RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 E9PSI1 815 aa24.01■■□□□ 1.43
LETM1-202ENST00000466175 TMEM94Q12767 1356 aa24.01■■□□□ 1.43
LETM1-202ENST00000466175 KIF20BQ96Q89 1820 aa24■■□□□ 1.43
LETM1-202ENST00000466175 NKTRP30414 1462 aaKnown RBP24■■□□□ 1.43
LETM1-202ENST00000466175 TNNT2P45379 298 aaPredicted RBP23.99■■□□□ 1.43
LETM1-202ENST00000466175 XRN1Q8IZH2 1706 aaKnown RBP23.99■■□□□ 1.43
LETM1-202ENST00000466175 IQSEC2Q5JU85 1478 aa23.98■■□□□ 1.43
LETM1-202ENST00000466175 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.98■■□□□ 1.43
LETM1-202ENST00000466175 UBAP1LF5GYI3 381 aa23.97■■□□□ 1.43
LETM1-202ENST00000466175 RBM19Q9Y4C8 960 aaKnown RBP23.97■■□□□ 1.43
LETM1-202ENST00000466175 FBXO41Q8TF61 875 aa23.96■■□□□ 1.43
LETM1-202ENST00000466175 FYB1O15117 783 aa23.95■■□□□ 1.43
LETM1-202ENST00000466175 WAPLQ7Z5K2 1190 aa23.95■■□□□ 1.43
LETM1-202ENST00000466175 ILDR1Q86SU0 546 aaPredicted RBP23.95■■□□□ 1.43
LETM1-202ENST00000466175 WASLO00401 505 aaPredicted RBP23.95■■□□□ 1.42
LETM1-202ENST00000466175 CABP1Q9NZU7 370 aa23.95■■□□□ 1.42
LETM1-202ENST00000466175 CCDC27Q2M243 656 aa23.94■■□□□ 1.42
LETM1-202ENST00000466175 C14orf37Q86TY3 774 aa23.94■■□□□ 1.42
LETM1-202ENST00000466175 EXOC6Q8TAG9 804 aa23.93■■□□□ 1.42
LETM1-202ENST00000466175 WWC1Q8IX03 1113 aa23.92■■□□□ 1.42
LETM1-202ENST00000466175 GGNBP2Q9H3C7 697 aa23.92■■□□□ 1.42
LETM1-202ENST00000466175 ROBO2Q9HCK4 1378 aa23.91■■□□□ 1.42
LETM1-202ENST00000466175 WDR63Q8IWG1 891 aa23.91■■□□□ 1.42
LETM1-202ENST00000466175 CPSF1Q10570 1443 aaKnown RBP23.9■■□□□ 1.42
LETM1-202ENST00000466175 PHF23Q9BUL5 403 aaPredicted RBP23.9■■□□□ 1.42
LETM1-202ENST00000466175 EDC4Q6P2E9 1401 aaKnown RBP23.9■■□□□ 1.42
LETM1-202ENST00000466175 ADGRB2O60241 1585 aa23.89■■□□□ 1.42
LETM1-202ENST00000466175 COL3A1P02461 1466 aaPredicted RBP23.89■■□□□ 1.42
LETM1-202ENST00000466175 PIP4K2BP78356 416 aa23.89■■□□□ 1.42
LETM1-202ENST00000466175 TCP11L2Q8N4U5 519 aa23.88■■□□□ 1.41
LETM1-202ENST00000466175 PNNQ9H307 717 aaKnown RBP23.88■■□□□ 1.41
LETM1-202ENST00000466175 CDC42BPGQ6DT37 1551 aa23.88■■□□□ 1.41
LETM1-202ENST00000466175 PPIP5K1Q6PFW1 1433 aa23.88■■□□□ 1.41
LETM1-202ENST00000466175 TOM1O60784 492 aa23.87■■□□□ 1.41
LETM1-202ENST00000466175 MSH6P52701 1360 aa23.86■■□□□ 1.41
LETM1-202ENST00000466175 PNPLA6Q8IY17 1366 aa23.86■■□□□ 1.41
LETM1-202ENST00000466175 U2AF1L5P0DN76 240 aaPredicted RBP23.86■■□□□ 1.41
LETM1-202ENST00000466175 U2AF1Q01081 240 aaKnown RBP eCLIP23.86■■□□□ 1.41
LETM1-202ENST00000466175 CCDC61Q9Y6R9 512 aa23.85■■□□□ 1.41
LETM1-202ENST00000466175 PTCH1Q13635 1447 aa23.85■■□□□ 1.41
LETM1-202ENST00000466175 MON2Q7Z3U7 1717 aa23.84■■□□□ 1.41
LETM1-202ENST00000466175 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.84■■□□□ 1.41
LETM1-202ENST00000466175 NUDT16Q96DE0 195 aaKnown RBP23.84■■□□□ 1.41
LETM1-202ENST00000466175 AKAP12Q02952 1782 aa23.83■■□□□ 1.41
LETM1-202ENST00000466175 PLIN1O60240 522 aa23.83■■□□□ 1.41
LETM1-202ENST00000466175 ZNF692Q9BU19 519 aaPredicted RBP23.83■■□□□ 1.41
LETM1-202ENST00000466175 SPINK5Q9NQ38 1064 aaPredicted RBP23.83■■□□□ 1.41
LETM1-202ENST00000466175 ITSN1Q15811 1721 aa23.82■■□□□ 1.4
LETM1-202ENST00000466175 NALCNQ8IZF0 1738 aa23.82■■□□□ 1.4
LETM1-202ENST00000466175 CRBNQ96SW2 442 aa23.82■■□□□ 1.4
LETM1-202ENST00000466175 DIAPH1O60610 1272 aaKnown RBP23.81■■□□□ 1.4
LETM1-202ENST00000466175 C19orf44Q9H6X5 657 aa23.81■■□□□ 1.4
LETM1-202ENST00000466175 NCOA3Q9Y6Q9 1424 aa23.8■■□□□ 1.4
LETM1-202ENST00000466175 AATKQ6ZMQ8 1374 aa23.78■■□□□ 1.4
LETM1-202ENST00000466175 FANCIQ9NVI1 1328 aa23.78■■□□□ 1.4
LETM1-202ENST00000466175 MYH16Q9H6N6 1097 aa23.78■■□□□ 1.4
LETM1-202ENST00000466175 ADGRL3Q9HAR2 1447 aa23.78■■□□□ 1.4
LETM1-202ENST00000466175 ATF3P18847 181 aa23.77■■□□□ 1.4
LETM1-202ENST00000466175 MAPK8IP3Q9UPT6 1336 aa23.77■■□□□ 1.4
LETM1-202ENST00000466175 PLEKHF1Q96S99 279 aa23.77■■□□□ 1.4
LETM1-202ENST00000466175 TOPAZ1Q8N9V7 1692 aa23.76■■□□□ 1.39
LETM1-202ENST00000466175 U2SURPO15042 1029 aaKnown RBP23.76■■□□□ 1.39
LETM1-202ENST00000466175 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.76■■□□□ 1.39
LETM1-202ENST00000466175 CT47B1P0C2W7 299 aaPredicted RBP23.74■■□□□ 1.39
LETM1-202ENST00000466175 NEUROD2Q15784 382 aa23.74■■□□□ 1.39
LETM1-202ENST00000466175 SLAIN2Q9P270 581 aa23.74■■□□□ 1.39
LETM1-202ENST00000466175 FCHSD2O94868 740 aa23.73■■□□□ 1.39
LETM1-202ENST00000466175 PDE3AQ14432 1141 aa23.73■■□□□ 1.39
LETM1-202ENST00000466175 CADPS2Q86UW7 1296 aa23.73■■□□□ 1.39
LETM1-202ENST00000466175 RRP7AQ9Y3A4 280 aaKnown RBP23.73■■□□□ 1.39
LETM1-202ENST00000466175 IL16Q14005 1332 aa23.73■■□□□ 1.39
LETM1-202ENST00000466175 TCERG1O14776 1098 aaKnown RBP23.73■■□□□ 1.39
LETM1-202ENST00000466175 POLKQ9UBT6 870 aa23.73■■□□□ 1.39
LETM1-202ENST00000466175 CDK12Q9NYV4 1490 aaPredicted RBP23.72■■□□□ 1.39
LETM1-202ENST00000466175 MAP2P11137 1827 aaKnown RBP23.72■■□□□ 1.39
LETM1-202ENST00000466175 COG3Q96JB2 828 aa23.72■■□□□ 1.39
LETM1-202ENST00000466175 PLEKHG3A1L390 1219 aa23.71■■□□□ 1.39
LETM1-202ENST00000466175 TMPOP42166 694 aaKnown RBP23.71■■□□□ 1.39
LETM1-202ENST00000466175 C20orf194Q5TEA3 1177 aa23.71■■□□□ 1.39
LETM1-202ENST00000466175 ROBO1Q9Y6N7 1651 aa23.7■■□□□ 1.39
LETM1-202ENST00000466175 NEFMP07197 916 aa23.7■■□□□ 1.38
LETM1-202ENST00000466175 DCCP43146 1447 aa23.69■■□□□ 1.38
LETM1-202ENST00000466175 PRR36Q9H6K5 1346 aa23.69■■□□□ 1.38
LETM1-202ENST00000466175 MS4A1P11836 297 aa23.69■■□□□ 1.38
LETM1-202ENST00000466175 AAMPQ13685 434 aa23.69■■□□□ 1.38
LETM1-202ENST00000466175 NUTM2FA1L443 756 aa23.68■■□□□ 1.38
LETM1-202ENST00000466175 NRKQ7Z2Y5 1582 aa23.68■■□□□ 1.38
LETM1-202ENST00000466175 BCAR3O75815 825 aa23.67■■□□□ 1.38
LETM1-202ENST00000466175 HSPA1LP34931 641 aa23.67■■□□□ 1.38
LETM1-202ENST00000466175 CENPQQ7L2Z9 268 aaPredicted RBP23.67■■□□□ 1.38
LETM1-202ENST00000466175 MST1RQ04912 1400 aa23.67■■□□□ 1.38
LETM1-202ENST00000466175 NME9Q86XW9 330 aa23.66■■□□□ 1.38
LETM1-202ENST00000466175 RARSP54136 660 aaKnown RBP23.65■■□□□ 1.38
LETM1-202ENST00000466175 CANXP27824 592 aaKnown RBP23.63■■□□□ 1.37
LETM1-202ENST00000466175 TRIM35Q9UPQ4 493 aa23.63■■□□□ 1.37
LETM1-202ENST00000466175 KDM2BQ8NHM5 1336 aa23.63■■□□□ 1.37
LETM1-202ENST00000466175 RSPH6AQ9H0K4 717 aa23.62■■□□□ 1.37
LETM1-202ENST00000466175 TTC21BQ7Z4L5 1316 aa23.62■■□□□ 1.37
LETM1-202ENST00000466175 RIPK4P57078 832 aa23.62■■□□□ 1.37
LETM1-202ENST00000466175 ACEP12821 1306 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms