RNA–Protein interactions for RNA: ENST00000466308.1

CLSPN-204, Transcript of claspin, humanhuman

TSL 3

Gene CLSPN, Length 717 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-204ENST00000466308 NBPF3Q9H094 633 aa10.65□□□□□ -0.7
CLSPN-204ENST00000466308 F12P00748 615 aaPredicted RBP10.64□□□□□ -0.71
CLSPN-204ENST00000466308 ARID4AP29374 1257 aaPredicted RBP10.64□□□□□ -0.71
CLSPN-204ENST00000466308 PUS10Q3MIT2 529 aaKnown RBP10.64□□□□□ -0.71
CLSPN-204ENST00000466308 USB1Q9BQ65 265 aaKnown RBP10.64□□□□□ -0.71
CLSPN-204ENST00000466308 PRR14Q9BWN1 585 aa10.64□□□□□ -0.71
CLSPN-204ENST00000466308 VPS9D1Q9Y2B5 631 aa10.64□□□□□ -0.71
CLSPN-204ENST00000466308 SALL2Q9Y467 1007 aaPredicted RBP10.64□□□□□ -0.71
CLSPN-204ENST00000466308 DMRTA1Q5VZB9 504 aa10.63□□□□□ -0.71
CLSPN-204ENST00000466308 USP17L15C9J2P7 530 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 USP17L10C9JJH3 530 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 USP17L13C9JLJ4 530 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 USP17L12C9JPN9 530 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 USP17L11C9JVI0 530 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 USP17L21D6R901 530 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 USP17L18D6R9N7 530 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 USP17L22D6RA61 530 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 USP17L17D6RBQ6 530 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 USP17L19D6RCP7 530 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 USP17L20D6RJB6 530 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 IGSF3O75054 1194 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 ERCC3P19447 782 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 SSFA2P28290 1259 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 USP17L24Q0WX57 530 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 LARP1Q6PKG0 1096 aaKnown RBP10.62□□□□□ -0.71
CLSPN-204ENST00000466308 FAM174AQ8TBP5 190 aa10.62□□□□□ -0.71
CLSPN-204ENST00000466308 MKRN1Q9UHC7 482 aaKnown RBP10.62□□□□□ -0.71
CLSPN-204ENST00000466308 RBM47A0AV96 593 aaKnown RBP10.61□□□□□ -0.71
CLSPN-204ENST00000466308 LZTS3O60299 673 aaPredicted RBP10.61□□□□□ -0.71
CLSPN-204ENST00000466308 PBX2P40425 430 aa10.61□□□□□ -0.71
CLSPN-204ENST00000466308 MCCD1P59942 119 aaPredicted RBP10.61□□□□□ -0.71
CLSPN-204ENST00000466308 POTEEQ6S8J3 1075 aa10.61□□□□□ -0.71
CLSPN-204ENST00000466308 RNF19BQ6ZMZ0 732 aa10.61□□□□□ -0.71
CLSPN-204ENST00000466308 DEPDC4Q8N2C3 294 aa10.61□□□□□ -0.71
CLSPN-204ENST00000466308 ZFRQ96KR1 1074 aaKnown RBP10.61□□□□□ -0.71
CLSPN-204ENST00000466308 ATP5J2-PTCD1G3V325 749 aa10.6□□□□□ -0.71
CLSPN-204ENST00000466308 PTPRNQ16849 979 aa10.6□□□□□ -0.71
CLSPN-204ENST00000466308 CRTC2Q53ET0 693 aaPredicted RBP10.6□□□□□ -0.71
CLSPN-204ENST00000466308 BRICD5Q6PL45 260 aa10.6□□□□□ -0.71
CLSPN-204ENST00000466308 BLOC1S3Q6QNY0 202 aa10.6□□□□□ -0.71
CLSPN-204ENST00000466308 CLP1Q92989 425 aaKnown RBP10.6□□□□□ -0.71
CLSPN-204ENST00000466308 GPSM3Q9Y4H4 160 aa10.6□□□□□ -0.71
CLSPN-204ENST00000466308 PTK7Q13308 1070 aa10.59□□□□□ -0.71
CLSPN-204ENST00000466308 SLFNL1Q499Z3 407 aa10.59□□□□□ -0.71
CLSPN-204ENST00000466308 FAM200AQ8TCP9 573 aa10.59□□□□□ -0.71
CLSPN-204ENST00000466308 CDCA7Q9BWT1 371 aaPredicted RBP10.59□□□□□ -0.71
CLSPN-204ENST00000466308 MAP10Q9P2G4 905 aa10.59□□□□□ -0.71
CLSPN-204ENST00000466308 CEP126Q9P2H0 1117 aa10.59□□□□□ -0.71
CLSPN-204ENST00000466308 RASA1P20936 1047 aa10.58□□□□□ -0.72
CLSPN-204ENST00000466308 BHMG1C9JSJ3 638 aaPredicted RBP10.57□□□□□ -0.72
CLSPN-204ENST00000466308 JUNDP17535 347 aa10.57□□□□□ -0.72
CLSPN-204ENST00000466308 PTK2Q05397 1052 aa10.57□□□□□ -0.72
CLSPN-204ENST00000466308 FAM69CQ0P6D2 419 aa10.57□□□□□ -0.72
CLSPN-204ENST00000466308 NCOA4Q13772 614 aa10.57□□□□□ -0.72
CLSPN-204ENST00000466308 GPKOWQ92917 476 aaPredicted RBP eCLIP10.57□□□□□ -0.72
CLSPN-204ENST00000466308 LRCH3Q96II8 777 aa10.57□□□□□ -0.72
CLSPN-204ENST00000466308 AXIN2Q9Y2T1 843 aa10.57□□□□□ -0.72
CLSPN-204ENST00000466308 UNCXA6NJT0 531 aa10.56□□□□□ -0.72
CLSPN-204ENST00000466308 VARS2Q5ST30 1063 aaKnown RBP10.56□□□□□ -0.72
CLSPN-204ENST00000466308 RNF135Q8IUD6 432 aa10.56□□□□□ -0.72
CLSPN-204ENST00000466308 ANKMY2Q8IV38 441 aa10.56□□□□□ -0.72
CLSPN-204ENST00000466308 ARMC2Q8NEN0 867 aa10.56□□□□□ -0.72
CLSPN-204ENST00000466308 SLAIN2Q9P270 581 aa10.56□□□□□ -0.72
CLSPN-204ENST00000466308 ERBB3P21860 1342 aa10.56□□□□□ -0.72
CLSPN-204ENST00000466308 LOC105371045A0A1W2PR82 267 aa10.55□□□□□ -0.72
CLSPN-204ENST00000466308 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
CLSPN-204ENST00000466308 CTHP32929 405 aa10.55□□□□□ -0.72
CLSPN-204ENST00000466308 PDXDC2PQ6P474 469 aa10.55□□□□□ -0.72
CLSPN-204ENST00000466308 DNAJC14Q6Y2X3 702 aaPredicted RBP10.55□□□□□ -0.72
CLSPN-204ENST00000466308 PHTF2Q8N3S3 785 aa10.55□□□□□ -0.72
CLSPN-204ENST00000466308 PLPP7Q8NBV4 271 aa10.55□□□□□ -0.72
CLSPN-204ENST00000466308 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.55□□□□□ -0.72
CLSPN-204ENST00000466308 SOWAHDA6NJG2 315 aa10.54□□□□□ -0.72
CLSPN-204ENST00000466308 ATP2B4P23634 1241 aa10.54□□□□□ -0.72
CLSPN-204ENST00000466308 SWI5Q1ZZU3 235 aa10.54□□□□□ -0.72
CLSPN-204ENST00000466308 MAP7D1Q3KQU3 841 aa10.54□□□□□ -0.72
CLSPN-204ENST00000466308 CHIC2Q9UKJ5 165 aa10.54□□□□□ -0.72
CLSPN-204ENST00000466308 SCUBE3Q8IX30 993 aa10.53□□□□□ -0.72
CLSPN-204ENST00000466308 MRPL50Q8N5N7 158 aaKnown RBP10.53□□□□□ -0.72
CLSPN-204ENST00000466308 THAP11Q96EK4 314 aa10.53□□□□□ -0.72
CLSPN-204ENST00000466308 PCDHB9Q9Y5E1 797 aa10.53□□□□□ -0.72
CLSPN-204ENST00000466308 NR1I2O75469 434 aa10.52□□□□□ -0.73
CLSPN-204ENST00000466308 EML3Q32P44 896 aa10.52□□□□□ -0.73
CLSPN-204ENST00000466308 NBPF14Q5TI25 921 aa10.52□□□□□ -0.73
CLSPN-204ENST00000466308 TRIM50Q86XT4 487 aa10.52□□□□□ -0.73
CLSPN-204ENST00000466308 TK2O00142 265 aa10.51□□□□□ -0.73
CLSPN-204ENST00000466308 CCNYL3P0C7X3 344 aa10.51□□□□□ -0.73
CLSPN-204ENST00000466308 SHROOM4Q9ULL8 1493 aa10.5□□□□□ -0.73
CLSPN-204ENST00000466308 ATP1A2P50993 1020 aa10.5□□□□□ -0.73
CLSPN-204ENST00000466308 DPYDQ12882 1025 aa10.5□□□□□ -0.73
CLSPN-204ENST00000466308 OGFOD1Q8N543 542 aa10.5□□□□□ -0.73
CLSPN-204ENST00000466308 C1orf216Q8TAB5 229 aa10.5□□□□□ -0.73
CLSPN-204ENST00000466308 OCSTAMPQ9BR26 566 aa10.5□□□□□ -0.73
CLSPN-204ENST00000466308 EVA1BQ9NVM1 165 aa10.5□□□□□ -0.73
CLSPN-204ENST00000466308 SERPINB4P48594 390 aa10.49□□□□□ -0.73
CLSPN-204ENST00000466308 SIRT1Q96EB6 747 aa10.49□□□□□ -0.73
CLSPN-204ENST00000466308 IGSF5Q9NSI5 407 aa10.49□□□□□ -0.73
CLSPN-204ENST00000466308 PCDHB3Q9Y5E6 796 aa10.49□□□□□ -0.73
CLSPN-204ENST00000466308 MARSP56192 900 aaKnown RBP10.48□□□□□ -0.73
CLSPN-204ENST00000466308 KCNH2Q12809 1159 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms