RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 A0A0G2JS52 829 aa27.57■■■□□ 2
SRSF4-202ENST00000466448 MYT1Q01538 1121 aa27.57■■■□□ 2
SRSF4-202ENST00000466448 FAM98CQ17RN3 349 aaKnown RBP27.57■■■□□ 2
SRSF4-202ENST00000466448 COL14A1Q05707 1796 aaKnown RBP27.55■■■□□ 2
SRSF4-202ENST00000466448 PAK3O75914 559 aaPredicted RBP27.55■■■□□ 2
SRSF4-202ENST00000466448 HRCP23327 699 aa27.55■■■□□ 2
SRSF4-202ENST00000466448 ATP7BP35670 1465 aa27.55■■■□□ 2
SRSF4-202ENST00000466448 ARHGEF28Q8N1W1 1705 aaKnown RBP27.53■■■□□ 2
SRSF4-202ENST00000466448 CRYBG1Q9Y4K1 1723 aa27.53■■■□□ 2
SRSF4-202ENST00000466448 NUDT16Q96DE0 195 aaKnown RBP27.52■■■□□ 2
SRSF4-202ENST00000466448 SPATA31A5Q5VU36 1347 aa27.5■■□□□ 1.99
SRSF4-202ENST00000466448 SPATA31A7Q8IWB4 1347 aa27.5■■□□□ 1.99
SRSF4-202ENST00000466448 PRDM11Q9NQV5 511 aa27.49■■□□□ 1.99
SRSF4-202ENST00000466448 ITSN1Q15811 1721 aa27.47■■□□□ 1.99
SRSF4-202ENST00000466448 CDK19Q9BWU1 502 aa27.46■■□□□ 1.99
SRSF4-202ENST00000466448 KIAA0232Q92628 1395 aa27.46■■□□□ 1.99
SRSF4-202ENST00000466448 BAG6P46379 1132 aa27.45■■□□□ 1.98
SRSF4-202ENST00000466448 FAM182BQ5T319 152 aa27.44■■□□□ 1.98
SRSF4-202ENST00000466448 THSD7AQ9UPZ6 1657 aa27.43■■□□□ 1.98
SRSF4-202ENST00000466448 POLR3AO14802 1390 aaPredicted RBP27.43■■□□□ 1.98
SRSF4-202ENST00000466448 CHRNA2Q15822 529 aa27.42■■□□□ 1.98
SRSF4-202ENST00000466448 NUTM2GQ5VZR2 741 aa27.41■■□□□ 1.98
SRSF4-202ENST00000466448 PHRF1Q9P1Y6 1649 aaKnown RBP27.41■■□□□ 1.98
SRSF4-202ENST00000466448 ACEP12821 1306 aa27.41■■□□□ 1.98
SRSF4-202ENST00000466448 TOPAZ1Q8N9V7 1692 aa27.4■■□□□ 1.98
SRSF4-202ENST00000466448 CCDC61Q9Y6R9 512 aa27.4■■□□□ 1.98
SRSF4-202ENST00000466448 SPATA31A1Q5TZJ5 1347 aa27.4■■□□□ 1.98
SRSF4-202ENST00000466448 ZC3H6P61129 1189 aaKnown RBP27.39■■□□□ 1.98
SRSF4-202ENST00000466448 NBPF8Q3BBV2 869 aa27.39■■□□□ 1.98
SRSF4-202ENST00000466448 PLEKHG3A1L390 1219 aa27.37■■□□□ 1.97
SRSF4-202ENST00000466448 PSDA5PKW4 1024 aaPredicted RBP27.37■■□□□ 1.97
SRSF4-202ENST00000466448 EN1Q05925 392 aaPredicted RBP27.37■■□□□ 1.97
SRSF4-202ENST00000466448 NBPF1Q3BBV0 1214 aa27.37■■□□□ 1.97
SRSF4-202ENST00000466448 STRN4Q9NRL3 753 aa27.37■■□□□ 1.97
SRSF4-202ENST00000466448 KIAA1210Q9ULL0 1709 aa27.36■■□□□ 1.97
SRSF4-202ENST00000466448 RGPD1P0DJD0 1748 aa27.35■■□□□ 1.97
SRSF4-202ENST00000466448 LRP5O75197 1615 aa27.34■■□□□ 1.97
SRSF4-202ENST00000466448 DISP2A7MBM2 1401 aa27.33■■□□□ 1.97
SRSF4-202ENST00000466448 NRKQ7Z2Y5 1582 aa27.32■■□□□ 1.96
SRSF4-202ENST00000466448 ABTB2Q8N961 1025 aa27.32■■□□□ 1.96
SRSF4-202ENST00000466448 USP35Q9P2H5 1018 aa27.31■■□□□ 1.96
SRSF4-202ENST00000466448 SSH2Q76I76 1423 aa27.31■■□□□ 1.96
SRSF4-202ENST00000466448 TNS1Q9HBL0 1735 aaKnown RBP27.3■■□□□ 1.96
SRSF4-202ENST00000466448 SRPK2P78362 688 aaKnown RBP27.29■■□□□ 1.96
SRSF4-202ENST00000466448 USP19O94966 1318 aa27.29■■□□□ 1.96
SRSF4-202ENST00000466448 PPIP5K1Q6PFW1 1433 aa27.29■■□□□ 1.96
SRSF4-202ENST00000466448 CAMTA1Q9Y6Y1 1673 aa27.28■■□□□ 1.96
SRSF4-202ENST00000466448 CPDO75976 1380 aa27.28■■□□□ 1.96
SRSF4-202ENST00000466448 CENPJQ9HC77 1338 aaPredicted RBP27.28■■□□□ 1.96
SRSF4-202ENST00000466448 EVA1CP58658 441 aa27.28■■□□□ 1.96
SRSF4-202ENST00000466448 FAM196AQ6ZSG2 479 aa27.27■■□□□ 1.96
SRSF4-202ENST00000466448 BARGINQ6ZT62 677 aa27.27■■□□□ 1.96
SRSF4-202ENST00000466448 TRIM37O94972 964 aa27.26■■□□□ 1.95
SRSF4-202ENST00000466448 EZH2Q15910 746 aaKnown RBP27.26■■□□□ 1.95
SRSF4-202ENST00000466448 LARP1Q6PKG0 1096 aaKnown RBP27.26■■□□□ 1.95
SRSF4-202ENST00000466448 CABP2Q9NPB3 220 aa27.26■■□□□ 1.95
SRSF4-202ENST00000466448 LMO7Q8WWI1 1683 aa27.25■■□□□ 1.95
SRSF4-202ENST00000466448 R3HDM1Q15032 1099 aaKnown RBP27.25■■□□□ 1.95
SRSF4-202ENST00000466448 GCP02774 474 aa27.23■■□□□ 1.95
SRSF4-202ENST00000466448 NLRP13Q86W25 1043 aa27.23■■□□□ 1.95
SRSF4-202ENST00000466448 CAMKK2Q96RR4 588 aa27.23■■□□□ 1.95
SRSF4-202ENST00000466448 PDE3BQ13370 1112 aa27.21■■□□□ 1.95
SRSF4-202ENST00000466448 TCP11L2Q8N4U5 519 aa27.21■■□□□ 1.95
SRSF4-202ENST00000466448 APBA3O96018 575 aa27.19■■□□□ 1.94
SRSF4-202ENST00000466448 BRD4O60885 1362 aaPredicted RBP27.19■■□□□ 1.94
SRSF4-202ENST00000466448 COL5A2P05997 1499 aaPredicted RBP27.19■■□□□ 1.94
SRSF4-202ENST00000466448 CABP1Q9NZU7 370 aa27.18■■□□□ 1.94
SRSF4-202ENST00000466448 QRICH2Q9H0J4 1663 aa27.17■■□□□ 1.94
SRSF4-202ENST00000466448 USP6P35125 1406 aa27.17■■□□□ 1.94
SRSF4-202ENST00000466448 PARD3Q8TEW0 1356 aa27.17■■□□□ 1.94
SRSF4-202ENST00000466448 THRAP3Q9Y2W1 955 aaKnown RBP27.16■■□□□ 1.94
SRSF4-202ENST00000466448 L3MBTL2Q969R5 705 aa27.15■■□□□ 1.94
SRSF4-202ENST00000466448 NLRP6P59044 892 aa27.13■■□□□ 1.93
SRSF4-202ENST00000466448 SLIT3O75094 1523 aa27.12■■□□□ 1.93
SRSF4-202ENST00000466448 ZBTB7CA1YPR0 619 aa27.12■■□□□ 1.93
SRSF4-202ENST00000466448 CRB1P82279 1406 aa27.12■■□□□ 1.93
SRSF4-202ENST00000466448 AATKQ6ZMQ8 1374 aa27.1■■□□□ 1.93
SRSF4-202ENST00000466448 EVC2Q86UK5 1308 aa27.09■■□□□ 1.93
SRSF4-202ENST00000466448 RREB1Q92766 1687 aa27.08■■□□□ 1.93
SRSF4-202ENST00000466448 PARP4Q9UKK3 1724 aaKnown RBP27.08■■□□□ 1.93
SRSF4-202ENST00000466448 PIK3C2AO00443 1686 aa27.07■■□□□ 1.92
SRSF4-202ENST00000466448 TRPM1Q7Z4N2 1603 aa27.06■■□□□ 1.92
SRSF4-202ENST00000466448 SIN3AQ96ST3 1273 aa27.06■■□□□ 1.92
SRSF4-202ENST00000466448 NUP188Q5SRE5 1749 aa27.04■■□□□ 1.92
SRSF4-202ENST00000466448 OVOS2A0A0G2JMS6 1433 aa27.03■■□□□ 1.92
SRSF4-202ENST00000466448 OVOS2A0A0J9YW53 1432 aa27.03■■□□□ 1.92
SRSF4-202ENST00000466448 ROCK2O75116 1388 aaKnown RBP27.03■■□□□ 1.92
SRSF4-202ENST00000466448 OVOS2Q6IE36 1432 aa27.03■■□□□ 1.92
SRSF4-202ENST00000466448 TOM1L2Q6ZVM7 507 aa27.03■■□□□ 1.92
SRSF4-202ENST00000466448 AXIN2Q9Y2T1 843 aa27.03■■□□□ 1.92
SRSF4-202ENST00000466448 C11orf95C9JLR9 678 aaPredicted RBP27.02■■□□□ 1.92
SRSF4-202ENST00000466448 NBPF14Q5TI25 921 aa27.02■■□□□ 1.92
SRSF4-202ENST00000466448 PEAK1Q9H792 1746 aa27.02■■□□□ 1.92
SRSF4-202ENST00000466448 LRRC37A3O60309 1634 aa27.01■■□□□ 1.92
SRSF4-202ENST00000466448 CPSF1Q10570 1443 aaKnown RBP27.01■■□□□ 1.91
SRSF4-202ENST00000466448 TTC21BQ7Z4L5 1316 aa27.01■■□□□ 1.91
SRSF4-202ENST00000466448 COL18A1P39060 1754 aa27■■□□□ 1.91
SRSF4-202ENST00000466448 WDR17Q8IZU2 1322 aa27■■□□□ 1.91
SRSF4-202ENST00000466448 DDB1Q16531 1140 aa27■■□□□ 1.91
SRSF4-202ENST00000466448 NEUROD1Q13562 356 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms