17.3■□□□□ 0.36
CRAT-209ENST00000467343 SPATA31A1Q5TZJ5 1347 aa17.3■□□□□ 0.36
CRAT-209ENST00000467343 KCNH5Q8NCM2 988 aa17.3■□□□□ 0.36
CRAT-209ENST00000467343 SLC12A5Q9H2X9 1139 aa17.3■□□□□ 0.36
CRAT-209ENST00000467343 SSH2Q76I76 1423 aa17.3■□□□□ 0.36
CRAT-209ENST00000467343 CSB-PGBD3P0DP91 1061 aa17.29■□□□□ 0.36
CRAT-209ENST00000467343 TMF1P82094 1093 aa17.29■□□□□ 0.36
CRAT-209ENST00000467343 LARP1Q6PKG0 1096 aaKnown RBP17.29■□□□□ 0.36
CRAT-209ENST00000467343 MON2Q7Z3U7 1717 aa17.29■□□□□ 0.36
CRAT-209ENST00000467343 ONECUT3O60422 494 aaPredicted RBP17.28■□□□□ 0.36
CRAT-209ENST00000467343 CPSF1Q10570 1443 aaKnown RBP17.28■□□□□ 0.36
CRAT-209ENST00000467343 SLIT3O75094 1523 aa17.27■□□□□ 0.36
CRAT-209ENST00000467343 CAMTA1Q9Y6Y1 1673 aa17.27■□□□□ 0.36
CRAT-209ENST00000467343 FAM182BQ5T319 152 aa17.27■□□□□ 0.36
CRAT-209ENST00000467343 TOM1L2Q6ZVM7 507 aa17.27■□□□□ 0.36
CRAT-209ENST00000467343 TIMELESSQ9UNS1 1208 aa17.27■□□□□ 0.36
CRAT-209ENST00000467343 BLMP54132 1417 aaPredicted RBP17.27■□□□□ 0.35
CRAT-209ENST00000467343 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
CRAT-209ENST00000467343 NME9Q86XW9 330 aa17.26■□□□□ 0.35
CRAT-209ENST00000467343 TCP11L2Q8N4U5 519 aa17.26■□□□□ 0.35
CRAT-209ENST00000467343 LMO7Q8WWI1 1683 aa17.26■□□□□ 0.35
CRAT-209ENST00000467343 A0A1W2PP64 1363 aa17.25■□□□□ 0.35
CRAT-209ENST00000467343 COL5A2P05997 1499 aaPredicted RBP17.24■□□□□ 0.35
CRAT-209ENST00000467343 EDC4Q6P2E9 1401 aaKnown RBP17.24■□□□□ 0.35
CRAT-209ENST00000467343 CDCA8Q53HL2 280 aa17.24■□□□□ 0.35
CRAT-209ENST00000467343 PUS7Q96PZ0 661 aaKnown RBP17.24■□□□□ 0.35
CRAT-209ENST00000467343 TESK2Q96S53 571 aa17.24■□□□□ 0.35
CRAT-209ENST00000467343 POLR3GLQ9BT43 218 aa17.24■□□□□ 0.35
CRAT-209ENST00000467343 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
CRAT-209ENST00000467343 AATKQ6ZMQ8 1374 aa17.24■□□□□ 0.35
CRAT-209ENST00000467343 NINLQ9Y2I6 1382 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms