RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 HPS1Q92902 700 aa7.83□□□□□ -1.16
GTF3C3-209ENST00000466862 CSPP1Q1MSJ5 1256 aa7.82□□□□□ -1.16
GTF3C3-209ENST00000466862 GPBP1L1Q9HC44 474 aaPredicted RBP7.82□□□□□ -1.16
GTF3C3-209ENST00000466862 GMPR2Q9P2T1 348 aaKnown RBP7.82□□□□□ -1.16
GTF3C3-209ENST00000466862 FBXO31Q5XUX0 539 aaPredicted RBP7.81□□□□□ -1.16
GTF3C3-209ENST00000466862 EHBP1Q8NDI1 1231 aa7.81□□□□□ -1.16
GTF3C3-209ENST00000466862 BAP1Q92560 729 aa7.81□□□□□ -1.16
GTF3C3-209ENST00000466862 TLL2Q9Y6L7 1015 aa7.81□□□□□ -1.16
GTF3C3-209ENST00000466862 KDM4CQ9H3R0 1056 aa7.8□□□□□ -1.16
GTF3C3-209ENST00000466862 PLEKHG3A1L390 1219 aa7.79□□□□□ -1.16
GTF3C3-209ENST00000466862 ALDH1A1P00352 501 aa7.79□□□□□ -1.16
GTF3C3-209ENST00000466862 RTL5Q5HYW3 569 aaPredicted RBP7.79□□□□□ -1.16
GTF3C3-209ENST00000466862 ATP13A2Q9NQ11 1180 aa7.79□□□□□ -1.16
GTF3C3-209ENST00000466862 MPNDQ8N594 471 aa7.78□□□□□ -1.16
GTF3C3-209ENST00000466862 C4orf48Q5BLP8 95 aa7.77□□□□□ -1.17
GTF3C3-209ENST00000466862 SH3D19Q5HYK7 790 aa7.77□□□□□ -1.17
GTF3C3-209ENST00000466862 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.77□□□□□ -1.17
GTF3C3-209ENST00000466862 FAM117AQ9C073 453 aa7.77□□□□□ -1.17
GTF3C3-209ENST00000466862 C11orf95C9JLR9 678 aaPredicted RBP7.76□□□□□ -1.17
GTF3C3-209ENST00000466862 VARSP26640 1264 aaKnown RBP7.76□□□□□ -1.17
GTF3C3-209ENST00000466862 CTHP32929 405 aa7.76□□□□□ -1.17
GTF3C3-209ENST00000466862 LCE2CQ5TA81 110 aa7.76□□□□□ -1.17
GTF3C3-209ENST00000466862 FOXJ1Q92949 421 aa7.76□□□□□ -1.17
GTF3C3-209ENST00000466862 RSPH6AQ9H0K4 717 aa7.76□□□□□ -1.17
GTF3C3-209ENST00000466862 C1QTNF2Q9BXJ5 285 aa7.75□□□□□ -1.17
GTF3C3-209ENST00000466862 POLR3EQ9NVU0 708 aa7.75□□□□□ -1.17
GTF3C3-209ENST00000466862 NUTM2BA6NNL0 878 aaPredicted RBP7.74□□□□□ -1.17
GTF3C3-209ENST00000466862 NUTM2EB1AL46 878 aaPredicted RBP7.74□□□□□ -1.17
GTF3C3-209ENST00000466862 WFS1O76024 890 aa7.74□□□□□ -1.17
GTF3C3-209ENST00000466862 NUTM2DQ5VT03 806 aaPredicted RBP7.74□□□□□ -1.17
GTF3C3-209ENST00000466862 SH3RF1Q7Z6J0 888 aa7.74□□□□□ -1.17
GTF3C3-209ENST00000466862 NUTM2AQ8IVF1 878 aaPredicted RBP7.74□□□□□ -1.17
GTF3C3-209ENST00000466862 HELBQ8NG08 1087 aaPredicted RBP7.74□□□□□ -1.17
GTF3C3-209ENST00000466862 TRIM47Q96LD4 638 aa7.74□□□□□ -1.17
GTF3C3-209ENST00000466862 NFX1Q12986 1120 aaKnown RBP7.73□□□□□ -1.17
GTF3C3-209ENST00000466862 SKIV2LQ15477 1246 aaKnown RBP7.73□□□□□ -1.17
GTF3C3-209ENST00000466862 PPP2R2DQ66LE6 453 aa7.73□□□□□ -1.17
GTF3C3-209ENST00000466862 TRIM46Q7Z4K8 759 aa7.73□□□□□ -1.17
GTF3C3-209ENST00000466862 DDRGK1Q96HY6 314 aa7.73□□□□□ -1.17
GTF3C3-209ENST00000466862 CDK15Q96Q40 435 aa7.73□□□□□ -1.17
GTF3C3-209ENST00000466862 SNRPBP14678 240 aaKnown RBP7.72□□□□□ -1.17
GTF3C3-209ENST00000466862 SH3BP5LQ7L8J4 393 aa7.72□□□□□ -1.17
GTF3C3-209ENST00000466862 TSC1Q92574 1164 aa7.72□□□□□ -1.17
GTF3C3-209ENST00000466862 KLF16Q9BXK1 252 aaPredicted RBP7.72□□□□□ -1.17
GTF3C3-209ENST00000466862 WASF2Q9Y6W5 498 aa7.72□□□□□ -1.17
GTF3C3-209ENST00000466862 ADH1CP00326 375 aa7.71□□□□□ -1.18
GTF3C3-209ENST00000466862 BMP1P13497 986 aa7.71□□□□□ -1.18
GTF3C3-209ENST00000466862 NNTQ13423 1086 aa7.71□□□□□ -1.18
GTF3C3-209ENST00000466862 PROCA1Q8NCQ7 364 aaPredicted RBP7.71□□□□□ -1.18
GTF3C3-209ENST00000466862 TIMP2P16035 220 aa7.7□□□□□ -1.18
GTF3C3-209ENST00000466862 CTDSPL2Q05D32 466 aa7.7□□□□□ -1.18
GTF3C3-209ENST00000466862 FAM174AQ8TBP5 190 aa7.7□□□□□ -1.18
GTF3C3-209ENST00000466862 NBPF14Q5TI25 921 aa7.69□□□□□ -1.18
GTF3C3-209ENST00000466862 SENP2Q9HC62 589 aa7.69□□□□□ -1.18
GTF3C3-209ENST00000466862 CAPN5O15484 640 aaPredicted RBP7.68□□□□□ -1.18
GTF3C3-209ENST00000466862 NR3C2P08235 984 aa7.68□□□□□ -1.18
GTF3C3-209ENST00000466862 BPHLQ86WA6 291 aaPredicted RBP7.68□□□□□ -1.18
GTF3C3-209ENST00000466862 TRMT44Q8IYL2 757 aaKnown RBP7.68□□□□□ -1.18
GTF3C3-209ENST00000466862 LRRN4Q8WUT4 740 aa7.68□□□□□ -1.18
GTF3C3-209ENST00000466862 GRM5P41594 1212 aa7.67□□□□□ -1.18
GTF3C3-209ENST00000466862 ARMC2Q8NEN0 867 aa7.67□□□□□ -1.18
GTF3C3-209ENST00000466862 KIFC2Q96AC6 838 aa7.67□□□□□ -1.18
GTF3C3-209ENST00000466862 MAP4K5Q9Y4K4 846 aa7.67□□□□□ -1.18
GTF3C3-209ENST00000466862 GPKOWQ92917 476 aaPredicted RBP eCLIP7.66□□□□□ -1.18
GTF3C3-209ENST00000466862 OCSTAMPQ9BR26 566 aa7.65□□□□□ -1.18
GTF3C3-209ENST00000466862 HMX1Q9NP08 348 aaPredicted RBP7.65□□□□□ -1.18
GTF3C3-209ENST00000466862 WDR4P57081 412 aaKnown RBP7.64□□□□□ -1.19
GTF3C3-209ENST00000466862 NR5A1Q13285 461 aa7.64□□□□□ -1.19
GTF3C3-209ENST00000466862 ERFEQ4G0M1 354 aa7.64□□□□□ -1.19
GTF3C3-209ENST00000466862 GOPCQ9HD26 462 aa7.64□□□□□ -1.19
GTF3C3-209ENST00000466862 ZC3H4Q9UPT8 1303 aaKnown RBP7.63□□□□□ -1.19
GTF3C3-209ENST00000466862 WIPF1O43516 503 aa7.63□□□□□ -1.19
GTF3C3-209ENST00000466862 USP17L8P0C7I0 530 aa7.63□□□□□ -1.19
GTF3C3-209ENST00000466862 FSHRP23945 695 aa7.63□□□□□ -1.19
GTF3C3-209ENST00000466862 NR6A1Q15406 480 aa7.63□□□□□ -1.19
GTF3C3-209ENST00000466862 ITPKCQ96DU7 683 aa7.63□□□□□ -1.19
GTF3C3-209ENST00000466862 ZFAND3Q9H8U3 227 aa7.63□□□□□ -1.19
GTF3C3-209ENST00000466862 FKBPLQ9UIM3 349 aa7.63□□□□□ -1.19
GTF3C3-209ENST00000466862 TERTO14746 1132 aaKnown RBP7.62□□□□□ -1.19
GTF3C3-209ENST00000466862 RFC5P40937 340 aa7.62□□□□□ -1.19
GTF3C3-209ENST00000466862 BRPF1P55201 1214 aaPredicted RBP7.62□□□□□ -1.19
GTF3C3-209ENST00000466862 AGERQ15109 404 aa7.62□□□□□ -1.19
GTF3C3-209ENST00000466862 MRPL14Q6P1L8 145 aaKnown RBP7.62□□□□□ -1.19
GTF3C3-209ENST00000466862 EPS8L1Q8TE68 723 aa7.62□□□□□ -1.19
GTF3C3-209ENST00000466862 MAGEB6P1A0A0J9YX57 407 aa7.61□□□□□ -1.19
GTF3C3-209ENST00000466862 ZIC2O95409 532 aaPredicted RBP7.61□□□□□ -1.19
GTF3C3-209ENST00000466862 PDXDC2PQ6P474 469 aa7.61□□□□□ -1.19
GTF3C3-209ENST00000466862 ZFP42Q96MM3 310 aa7.61□□□□□ -1.19
GTF3C3-209ENST00000466862 STK17AQ9UEE5 414 aa7.61□□□□□ -1.19
GTF3C3-209ENST00000466862 AP1G2O75843 785 aa7.6□□□□□ -1.19
GTF3C3-209ENST00000466862 ARID5BQ14865 1188 aa7.6□□□□□ -1.19
GTF3C3-209ENST00000466862 MEIOBQ8N635 442 aa7.6□□□□□ -1.19
GTF3C3-209ENST00000466862 CARD14Q9BXL6 1004 aa7.6□□□□□ -1.19
GTF3C3-209ENST00000466862 NEUROD2Q15784 382 aa7.59□□□□□ -1.19
GTF3C3-209ENST00000466862 TRIM34Q9BYJ4 488 aa7.59□□□□□ -1.19
GTF3C3-209ENST00000466862 INSM1Q01101 510 aaPredicted RBP7.58□□□□□ -1.2
GTF3C3-209ENST00000466862 VASH1Q7L8A9 365 aaPredicted RBP7.58□□□□□ -1.2
GTF3C3-209ENST00000466862 PURBQ96QR8 312 aaKnown RBP7.58□□□□□ -1.2
GTF3C3-209ENST00000466862 ARHGAP9Q9BRR9 750 aa7.58□□□□□ -1.2
GTF3C3-209ENST00000466862 GPSM3Q9Y4H4 160 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms