RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-216ENST00000467134 USP31Q70CQ4 1352 aa14.8□□□□□ -0.04
MUC1-216ENST00000467134 OVOS2A0A0J9YW53 1432 aa14.8□□□□□ -0.04
MUC1-216ENST00000467134 OVOS2Q6IE36 1432 aa14.8□□□□□ -0.04
MUC1-216ENST00000467134 MARF1Q9Y4F3 1742 aaKnown RBP14.8□□□□□ -0.04
MUC1-216ENST00000467134 TMEM94Q12767 1356 aa14.79□□□□□ -0.04
MUC1-216ENST00000467134 YTHDC1Q96MU7 727 aaKnown RBP14.79□□□□□ -0.04
MUC1-216ENST00000467134 TRPM3Q9HCF6 1732 aaPredicted RBP14.78□□□□□ -0.04
MUC1-216ENST00000467134 MST1RQ04912 1400 aa14.78□□□□□ -0.04
MUC1-216ENST00000467134 TTC21BQ7Z4L5 1316 aa14.78□□□□□ -0.04
MUC1-216ENST00000467134 COL3A1P02461 1466 aaPredicted RBP14.77□□□□□ -0.04
MUC1-216ENST00000467134 C1orf167Q5SNV9 1468 aa14.77□□□□□ -0.04
MUC1-216ENST00000467134 CDK12Q9NYV4 1490 aaPredicted RBP14.77□□□□□ -0.04
MUC1-216ENST00000467134 MSH6P52701 1360 aa14.76□□□□□ -0.05
MUC1-216ENST00000467134 PNPLA6Q8IY17 1366 aa14.76□□□□□ -0.05
MUC1-216ENST00000467134 ZBED9Q6R2W3 1325 aa14.76□□□□□ -0.05
MUC1-216ENST00000467134 CFAP53Q96M91 514 aa14.76□□□□□ -0.05
MUC1-216ENST00000467134 PHF8Q9UPP1 1060 aa14.76□□□□□ -0.05
MUC1-216ENST00000467134 PHRF1Q9P1Y6 1649 aaKnown RBP14.75□□□□□ -0.05
MUC1-216ENST00000467134 CNGB1Q14028 1251 aaPredicted RBP14.75□□□□□ -0.05
MUC1-216ENST00000467134 FAM9BQ8IZU0 186 aa14.75□□□□□ -0.05
MUC1-216ENST00000467134 C14orf37Q86TY3 774 aa14.74□□□□□ -0.05
MUC1-216ENST00000467134 CADPS2Q86UW7 1296 aa14.74□□□□□ -0.05
MUC1-216ENST00000467134 NGDNQ8NEJ9 315 aaKnown RBP14.74□□□□□ -0.05
MUC1-216ENST00000467134 GGNBP2Q9H3C7 697 aa14.74□□□□□ -0.05
MUC1-216ENST00000467134 HNRNPUQ00839 825 aaKnown RBP eCLIP14.73□□□□□ -0.05
MUC1-216ENST00000467134 COG3Q96JB2 828 aa14.73□□□□□ -0.05
MUC1-216ENST00000467134 ALS2Q96Q42 1657 aa14.73□□□□□ -0.05
MUC1-216ENST00000467134 KIF24Q5T7B8 1368 aa14.73□□□□□ -0.05
MUC1-216ENST00000467134 WDR43Q15061 677 aaKnown RBP eCLIP14.72□□□□□ -0.05
MUC1-216ENST00000467134 NGEFQ8N5V2 710 aa14.72□□□□□ -0.05
MUC1-216ENST00000467134 ATF3P18847 181 aa14.71□□□□□ -0.05
MUC1-216ENST00000467134 MTHFSP49914 203 aa14.71□□□□□ -0.05
MUC1-216ENST00000467134 NME9Q86XW9 330 aa14.71□□□□□ -0.05
MUC1-216ENST00000467134 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.71□□□□□ -0.05
MUC1-216ENST00000467134 NCBP3Q53F19 620 aaKnown RBP14.7□□□□□ -0.06
MUC1-216ENST00000467134 NUTM2FA1L443 756 aa14.69□□□□□ -0.06
MUC1-216ENST00000467134 PMFBP1Q8TBY8 1022 aa14.69□□□□□ -0.06
MUC1-216ENST00000467134 SLIT3O75094 1523 aa14.69□□□□□ -0.06
MUC1-216ENST00000467134 ZNF335Q9H4Z2 1342 aaPredicted RBP14.68□□□□□ -0.06
MUC1-216ENST00000467134 LTBP4Q8N2S1 1624 aa14.68□□□□□ -0.06
MUC1-216ENST00000467134 NHSL1Q5SYE7 1610 aa14.67□□□□□ -0.06
MUC1-216ENST00000467134 PEAK1Q9H792 1746 aa14.67□□□□□ -0.06
MUC1-216ENST00000467134 ESCO1Q5FWF5 840 aa14.67□□□□□ -0.06
MUC1-216ENST00000467134 POLKQ9UBT6 870 aa14.67□□□□□ -0.06
MUC1-216ENST00000467134 SBNO1A3KN83 1393 aa14.67□□□□□ -0.06
MUC1-216ENST00000467134 MED1Q15648 1581 aaPredicted RBP14.67□□□□□ -0.06
MUC1-216ENST00000467134 NFAT5O94916 1531 aa14.66□□□□□ -0.06
MUC1-216ENST00000467134 RGPD1P0DJD0 1748 aa14.66□□□□□ -0.06
MUC1-216ENST00000467134 LTN1O94822 1766 aa14.66□□□□□ -0.06
MUC1-216ENST00000467134 IQSEC2Q5JU85 1478 aa14.66□□□□□ -0.06
MUC1-216ENST00000467134 ADAMTS8Q9UP79 889 aa14.66□□□□□ -0.06
MUC1-216ENST00000467134 NUDCQ9Y266 331 aa14.66□□□□□ -0.06
MUC1-216ENST00000467134 CRYBG1Q9Y4K1 1723 aa14.66□□□□□ -0.06
MUC1-216ENST00000467134 PXDNQ92626 1479 aa14.65□□□□□ -0.06
MUC1-216ENST00000467134 RTL1A6NKG5 1358 aa14.65□□□□□ -0.06
MUC1-216ENST00000467134 RBM33Q96EV2 1170 aaKnown RBP14.65□□□□□ -0.06
MUC1-216ENST00000467134 ABCC6O95255 1503 aa14.65□□□□□ -0.06
MUC1-216ENST00000467134 TNNT2P45379 298 aaPredicted RBP14.64□□□□□ -0.07
MUC1-216ENST00000467134 PDE3BQ13370 1112 aa14.64□□□□□ -0.07
MUC1-216ENST00000467134 NPHP3Q7Z494 1330 aa14.64□□□□□ -0.07
MUC1-216ENST00000467134 PSME1Q06323 249 aa14.63□□□□□ -0.07
MUC1-216ENST00000467134 DIAPH1O60610 1272 aaKnown RBP14.62□□□□□ -0.07
MUC1-216ENST00000467134 ORAI2Q96SN7 254 aa14.62□□□□□ -0.07
MUC1-216ENST00000467134 PNNQ9H307 717 aaKnown RBP14.62□□□□□ -0.07
MUC1-216ENST00000467134 ZRANB1Q9UGI0 708 aa14.62□□□□□ -0.07
MUC1-216ENST00000467134 USP19O94966 1318 aa14.62□□□□□ -0.07
MUC1-216ENST00000467134 FLT4P35916 1363 aa14.61□□□□□ -0.07
MUC1-216ENST00000467134 TNS3Q68CZ2 1445 aa14.6□□□□□ -0.07
MUC1-216ENST00000467134 KCNH5Q8NCM2 988 aa14.6□□□□□ -0.07
MUC1-216ENST00000467134 RUNDC1Q96C34 613 aa14.6□□□□□ -0.07
MUC1-216ENST00000467134 NLRP6P59044 892 aa14.59□□□□□ -0.07
MUC1-216ENST00000467134 KRT28Q7Z3Y7 464 aa14.59□□□□□ -0.07
MUC1-216ENST00000467134 ABTB2Q8N961 1025 aa14.59□□□□□ -0.07
MUC1-216ENST00000467134 ARHGEF10O15013 1369 aa14.59□□□□□ -0.07
MUC1-216ENST00000467134 AHDC1Q5TGY3 1603 aaPredicted RBP14.59□□□□□ -0.07
MUC1-216ENST00000467134 FOXO3O43524 673 aa14.58□□□□□ -0.08
MUC1-216ENST00000467134 EMILIN1Q9Y6C2 1016 aa14.58□□□□□ -0.08
MUC1-216ENST00000467134 ZNF521Q96K83 1311 aa14.58□□□□□ -0.08
MUC1-216ENST00000467134 FAM208AQ9UK61 1670 aaKnown RBP14.58□□□□□ -0.08
MUC1-216ENST00000467134 FCHSD2O94868 740 aa14.57□□□□□ -0.08
MUC1-216ENST00000467134 IL13P35225 146 aa14.57□□□□□ -0.08
MUC1-216ENST00000467134 CCDC27Q2M243 656 aa14.57□□□□□ -0.08
MUC1-216ENST00000467134 SLAIN2Q9P270 581 aa14.57□□□□□ -0.08
MUC1-216ENST00000467134 CAMTA1Q9Y6Y1 1673 aa14.57□□□□□ -0.08
MUC1-216ENST00000467134 MAP3K19Q56UN5 1328 aa14.57□□□□□ -0.08
MUC1-216ENST00000467134 ABCA3Q99758 1704 aa14.57□□□□□ -0.08
MUC1-216ENST00000467134 U2AF1L5P0DN76 240 aaPredicted RBP14.56□□□□□ -0.08
MUC1-216ENST00000467134 U2AF1Q01081 240 aaKnown RBP eCLIP14.56□□□□□ -0.08
MUC1-216ENST00000467134 BRINP3Q76B58 766 aa14.56□□□□□ -0.08
MUC1-216ENST00000467134 SOS2Q07890 1332 aaPredicted RBP14.56□□□□□ -0.08
MUC1-216ENST00000467134 PAK3O75914 559 aaPredicted RBP14.55□□□□□ -0.08
MUC1-216ENST00000467134 PHF23Q9BUL5 403 aaPredicted RBP14.55□□□□□ -0.08
MUC1-216ENST00000467134 RRS1Q15050 365 aaKnown RBP14.54□□□□□ -0.08
MUC1-216ENST00000467134 PLEKHF1Q96S99 279 aa14.54□□□□□ -0.08
MUC1-216ENST00000467134 SPATA31A3Q5VYP0 1347 aa14.54□□□□□ -0.08
MUC1-216ENST00000467134 ROBO1Q9Y6N7 1651 aa14.54□□□□□ -0.08
MUC1-216ENST00000467134 COL18A1P39060 1754 aa14.53□□□□□ -0.08
MUC1-216ENST00000467134 COL22A1Q8NFW1 1626 aaPredicted RBP14.53□□□□□ -0.08
MUC1-216ENST00000467134 KDRP35968 1356 aa14.53□□□□□ -0.08
MUC1-216ENST00000467134 NCAPD2Q15021 1401 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms