RNA–Protein interactions for RNA: ENST00000467105.1

RPL3-212, Transcript of ribosomal protein L3, humanhuman

TSL 1 (best)

Gene RPL3, Length 1,396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-212ENST00000467105 NUDT16Q96DE0 195 aaKnown RBP20.68■□□□□ 0.9
RPL3-212ENST00000467105 ALS2Q96Q42 1657 aa20.67■□□□□ 0.9
RPL3-212ENST00000467105 A0A0G2JS52 829 aa20.67■□□□□ 0.9
RPL3-212ENST00000467105 MYT1Q01538 1121 aa20.67■□□□□ 0.9
RPL3-212ENST00000467105 SF3B2Q13435 895 aaKnown RBP20.65■□□□□ 0.9
RPL3-212ENST00000467105 ATP7BP35670 1465 aa20.65■□□□□ 0.9
RPL3-212ENST00000467105 CDK19Q9BWU1 502 aa20.64■□□□□ 0.89
RPL3-212ENST00000467105 PRDM11Q9NQV5 511 aa20.63■□□□□ 0.89
RPL3-212ENST00000467105 NRAPQ86VF7 1730 aa20.63■□□□□ 0.89
RPL3-212ENST00000467105 ARHGEF28Q8N1W1 1705 aaKnown RBP20.62■□□□□ 0.89
RPL3-212ENST00000467105 SPATA31A5Q5VU36 1347 aa20.62■□□□□ 0.89
RPL3-212ENST00000467105 SPATA31A7Q8IWB4 1347 aa20.62■□□□□ 0.89
RPL3-212ENST00000467105 COL14A1Q05707 1796 aaKnown RBP20.61■□□□□ 0.89
RPL3-212ENST00000467105 NBPF1Q3BBV0 1214 aa20.6■□□□□ 0.89
RPL3-212ENST00000467105 NUTM2GQ5VZR2 741 aa20.6■□□□□ 0.89
RPL3-212ENST00000467105 CHRNA2Q15822 529 aa20.59■□□□□ 0.89
RPL3-212ENST00000467105 FAM182BQ5T319 152 aa20.59■□□□□ 0.89
RPL3-212ENST00000467105 KIAA0232Q92628 1395 aa20.59■□□□□ 0.89
RPL3-212ENST00000467105 NBPF8Q3BBV2 869 aa20.59■□□□□ 0.89
RPL3-212ENST00000467105 CCDC61Q9Y6R9 512 aa20.59■□□□□ 0.89
RPL3-212ENST00000467105 ACEP12821 1306 aa20.58■□□□□ 0.89
RPL3-212ENST00000467105 CRYBG1Q9Y4K1 1723 aa20.58■□□□□ 0.89
RPL3-212ENST00000467105 POLR3AO14802 1390 aaPredicted RBP20.57■□□□□ 0.88
RPL3-212ENST00000467105 ZC3H6P61129 1189 aaKnown RBP20.57■□□□□ 0.88
RPL3-212ENST00000467105 PLEKHG3A1L390 1219 aa20.56■□□□□ 0.88
RPL3-212ENST00000467105 BAG6P46379 1132 aa20.55■□□□□ 0.88
RPL3-212ENST00000467105 STRN4Q9NRL3 753 aa20.55■□□□□ 0.88
RPL3-212ENST00000467105 ITSN1Q15811 1721 aa20.55■□□□□ 0.88
RPL3-212ENST00000467105 SPATA31A1Q5TZJ5 1347 aa20.54■□□□□ 0.88
RPL3-212ENST00000467105 EN1Q05925 392 aaPredicted RBP20.53■□□□□ 0.88
RPL3-212ENST00000467105 PSDA5PKW4 1024 aaPredicted RBP20.52■□□□□ 0.88
RPL3-212ENST00000467105 THSD7AQ9UPZ6 1657 aa20.51■□□□□ 0.87
RPL3-212ENST00000467105 ABTB2Q8N961 1025 aa20.51■□□□□ 0.87
RPL3-212ENST00000467105 KIAA1210Q9ULL0 1709 aa20.51■□□□□ 0.87
RPL3-212ENST00000467105 TOPAZ1Q8N9V7 1692 aa20.5■□□□□ 0.87
RPL3-212ENST00000467105 SRPK2P78362 688 aaKnown RBP20.5■□□□□ 0.87
RPL3-212ENST00000467105 CABP2Q9NPB3 220 aa20.5■□□□□ 0.87
RPL3-212ENST00000467105 CENPJQ9HC77 1338 aaPredicted RBP20.5■□□□□ 0.87
RPL3-212ENST00000467105 PHRF1Q9P1Y6 1649 aaKnown RBP20.5■□□□□ 0.87
RPL3-212ENST00000467105 USP35Q9P2H5 1018 aa20.49■□□□□ 0.87
RPL3-212ENST00000467105 EVA1CP58658 441 aa20.47■□□□□ 0.87
RPL3-212ENST00000467105 USP19O94966 1318 aa20.47■□□□□ 0.87
RPL3-212ENST00000467105 PPIP5K1Q6PFW1 1433 aa20.47■□□□□ 0.87
RPL3-212ENST00000467105 SSH2Q76I76 1423 aa20.47■□□□□ 0.87
RPL3-212ENST00000467105 LARP1Q6PKG0 1096 aaKnown RBP20.46■□□□□ 0.87
RPL3-212ENST00000467105 CAMTA1Q9Y6Y1 1673 aa20.46■□□□□ 0.87
RPL3-212ENST00000467105 NRKQ7Z2Y5 1582 aa20.45■□□□□ 0.86
RPL3-212ENST00000467105 CPDO75976 1380 aa20.45■□□□□ 0.86
RPL3-212ENST00000467105 TRIM37O94972 964 aa20.45■□□□□ 0.86
RPL3-212ENST00000467105 GCP02774 474 aa20.45■□□□□ 0.86
RPL3-212ENST00000467105 FAM196AQ6ZSG2 479 aa20.45■□□□□ 0.86
RPL3-212ENST00000467105 BARGINQ6ZT62 677 aa20.45■□□□□ 0.86
RPL3-212ENST00000467105 L3MBTL2Q969R5 705 aa20.45■□□□□ 0.86
RPL3-212ENST00000467105 EZH2Q15910 746 aaKnown RBP20.44■□□□□ 0.86
RPL3-212ENST00000467105 NLRP13Q86W25 1043 aa20.44■□□□□ 0.86
RPL3-212ENST00000467105 CABP1Q9NZU7 370 aa20.44■□□□□ 0.86
RPL3-212ENST00000467105 DISP2A7MBM2 1401 aa20.43■□□□□ 0.86
RPL3-212ENST00000467105 RGPD1P0DJD0 1748 aa20.43■□□□□ 0.86
RPL3-212ENST00000467105 R3HDM1Q15032 1099 aaKnown RBP20.42■□□□□ 0.86
RPL3-212ENST00000467105 TCP11L2Q8N4U5 519 aa20.42■□□□□ 0.86
RPL3-212ENST00000467105 PDE3BQ13370 1112 aa20.41■□□□□ 0.86
RPL3-212ENST00000467105 CAMKK2Q96RR4 588 aa20.41■□□□□ 0.86
RPL3-212ENST00000467105 SIN3AQ96ST3 1273 aa20.41■□□□□ 0.86
RPL3-212ENST00000467105 LMO7Q8WWI1 1683 aa20.39■□□□□ 0.85
RPL3-212ENST00000467105 APBA3O96018 575 aa20.39■□□□□ 0.85
RPL3-212ENST00000467105 TNS1Q9HBL0 1735 aaKnown RBP20.39■□□□□ 0.85
RPL3-212ENST00000467105 LRP5O75197 1615 aa20.39■□□□□ 0.85
RPL3-212ENST00000467105 USP6P35125 1406 aa20.38■□□□□ 0.85
RPL3-212ENST00000467105 NLRP6P59044 892 aa20.38■□□□□ 0.85
RPL3-212ENST00000467105 BRD4O60885 1362 aaPredicted RBP20.38■□□□□ 0.85
RPL3-212ENST00000467105 ZBTB7CA1YPR0 619 aa20.37■□□□□ 0.85
RPL3-212ENST00000467105 QRICH2Q9H0J4 1663 aa20.36■□□□□ 0.85
RPL3-212ENST00000467105 THRAP3Q9Y2W1 955 aaKnown RBP20.36■□□□□ 0.85
RPL3-212ENST00000467105 COL5A2P05997 1499 aaPredicted RBP20.36■□□□□ 0.85
RPL3-212ENST00000467105 NEUROD1Q13562 356 aa20.34■□□□□ 0.85
RPL3-212ENST00000467105 EVC2Q86UK5 1308 aa20.34■□□□□ 0.85
RPL3-212ENST00000467105 AATKQ6ZMQ8 1374 aa20.33■□□□□ 0.84
RPL3-212ENST00000467105 CRB1P82279 1406 aa20.32■□□□□ 0.84
RPL3-212ENST00000467105 PARD3Q8TEW0 1356 aa20.32■□□□□ 0.84
RPL3-212ENST00000467105 SLIT3O75094 1523 aa20.31■□□□□ 0.84
RPL3-212ENST00000467105 ROCK2O75116 1388 aaKnown RBP20.31■□□□□ 0.84
RPL3-212ENST00000467105 AXIN2Q9Y2T1 843 aa20.31■□□□□ 0.84
RPL3-212ENST00000467105 TRPM1Q7Z4N2 1603 aa20.29■□□□□ 0.84
RPL3-212ENST00000467105 TTC21BQ7Z4L5 1316 aa20.29■□□□□ 0.84
RPL3-212ENST00000467105 TOM1L2Q6ZVM7 507 aa20.28■□□□□ 0.84
RPL3-212ENST00000467105 ZNF692Q9BU19 519 aaPredicted RBP20.28■□□□□ 0.84
RPL3-212ENST00000467105 PIK3C2AO00443 1686 aa20.27■□□□□ 0.84
RPL3-212ENST00000467105 SOX12O15370 315 aa20.27■□□□□ 0.84
RPL3-212ENST00000467105 ARHGEF25Q86VW2 580 aa20.26■□□□□ 0.83
RPL3-212ENST00000467105 PARP4Q9UKK3 1724 aaKnown RBP20.26■□□□□ 0.83
RPL3-212ENST00000467105 WDR17Q8IZU2 1322 aa20.25■□□□□ 0.83
RPL3-212ENST00000467105 DDB1Q16531 1140 aa20.25■□□□□ 0.83
RPL3-212ENST00000467105 CPSF1Q10570 1443 aaKnown RBP20.24■□□□□ 0.83
RPL3-212ENST00000467105 NBPF14Q5TI25 921 aa20.24■□□□□ 0.83
RPL3-212ENST00000467105 COL18A1P39060 1754 aa20.24■□□□□ 0.83
RPL3-212ENST00000467105 OVOS2A0A0G2JMS6 1433 aa20.24■□□□□ 0.83
RPL3-212ENST00000467105 OVOS2A0A0J9YW53 1432 aa20.24■□□□□ 0.83
RPL3-212ENST00000467105 OVOS2Q6IE36 1432 aa20.24■□□□□ 0.83
RPL3-212ENST00000467105 PTF1AQ7RTS3 328 aa20.23■□□□□ 0.83
RPL3-212ENST00000467105 KCNH5Q8NCM2 988 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms