RNA–Protein interactions for RNA: ENST00000466950.5

SEC22A-203, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-203ENST00000466950 ORAI2Q96SN7 254 aa18.1■□□□□ 0.49
SEC22A-203ENST00000466950 NPHP3Q7Z494 1330 aa18.09■□□□□ 0.49
SEC22A-203ENST00000466950 TTC21AQ8NDW8 1320 aa18.09■□□□□ 0.49
SEC22A-203ENST00000466950 AMER1Q5JTC6 1135 aaPredicted RBP18.09■□□□□ 0.49
SEC22A-203ENST00000466950 CERKQ8TCT0 537 aa18.09■□□□□ 0.49
SEC22A-203ENST00000466950 BRINP3Q76B58 766 aa18.08■□□□□ 0.48
SEC22A-203ENST00000466950 CRYBG1Q9Y4K1 1723 aa18.08■□□□□ 0.48
SEC22A-203ENST00000466950 PHLPP1O60346 1717 aa18.07■□□□□ 0.48
SEC22A-203ENST00000466950 MED1Q15648 1581 aaPredicted RBP18.07■□□□□ 0.48
SEC22A-203ENST00000466950 SBNO1A3KN83 1393 aa18.06■□□□□ 0.48
SEC22A-203ENST00000466950 PARD3Q8TEW0 1356 aa18.06■□□□□ 0.48
SEC22A-203ENST00000466950 TTC21BQ7Z4L5 1316 aa18.06■□□□□ 0.48
SEC22A-203ENST00000466950 TOM1O60784 492 aa18.06■□□□□ 0.48
SEC22A-203ENST00000466950 OVOS2A0A0J9YW53 1432 aa18.06■□□□□ 0.48
SEC22A-203ENST00000466950 OVOS2Q6IE36 1432 aa18.06■□□□□ 0.48
SEC22A-203ENST00000466950 COL16A1Q07092 1604 aaPredicted RBP18.05■□□□□ 0.48
SEC22A-203ENST00000466950 ABCA3Q99758 1704 aa18.04■□□□□ 0.48
SEC22A-203ENST00000466950 MAP2P11137 1827 aaKnown RBP18.04■□□□□ 0.48
SEC22A-203ENST00000466950 USP31Q70CQ4 1352 aa18.04■□□□□ 0.48
SEC22A-203ENST00000466950 PHRF1Q9P1Y6 1649 aaKnown RBP18.03■□□□□ 0.48
SEC22A-203ENST00000466950 TNS3Q68CZ2 1445 aa18.03■□□□□ 0.48
SEC22A-203ENST00000466950 COL22A1Q8NFW1 1626 aaPredicted RBP18.02■□□□□ 0.48
SEC22A-203ENST00000466950 ANP32CO43423 234 aa18.02■□□□□ 0.48
SEC22A-203ENST00000466950 FOXO3O43524 673 aa18.02■□□□□ 0.48
SEC22A-203ENST00000466950 PSME1Q06323 249 aa18.02■□□□□ 0.48
SEC22A-203ENST00000466950 SOS2Q07890 1332 aaPredicted RBP18.01■□□□□ 0.47
SEC22A-203ENST00000466950 RALBP1Q15311 655 aa18.01■□□□□ 0.47
SEC22A-203ENST00000466950 PRKRIP1Q9H875 184 aaPredicted RBP18.01■□□□□ 0.47
SEC22A-203ENST00000466950 SLIT3O75094 1523 aa18.01■□□□□ 0.47
SEC22A-203ENST00000466950 FYB1O15117 783 aa18■□□□□ 0.47
SEC22A-203ENST00000466950 SCAF1Q9H7N4 1312 aaKnown RBP17.99■□□□□ 0.47
SEC22A-203ENST00000466950 LTN1O94822 1766 aa17.99■□□□□ 0.47
SEC22A-203ENST00000466950 KRT28Q7Z3Y7 464 aa17.99■□□□□ 0.47
SEC22A-203ENST00000466950 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.99■□□□□ 0.47
SEC22A-203ENST00000466950 ARHGEF10O15013 1369 aa17.99■□□□□ 0.47
SEC22A-203ENST00000466950 UBAP1LF5GYI3 381 aa17.98■□□□□ 0.47
SEC22A-203ENST00000466950 CC2D1BQ5T0F9 858 aaKnown RBP17.98■□□□□ 0.47
SEC22A-203ENST00000466950 SHPRHQ149N8 1683 aa17.98■□□□□ 0.47
SEC22A-203ENST00000466950 NME9Q86XW9 330 aa17.97■□□□□ 0.47
SEC22A-203ENST00000466950 NFAT5O94916 1531 aa17.96■□□□□ 0.47
SEC22A-203ENST00000466950 SMG6Q86US8 1419 aaKnown RBP17.96■□□□□ 0.47
SEC22A-203ENST00000466950 SPATA31A3Q5VYP0 1347 aa17.96■□□□□ 0.46
SEC22A-203ENST00000466950 AATKQ6ZMQ8 1374 aa17.95■□□□□ 0.46
SEC22A-203ENST00000466950 GGNBP2Q9H3C7 697 aa17.95■□□□□ 0.46
SEC22A-203ENST00000466950 USP19O94966 1318 aa17.95■□□□□ 0.46
SEC22A-203ENST00000466950 MYBBP1AQ9BQG0 1328 aaKnown RBP17.95■□□□□ 0.46
SEC22A-203ENST00000466950 COG3Q96JB2 828 aa17.94■□□□□ 0.46
SEC22A-203ENST00000466950 PAK3O75914 559 aaPredicted RBP17.93■□□□□ 0.46
SEC22A-203ENST00000466950 XPCQ01831 940 aaPredicted RBP17.93■□□□□ 0.46
SEC22A-203ENST00000466950 MORC1Q86VD1 984 aa17.93■□□□□ 0.46
SEC22A-203ENST00000466950 ABTB2Q8N961 1025 aa17.93■□□□□ 0.46
SEC22A-203ENST00000466950 DDX17Q92841 729 aaKnown RBP17.93■□□□□ 0.46
SEC22A-203ENST00000466950 ABCC6O95255 1503 aa17.93■□□□□ 0.46
SEC22A-203ENST00000466950 NLRP13Q86W25 1043 aa17.91■□□□□ 0.46
SEC22A-203ENST00000466950 CDK12Q9NYV4 1490 aaPredicted RBP17.9■□□□□ 0.46
SEC22A-203ENST00000466950 PEAK1Q9H792 1746 aa17.9■□□□□ 0.46
SEC22A-203ENST00000466950 CCER2I3L3R5 266 aa17.89■□□□□ 0.45
SEC22A-203ENST00000466950 NLRP6P59044 892 aa17.89■□□□□ 0.45
SEC22A-203ENST00000466950 PIP4K2BP78356 416 aa17.89■□□□□ 0.45
SEC22A-203ENST00000466950 ZRANB1Q9UGI0 708 aa17.89■□□□□ 0.45
SEC22A-203ENST00000466950 KIF24Q5T7B8 1368 aa17.89■□□□□ 0.45
SEC22A-203ENST00000466950 PPP2R1AP30153 589 aa17.88■□□□□ 0.45
SEC22A-203ENST00000466950 MIER1Q8N108 512 aa17.88■□□□□ 0.45
SEC22A-203ENST00000466950 LRRC59Q96AG4 307 aaKnown RBP17.88■□□□□ 0.45
SEC22A-203ENST00000466950 COL18A1P39060 1754 aa17.87■□□□□ 0.45
SEC22A-203ENST00000466950 KCNH5Q8NCM2 988 aa17.87■□□□□ 0.45
SEC22A-203ENST00000466950 PNPLA6Q8IY17 1366 aa17.87■□□□□ 0.45
SEC22A-203ENST00000466950 RTL1A6NKG5 1358 aa17.86■□□□□ 0.45
SEC22A-203ENST00000466950 COL3A1P02461 1466 aaPredicted RBP17.86■□□□□ 0.45
SEC22A-203ENST00000466950 INSRP06213 1382 aa17.85■□□□□ 0.45
SEC22A-203ENST00000466950 RGPD5Q99666 1765 aa17.85■□□□□ 0.45
SEC22A-203ENST00000466950 FAM208AQ9UK61 1670 aaKnown RBP17.85■□□□□ 0.45
SEC22A-203ENST00000466950 CNGB1Q14028 1251 aaPredicted RBP17.84■□□□□ 0.45
SEC22A-203ENST00000466950 LMO7Q8WWI1 1683 aa17.83■□□□□ 0.45
SEC22A-203ENST00000466950 CPDO75976 1380 aa17.83■□□□□ 0.45
SEC22A-203ENST00000466950 NUTM2GQ5VZR2 741 aa17.83■□□□□ 0.44
SEC22A-203ENST00000466950 LMOD2Q6P5Q4 547 aa17.83■□□□□ 0.44
SEC22A-203ENST00000466950 COL14A1Q05707 1796 aaKnown RBP17.82■□□□□ 0.44
SEC22A-203ENST00000466950 RGPD1P0DJD0 1748 aa17.82■□□□□ 0.44
SEC22A-203ENST00000466950 FLT4P35916 1363 aa17.81■□□□□ 0.44
SEC22A-203ENST00000466950 JCADQ9P266 1359 aa17.81■□□□□ 0.44
SEC22A-203ENST00000466950 GCP02774 474 aa17.81■□□□□ 0.44
SEC22A-203ENST00000466950 TNNT2P45379 298 aaPredicted RBP17.81■□□□□ 0.44
SEC22A-203ENST00000466950 POLKQ9UBT6 870 aa17.81■□□□□ 0.44
SEC22A-203ENST00000466950 CAMTA1Q9Y6Y1 1673 aa17.8■□□□□ 0.44
SEC22A-203ENST00000466950 MAP3K19Q56UN5 1328 aa17.79■□□□□ 0.44
SEC22A-203ENST00000466950 NWD2Q9ULI1 1742 aa17.79■□□□□ 0.44
SEC22A-203ENST00000466950 MTHFSP49914 203 aa17.79■□□□□ 0.44
SEC22A-203ENST00000466950 PLCH1Q4KWH8 1693 aa17.79■□□□□ 0.44
SEC22A-203ENST00000466950 BLMP54132 1417 aaPredicted RBP17.79■□□□□ 0.44
SEC22A-203ENST00000466950 CFAP53Q96M91 514 aa17.78■□□□□ 0.44
SEC22A-203ENST00000466950 RRS1Q15050 365 aaKnown RBP17.77■□□□□ 0.44
SEC22A-203ENST00000466950 ARHGEF25Q86VW2 580 aa17.77■□□□□ 0.44
SEC22A-203ENST00000466950 MRS2Q9HD23 443 aa17.77■□□□□ 0.44
SEC22A-203ENST00000466950 EMILIN1Q9Y6C2 1016 aa17.77■□□□□ 0.44
SEC22A-203ENST00000466950 RGPD2P0DJD1 1756 aa17.76■□□□□ 0.43
SEC22A-203ENST00000466950 NRAPQ86VF7 1730 aa17.75■□□□□ 0.43
SEC22A-203ENST00000466950 SPATA31A6Q5VVP1 1343 aa17.74■□□□□ 0.43
SEC22A-203ENST00000466950 FBLN1P23142 703 aa17.74■□□□□ 0.43
SEC22A-203ENST00000466950 HSPA1LP34931 641 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms