RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 KIF2CQ99661 725 aa13.7□□□□□ -0.22
SFXN3-204ENST00000466982 RBSNQ9H1K0 784 aa13.69□□□□□ -0.22
SFXN3-204ENST00000466982 CIZ1Q9ULV3 898 aaPredicted RBP13.69□□□□□ -0.22
SFXN3-204ENST00000466982 NOL7Q9UMY1 257 aaKnown RBP13.69□□□□□ -0.22
SFXN3-204ENST00000466982 ITSN2Q9NZM3 1697 aa13.69□□□□□ -0.22
SFXN3-204ENST00000466982 AK9Q5TCS8 1911 aa13.69□□□□□ -0.22
SFXN3-204ENST00000466982 GAS2L2Q8NHY3 880 aa13.69□□□□□ -0.22
SFXN3-204ENST00000466982 CLGNO14967 610 aa13.68□□□□□ -0.22
SFXN3-204ENST00000466982 CAVIN1Q6NZI2 390 aaKnown RBP13.68□□□□□ -0.22
SFXN3-204ENST00000466982 ZNF500O60304 480 aaPredicted RBP13.67□□□□□ -0.22
SFXN3-204ENST00000466982 KLHL40Q2TBA0 621 aa13.67□□□□□ -0.22
SFXN3-204ENST00000466982 SLC52A1Q9NWF4 448 aa13.67□□□□□ -0.22
SFXN3-204ENST00000466982 HDAC5Q9UQL6 1122 aa13.67□□□□□ -0.22
SFXN3-204ENST00000466982 BAG4O95429 457 aaKnown RBP13.67□□□□□ -0.22
SFXN3-204ENST00000466982 MAPK8IP2Q13387 824 aaPredicted RBP13.67□□□□□ -0.22
SFXN3-204ENST00000466982 TCP11L2Q8N4U5 519 aa13.67□□□□□ -0.22
SFXN3-204ENST00000466982 PLXNC1O60486 1568 aa13.67□□□□□ -0.22
SFXN3-204ENST00000466982 TSC1Q92574 1164 aa13.66□□□□□ -0.22
SFXN3-204ENST00000466982 CDC42BPAQ5VT25 1732 aa13.66□□□□□ -0.22
SFXN3-204ENST00000466982 CARD14Q9BXL6 1004 aa13.66□□□□□ -0.22
SFXN3-204ENST00000466982 CGNQ9P2M7 1197 aaKnown RBP13.66□□□□□ -0.22
SFXN3-204ENST00000466982 LAMC1P11047 1609 aa13.66□□□□□ -0.22
SFXN3-204ENST00000466982 PRIM1P49642 420 aaKnown RBP13.66□□□□□ -0.22
SFXN3-204ENST00000466982 IRX5P78411 483 aaPredicted RBP13.66□□□□□ -0.22
SFXN3-204ENST00000466982 MCTP1Q6DN14 999 aa13.66□□□□□ -0.22
SFXN3-204ENST00000466982 LNPKQ9C0E8 428 aa13.66□□□□□ -0.22
SFXN3-204ENST00000466982 ZSCAN23Q3MJ62 389 aa13.65□□□□□ -0.22
SFXN3-204ENST00000466982 DZIP1LQ8IYY4 767 aaKnown RBP13.65□□□□□ -0.22
SFXN3-204ENST00000466982 DNAJC2Q99543 621 aaKnown RBP13.65□□□□□ -0.22
SFXN3-204ENST00000466982 PSEN1P49768 467 aa13.65□□□□□ -0.22
SFXN3-204ENST00000466982 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.64□□□□□ -0.23
SFXN3-204ENST00000466982 K7ELQ4 463 aaPredicted RBP13.64□□□□□ -0.23
SFXN3-204ENST00000466982 PDLIM2Q96JY6 352 aa13.64□□□□□ -0.23
SFXN3-204ENST00000466982 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
SFXN3-204ENST00000466982 MYO5CQ9NQX4 1742 aa13.64□□□□□ -0.23
SFXN3-204ENST00000466982 GOLGA6L22H0YM25 854 aa13.64□□□□□ -0.23
SFXN3-204ENST00000466982 ZKSCAN2Q63HK3 967 aa13.64□□□□□ -0.23
SFXN3-204ENST00000466982 CERS3Q8IU89 383 aa13.64□□□□□ -0.23
SFXN3-204ENST00000466982 ZKSCAN5Q9Y2L8 839 aa13.64□□□□□ -0.23
SFXN3-204ENST00000466982 ZNF445P59923 1031 aa13.63□□□□□ -0.23
SFXN3-204ENST00000466982 PKP1Q13835 747 aa13.63□□□□□ -0.23
SFXN3-204ENST00000466982 ITPRIPQ8IWB1 547 aa13.63□□□□□ -0.23
SFXN3-204ENST00000466982 TTC37Q6PGP7 1564 aa13.63□□□□□ -0.23
SFXN3-204ENST00000466982 CHAMP1Q96JM3 812 aa13.63□□□□□ -0.23
SFXN3-204ENST00000466982 CCDC141Q6ZP82 1450 aa13.63□□□□□ -0.23
SFXN3-204ENST00000466982 PTMSP20962 102 aa13.62□□□□□ -0.23
SFXN3-204ENST00000466982 NGEFQ8N5V2 710 aa13.62□□□□□ -0.23
SFXN3-204ENST00000466982 TSR2Q969E8 191 aaKnown RBP13.62□□□□□ -0.23
SFXN3-204ENST00000466982 TRIM27P14373 513 aa13.62□□□□□ -0.23
SFXN3-204ENST00000466982 HDAC1Q13547 482 aaPredicted RBP13.62□□□□□ -0.23
SFXN3-204ENST00000466982 HS1BP3Q53T59 392 aa13.62□□□□□ -0.23
SFXN3-204ENST00000466982 IBTKQ9P2D0 1353 aaPredicted RBP13.62□□□□□ -0.23
SFXN3-204ENST00000466982 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
SFXN3-204ENST00000466982 FAM69CQ0P6D2 419 aa13.61□□□□□ -0.23
SFXN3-204ENST00000466982 CDCA8Q53HL2 280 aa13.61□□□□□ -0.23
SFXN3-204ENST00000466982 RUNDC1Q96C34 613 aa13.61□□□□□ -0.23
SFXN3-204ENST00000466982 SYNMO15061 1565 aa13.61□□□□□ -0.23
SFXN3-204ENST00000466982 FAM177BA6PVY3 158 aa13.6□□□□□ -0.23
SFXN3-204ENST00000466982 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
SFXN3-204ENST00000466982 SASS6Q6UVJ0 657 aa13.6□□□□□ -0.23
SFXN3-204ENST00000466982 MPNDQ8N594 471 aa13.6□□□□□ -0.23
SFXN3-204ENST00000466982 LMBRD1Q9NUN5 540 aa13.6□□□□□ -0.23
SFXN3-204ENST00000466982 NPC1L1Q9UHC9 1359 aa13.6□□□□□ -0.23
SFXN3-204ENST00000466982 CBX1P83916 185 aa13.6□□□□□ -0.23
SFXN3-204ENST00000466982 SOX12O15370 315 aa13.6□□□□□ -0.23
SFXN3-204ENST00000466982 FAM193AP78312 1265 aa13.6□□□□□ -0.23
SFXN3-204ENST00000466982 PHF23Q9BUL5 403 aaPredicted RBP13.6□□□□□ -0.23
SFXN3-204ENST00000466982 ARHGAP5Q13017 1502 aa13.59□□□□□ -0.23
SFXN3-204ENST00000466982 CLEC17AQ6ZS10 378 aa13.59□□□□□ -0.23
SFXN3-204ENST00000466982 SCAPERQ9BY12 1400 aa13.59□□□□□ -0.23
SFXN3-204ENST00000466982 SMC4Q9NTJ3 1288 aa13.59□□□□□ -0.23
SFXN3-204ENST00000466982 EIF2AK4Q9P2K8 1649 aaKnown RBP13.59□□□□□ -0.23
SFXN3-204ENST00000466982 APPP05067 770 aa13.59□□□□□ -0.23
SFXN3-204ENST00000466982 RNF214Q8ND24 703 aa13.59□□□□□ -0.23
SFXN3-204ENST00000466982 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.23
SFXN3-204ENST00000466982 MYOM1P52179 1685 aa13.58□□□□□ -0.23
SFXN3-204ENST00000466982 PRPF40AO75400 957 aaKnown RBP13.58□□□□□ -0.24
SFXN3-204ENST00000466982 AXDND1Q5T1B0 1012 aaPredicted RBP13.58□□□□□ -0.24
SFXN3-204ENST00000466982 EFCAB2Q5VUJ9 269 aa13.58□□□□□ -0.24
SFXN3-204ENST00000466982 WDR63Q8IWG1 891 aa13.58□□□□□ -0.24
SFXN3-204ENST00000466982 GPT2Q8TD30 523 aa13.58□□□□□ -0.24
SFXN3-204ENST00000466982 NUCB1Q02818 461 aa13.58□□□□□ -0.24
SFXN3-204ENST00000466982 CSPP1Q1MSJ5 1256 aa13.58□□□□□ -0.24
SFXN3-204ENST00000466982 AEBP1Q8IUX7 1158 aa13.58□□□□□ -0.24
SFXN3-204ENST00000466982 TMEM57Q8N5G2 664 aa13.58□□□□□ -0.24
SFXN3-204ENST00000466982 NSFL1CQ9UNZ2 370 aaKnown RBP13.58□□□□□ -0.24
SFXN3-204ENST00000466982 PLCH2O75038 1416 aa13.57□□□□□ -0.24
SFXN3-204ENST00000466982 ZNF710Q8N1W2 664 aa13.57□□□□□ -0.24
SFXN3-204ENST00000466982 TBC1D9Q6ZT07 1266 aa13.57□□□□□ -0.24
SFXN3-204ENST00000466982 SSH1Q8WYL5 1049 aa13.57□□□□□ -0.24
SFXN3-204ENST00000466982 SYCE3A1L190 88 aa13.56□□□□□ -0.24
SFXN3-204ENST00000466982 CHD1LQ86WJ1 897 aa13.56□□□□□ -0.24
SFXN3-204ENST00000466982 CD109Q6YHK3 1445 aa13.56□□□□□ -0.24
SFXN3-204ENST00000466982 POLR3AO14802 1390 aaPredicted RBP13.56□□□□□ -0.24
SFXN3-204ENST00000466982 EXOSC9Q06265 439 aaKnown RBP13.56□□□□□ -0.24
SFXN3-204ENST00000466982 NOB1Q9ULX3 412 aaKnown RBP13.56□□□□□ -0.24
SFXN3-204ENST00000466982 DDX19BQ9UMR2 479 aa13.56□□□□□ -0.24
SFXN3-204ENST00000466982 RNF17Q9BXT8 1623 aaKnown RBP13.56□□□□□ -0.24
SFXN3-204ENST00000466982 ATP2B3Q16720 1220 aa13.55□□□□□ -0.24
SFXN3-204ENST00000466982 YY1AP1Q9H869 796 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms