RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 TXNDC2Q86VQ3 553 aa12.33□□□□□ -0.44
UBA3-208ENST00000465627 QRICH2Q9H0J4 1663 aa12.33□□□□□ -0.44
UBA3-208ENST00000465627 TECPR2O15040 1411 aa12.33□□□□□ -0.44
UBA3-208ENST00000465627 BRWD3Q6RI45 1802 aa12.33□□□□□ -0.44
UBA3-208ENST00000465627 EIF3AQ14152 1382 aaKnown RBP12.32□□□□□ -0.44
UBA3-208ENST00000465627 HDGFP51858 240 aaKnown RBP12.31□□□□□ -0.44
UBA3-208ENST00000465627 METP08581 1390 aa12.31□□□□□ -0.44
UBA3-208ENST00000465627 LRPPRCP42704 1394 aaKnown RBP12.31□□□□□ -0.44
UBA3-208ENST00000465627 ABCC11Q96J66 1382 aa12.31□□□□□ -0.44
UBA3-208ENST00000465627 ADAMTS2O95450 1211 aa12.3□□□□□ -0.44
UBA3-208ENST00000465627 DDX10Q13206 875 aaKnown RBP12.3□□□□□ -0.44
UBA3-208ENST00000465627 R3HDM1Q15032 1099 aaKnown RBP12.3□□□□□ -0.44
UBA3-208ENST00000465627 ZNF579Q8NAF0 562 aaKnown RBP12.3□□□□□ -0.44
UBA3-208ENST00000465627 MYOM1P52179 1685 aa12.3□□□□□ -0.44
UBA3-208ENST00000465627 USP21Q9UK80 565 aa12.3□□□□□ -0.44
UBA3-208ENST00000465627 ATRNO75882 1429 aa12.29□□□□□ -0.44
UBA3-208ENST00000465627 PTPRUQ92729 1446 aa12.29□□□□□ -0.44
UBA3-208ENST00000465627 TRPC5Q9UL62 973 aaPredicted RBP12.29□□□□□ -0.44
UBA3-208ENST00000465627 XRN1Q8IZH2 1706 aaKnown RBP12.28□□□□□ -0.44
UBA3-208ENST00000465627 TULP4Q9NRJ4 1543 aa12.28□□□□□ -0.44
UBA3-208ENST00000465627 CENPJQ9HC77 1338 aaPredicted RBP12.28□□□□□ -0.44
UBA3-208ENST00000465627 SLC26A8Q96RN1 970 aa12.28□□□□□ -0.44
UBA3-208ENST00000465627 TRAK1Q9UPV9 953 aa12.28□□□□□ -0.44
UBA3-208ENST00000465627 NKTRP30414 1462 aaKnown RBP12.27□□□□□ -0.44
UBA3-208ENST00000465627 UTRNP46939 3433 aa12.27□□□□□ -0.44
UBA3-208ENST00000465627 SIRT1Q96EB6 747 aa12.27□□□□□ -0.45
UBA3-208ENST00000465627 TBX22Q9Y458 520 aa12.27□□□□□ -0.45
UBA3-208ENST00000465627 EID1Q9Y6B2 187 aa12.27□□□□□ -0.45
UBA3-208ENST00000465627 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.26□□□□□ -0.45
UBA3-208ENST00000465627 POTEIP0CG38 1075 aa12.26□□□□□ -0.45
UBA3-208ENST00000465627 DCBLD2Q96PD2 775 aa12.26□□□□□ -0.45
UBA3-208ENST00000465627 TMF1P82094 1093 aa12.25□□□□□ -0.45
UBA3-208ENST00000465627 SF3B2Q13435 895 aaKnown RBP12.25□□□□□ -0.45
UBA3-208ENST00000465627 PNPLA6Q8IY17 1366 aa12.24□□□□□ -0.45
UBA3-208ENST00000465627 PIK3R4Q99570 1358 aa12.24□□□□□ -0.45
UBA3-208ENST00000465627 CHD2O14647 1828 aaKnown RBP12.24□□□□□ -0.45
UBA3-208ENST00000465627 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
UBA3-208ENST00000465627 PAK3O75914 559 aaPredicted RBP12.24□□□□□ -0.45
UBA3-208ENST00000465627 BRINP3Q76B58 766 aa12.24□□□□□ -0.45
UBA3-208ENST00000465627 MIER1Q8N108 512 aa12.24□□□□□ -0.45
UBA3-208ENST00000465627 PLEKHH1Q9ULM0 1364 aa12.24□□□□□ -0.45
UBA3-208ENST00000465627 CHD4Q14839 1912 aa12.23□□□□□ -0.45
UBA3-208ENST00000465627 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
UBA3-208ENST00000465627 ADGRB2O60241 1585 aa12.23□□□□□ -0.45
UBA3-208ENST00000465627 ROBO2Q9HCK4 1378 aa12.23□□□□□ -0.45
UBA3-208ENST00000465627 PTCH1Q13635 1447 aa12.22□□□□□ -0.45
UBA3-208ENST00000465627 PER1O15534 1290 aaPredicted RBP12.21□□□□□ -0.45
UBA3-208ENST00000465627 PRAM1Q96QH2 718 aa12.21□□□□□ -0.45
UBA3-208ENST00000465627 STK26Q9P289 416 aa12.21□□□□□ -0.45
UBA3-208ENST00000465627 DDX17Q92841 729 aaKnown RBP12.2□□□□□ -0.46
UBA3-208ENST00000465627 CDCA8Q53HL2 280 aa12.19□□□□□ -0.46
UBA3-208ENST00000465627 FNBP4Q8N3X1 1017 aaPredicted RBP12.19□□□□□ -0.46
UBA3-208ENST00000465627 WAPLQ7Z5K2 1190 aa12.18□□□□□ -0.46
UBA3-208ENST00000465627 GLI3P10071 1580 aa12.17□□□□□ -0.46
UBA3-208ENST00000465627 EVC2Q86UK5 1308 aa12.16□□□□□ -0.46
UBA3-208ENST00000465627 EN1Q05925 392 aaPredicted RBP12.16□□□□□ -0.46
UBA3-208ENST00000465627 C14orf37Q86TY3 774 aa12.16□□□□□ -0.46
UBA3-208ENST00000465627 LRRC59Q96AG4 307 aaKnown RBP12.16□□□□□ -0.46
UBA3-208ENST00000465627 AMOTL2Q9Y2J4 779 aa12.16□□□□□ -0.46
UBA3-208ENST00000465627 CD163L1Q9NR16 1453 aa12.15□□□□□ -0.46
UBA3-208ENST00000465627 BAG6P46379 1132 aa12.15□□□□□ -0.46
UBA3-208ENST00000465627 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
UBA3-208ENST00000465627 POGKQ9P215 609 aa12.15□□□□□ -0.46
UBA3-208ENST00000465627 PCDH10Q9P2E7 1040 aa12.15□□□□□ -0.46
UBA3-208ENST00000465627 MINK1Q8N4C8 1332 aaPredicted RBP12.14□□□□□ -0.47
UBA3-208ENST00000465627 USP32Q8NFA0 1604 aa12.14□□□□□ -0.47
UBA3-208ENST00000465627 TOPAZ1Q8N9V7 1692 aa12.14□□□□□ -0.47
UBA3-208ENST00000465627 GIGYF1O75420 1035 aaPredicted RBP12.14□□□□□ -0.47
UBA3-208ENST00000465627 SAFB2Q14151 953 aaKnown RBP eCLIP12.14□□□□□ -0.47
UBA3-208ENST00000465627 CADPS2Q86UW7 1296 aa12.14□□□□□ -0.47
UBA3-208ENST00000465627 BCANQ96GW7 911 aa12.14□□□□□ -0.47
UBA3-208ENST00000465627 PRKRIP1Q9H875 184 aaPredicted RBP12.14□□□□□ -0.47
UBA3-208ENST00000465627 PANK3Q9H999 370 aa12.14□□□□□ -0.47
UBA3-208ENST00000465627 NPC1L1Q9UHC9 1359 aa12.13□□□□□ -0.47
UBA3-208ENST00000465627 NINLQ9Y2I6 1382 aa12.13□□□□□ -0.47
UBA3-208ENST00000465627 NALCNQ8IZF0 1738 aa12.13□□□□□ -0.47
UBA3-208ENST00000465627 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
UBA3-208ENST00000465627 ATF3P18847 181 aa12.13□□□□□ -0.47
UBA3-208ENST00000465627 POLR3GLQ9BT43 218 aa12.13□□□□□ -0.47
UBA3-208ENST00000465627 ATP7BP35670 1465 aa12.13□□□□□ -0.47
UBA3-208ENST00000465627 WASLO00401 505 aaPredicted RBP12.12□□□□□ -0.47
UBA3-208ENST00000465627 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
UBA3-208ENST00000465627 CDK19Q9BWU1 502 aa12.12□□□□□ -0.47
UBA3-208ENST00000465627 CARD14Q9BXL6 1004 aa12.12□□□□□ -0.47
UBA3-208ENST00000465627 CABP2Q9NPB3 220 aa12.12□□□□□ -0.47
UBA3-208ENST00000465627 PPP1R1BQ9UD71 204 aaPredicted RBP12.12□□□□□ -0.47
UBA3-208ENST00000465627 PARD3Q8TEW0 1356 aa12.12□□□□□ -0.47
UBA3-208ENST00000465627 CCER2I3L3R5 266 aa12.11□□□□□ -0.47
UBA3-208ENST00000465627 ANP32CO43423 234 aa12.11□□□□□ -0.47
UBA3-208ENST00000465627 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
UBA3-208ENST00000465627 KTN1Q86UP2 1357 aaKnown RBP12.11□□□□□ -0.47
UBA3-208ENST00000465627 FMN2Q9NZ56 1722 aa12.1□□□□□ -0.47
UBA3-208ENST00000465627 SLC12A5Q9H2X9 1139 aa12.1□□□□□ -0.47
UBA3-208ENST00000465627 CDC42BPGQ6DT37 1551 aa12.1□□□□□ -0.47
UBA3-208ENST00000465627 PRR36Q9H6K5 1346 aa12.1□□□□□ -0.47
UBA3-208ENST00000465627 ANKRD36BQ8N2N9 1353 aa12.1□□□□□ -0.47
UBA3-208ENST00000465627 MARF1Q9Y4F3 1742 aaKnown RBP12.1□□□□□ -0.47
UBA3-208ENST00000465627 PROM2Q8N271 834 aa12.09□□□□□ -0.47
UBA3-208ENST00000465627 PHF12Q96QT6 1004 aa12.09□□□□□ -0.47
UBA3-208ENST00000465627 C19orf44Q9H6X5 657 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms