RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ARAP3Q8WWN8 1544 aa9.6□□□□□ -0.87
PTCD3-207ENST00000467273 UGGT2Q9NYU1 1516 aa9.6□□□□□ -0.87
PTCD3-207ENST00000467273 PCF11O94913 1555 aaKnown RBP9.59□□□□□ -0.87
PTCD3-207ENST00000467273 FCHSD2O94868 740 aa9.59□□□□□ -0.87
PTCD3-207ENST00000467273 CD2BP2O95400 341 aaKnown RBP9.59□□□□□ -0.87
PTCD3-207ENST00000467273 KCNV2Q8TDN2 545 aa9.59□□□□□ -0.87
PTCD3-207ENST00000467273 PHLDB1Q86UU1 1377 aa9.59□□□□□ -0.87
PTCD3-207ENST00000467273 TTBK1Q5TCY1 1321 aaPredicted RBP9.58□□□□□ -0.88
PTCD3-207ENST00000467273 AVPP01185 164 aa9.58□□□□□ -0.88
PTCD3-207ENST00000467273 PXYLP1Q8TE99 480 aa9.58□□□□□ -0.88
PTCD3-207ENST00000467273 SOCS7O14512 581 aa9.57□□□□□ -0.88
PTCD3-207ENST00000467273 OATP04181 439 aa9.57□□□□□ -0.88
PTCD3-207ENST00000467273 PRKCSHP14314 528 aaPredicted RBP9.57□□□□□ -0.88
PTCD3-207ENST00000467273 CTC1Q2NKJ3 1217 aa9.57□□□□□ -0.88
PTCD3-207ENST00000467273 RDH13Q8NBN7 331 aa9.57□□□□□ -0.88
PTCD3-207ENST00000467273 KIAA0556O60303 1618 aa9.56□□□□□ -0.88
PTCD3-207ENST00000467273 TTC24A2A3L6 582 aaPredicted RBP9.56□□□□□ -0.88
PTCD3-207ENST00000467273 NFX1Q12986 1120 aaKnown RBP9.55□□□□□ -0.88
PTCD3-207ENST00000467273 STK17AQ9UEE5 414 aa9.55□□□□□ -0.88
PTCD3-207ENST00000467273 PRDM9Q9NQV7 894 aa9.54□□□□□ -0.88
PTCD3-207ENST00000467273 BCORL1Q5H9F3 1711 aa9.53□□□□□ -0.88
PTCD3-207ENST00000467273 FUT2Q10981 343 aa9.53□□□□□ -0.88
PTCD3-207ENST00000467273 MORN1Q5T089 497 aa9.53□□□□□ -0.88
PTCD3-207ENST00000467273 METTL3Q86U44 580 aaKnown RBP9.53□□□□□ -0.88
PTCD3-207ENST00000467273 ZBTB24O43167 697 aaPredicted RBP9.52□□□□□ -0.89
PTCD3-207ENST00000467273 FMNL1O95466 1100 aaPredicted RBP9.52□□□□□ -0.89
PTCD3-207ENST00000467273 INSM1Q01101 510 aaPredicted RBP9.52□□□□□ -0.89
PTCD3-207ENST00000467273 ABCA8O94911 1581 aa9.51□□□□□ -0.89
PTCD3-207ENST00000467273 SUPT5HO00267 1087 aaKnown RBP9.51□□□□□ -0.89
PTCD3-207ENST00000467273 SMCPP49901 116 aaPredicted RBP9.51□□□□□ -0.89
PTCD3-207ENST00000467273 THAP11Q96EK4 314 aa9.51□□□□□ -0.89
PTCD3-207ENST00000467273 GOLGA3Q08378 1498 aa9.51□□□□□ -0.89
PTCD3-207ENST00000467273 MADDQ8WXG6 1647 aa9.5□□□□□ -0.89
PTCD3-207ENST00000467273 DDX11L8A8MPP1 907 aa9.5□□□□□ -0.89
PTCD3-207ENST00000467273 FAM160A2Q8N612 972 aaPredicted RBP9.5□□□□□ -0.89
PTCD3-207ENST00000467273 SLC27A5Q9Y2P5 690 aa9.5□□□□□ -0.89
PTCD3-207ENST00000467273 NEO1Q92859 1461 aa9.49□□□□□ -0.89
PTCD3-207ENST00000467273 RAPGEF2Q9Y4G8 1499 aa9.49□□□□□ -0.89
PTCD3-207ENST00000467273 WIPF1O43516 503 aa9.49□□□□□ -0.89
PTCD3-207ENST00000467273 ATP6V1AP38606 617 aa9.49□□□□□ -0.89
PTCD3-207ENST00000467273 ABCA9Q8IUA7 1624 aa9.49□□□□□ -0.89
PTCD3-207ENST00000467273 DISP3Q9P2K9 1392 aa9.49□□□□□ -0.89
PTCD3-207ENST00000467273 SNRPBP14678 240 aaKnown RBP9.48□□□□□ -0.89
PTCD3-207ENST00000467273 ATP13A2Q9NQ11 1180 aa9.48□□□□□ -0.89
PTCD3-207ENST00000467273 HIC1Q14526 733 aa9.47□□□□□ -0.89
PTCD3-207ENST00000467273 TPRNQ4KMQ1 711 aa9.47□□□□□ -0.89
PTCD3-207ENST00000467273 NLRP7Q8WX94 980 aa9.47□□□□□ -0.89
PTCD3-207ENST00000467273 SEMA3EO15041 775 aa9.46□□□□□ -0.9
PTCD3-207ENST00000467273 SMPD1P17405 629 aa9.46□□□□□ -0.9
PTCD3-207ENST00000467273 FECHP22830 423 aa9.46□□□□□ -0.9
PTCD3-207ENST00000467273 ILDR2Q71H61 639 aa9.46□□□□□ -0.9
PTCD3-207ENST00000467273 DAXXQ9UER7 740 aaPredicted RBP9.46□□□□□ -0.9
PTCD3-207ENST00000467273 CTTNBP2Q8WZ74 1663 aa9.45□□□□□ -0.9
PTCD3-207ENST00000467273 WNT7AO00755 349 aa9.45□□□□□ -0.9
PTCD3-207ENST00000467273 SNIP1Q8TAD8 396 aaKnown RBP9.45□□□□□ -0.9
PTCD3-207ENST00000467273 POGZQ7Z3K3 1410 aa9.45□□□□□ -0.9
PTCD3-207ENST00000467273 ARHGEF40Q8TER5 1519 aa9.45□□□□□ -0.9
PTCD3-207ENST00000467273 RIMS1Q86UR5 1692 aaKnown RBP9.45□□□□□ -0.9
PTCD3-207ENST00000467273 TERTO14746 1132 aaKnown RBP9.44□□□□□ -0.9
PTCD3-207ENST00000467273 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
PTCD3-207ENST00000467273 RNF19BQ6ZMZ0 732 aa9.44□□□□□ -0.9
PTCD3-207ENST00000467273 FAM9AQ8IZU1 332 aaPredicted RBP9.44□□□□□ -0.9
PTCD3-207ENST00000467273 FRMPD1Q5SYB0 1578 aa9.44□□□□□ -0.9
PTCD3-207ENST00000467273 SPATA31D1Q6ZQQ2 1576 aa9.44□□□□□ -0.9
PTCD3-207ENST00000467273 ARID4BQ4LE39 1312 aaPredicted RBP9.43□□□□□ -0.9
PTCD3-207ENST00000467273 J3QL48 77 aa9.43□□□□□ -0.9
PTCD3-207ENST00000467273 TRIM32Q13049 653 aa9.43□□□□□ -0.9
PTCD3-207ENST00000467273 BRICD5Q6PL45 260 aa9.43□□□□□ -0.9
PTCD3-207ENST00000467273 MRGPRX2Q96LB1 330 aa9.43□□□□□ -0.9
PTCD3-207ENST00000467273 TRIM47Q96LD4 638 aa9.43□□□□□ -0.9
PTCD3-207ENST00000467273 SENP2Q9HC62 589 aa9.43□□□□□ -0.9
PTCD3-207ENST00000467273 FANCAO15360 1455 aa9.42□□□□□ -0.9
PTCD3-207ENST00000467273 RAPGEF3O95398 923 aa9.42□□□□□ -0.9
PTCD3-207ENST00000467273 GCGRP47871 477 aa9.42□□□□□ -0.9
PTCD3-207ENST00000467273 MSS51Q4VC12 460 aa9.42□□□□□ -0.9
PTCD3-207ENST00000467273 SULF1Q8IWU6 871 aa9.41□□□□□ -0.9
PTCD3-207ENST00000467273 SALL2Q9Y467 1007 aaPredicted RBP9.41□□□□□ -0.9
PTCD3-207ENST00000467273 TTC37Q6PGP7 1564 aa9.41□□□□□ -0.9
PTCD3-207ENST00000467273 ATP10BO94823 1461 aa9.4□□□□□ -0.9
PTCD3-207ENST00000467273 HSPA2P54652 639 aa9.4□□□□□ -0.9
PTCD3-207ENST00000467273 RBM26Q5T8P6 1007 aaKnown RBP9.4□□□□□ -0.9
PTCD3-207ENST00000467273 P3H3Q8IVL6 736 aa9.4□□□□□ -0.9
PTCD3-207ENST00000467273 CFAP74Q9C0B2 1584 aa9.4□□□□□ -0.9
PTCD3-207ENST00000467273 ZMYM4Q5VZL5 1548 aa9.4□□□□□ -0.91
PTCD3-207ENST00000467273 MAGI2Q86UL8 1455 aa9.4□□□□□ -0.91
PTCD3-207ENST00000467273 FHOD3Q2V2M9 1422 aa9.39□□□□□ -0.91
PTCD3-207ENST00000467273 AKNAQ7Z591 1439 aa9.39□□□□□ -0.91
PTCD3-207ENST00000467273 RICTORQ6R327 1708 aa9.39□□□□□ -0.91
PTCD3-207ENST00000467273 GNPATO15228 680 aa9.39□□□□□ -0.91
PTCD3-207ENST00000467273 HPS1Q92902 700 aa9.39□□□□□ -0.91
PTCD3-207ENST00000467273 DENND4BO75064 1496 aaPredicted RBP9.39□□□□□ -0.91
PTCD3-207ENST00000467273 IQSEC2Q5JU85 1478 aa9.39□□□□□ -0.91
PTCD3-207ENST00000467273 YEATS2Q9ULM3 1422 aa9.39□□□□□ -0.91
PTCD3-207ENST00000467273 PREX1Q8TCU6 1659 aa9.39□□□□□ -0.91
PTCD3-207ENST00000467273 EFCAB5A4FU69 1503 aa9.38□□□□□ -0.91
PTCD3-207ENST00000467273 GRIPAP1Q4V328 841 aa9.38□□□□□ -0.91
PTCD3-207ENST00000467273 KIFC2Q96AC6 838 aa9.37□□□□□ -0.91
PTCD3-207ENST00000467273 REPIN1Q9BWE0 567 aaKnown RBP9.37□□□□□ -0.91
PTCD3-207ENST00000467273 FER1L4A9Z1Z3 1794 aa9.37□□□□□ -0.91
PTCD3-207ENST00000467273 CCDC24Q8N4L8 307 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms