RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 PARD3Q8TEW0 1356 aa11.42□□□□□ -0.58
UBE4B-205ENST00000465408 NBPF14Q5TI25 921 aa11.42□□□□□ -0.58
UBE4B-205ENST00000465408 NALCNQ8IZF0 1738 aa11.42□□□□□ -0.58
UBE4B-205ENST00000465408 CNGB1Q14028 1251 aaPredicted RBP11.41□□□□□ -0.58
UBE4B-205ENST00000465408 SYT17Q9BSW7 474 aa11.41□□□□□ -0.58
UBE4B-205ENST00000465408 FHDC1Q9C0D6 1143 aaPredicted RBP11.41□□□□□ -0.58
UBE4B-205ENST00000465408 TMEM131LA2VDJ0 1609 aa11.4□□□□□ -0.58
UBE4B-205ENST00000465408 TRIM37O94972 964 aa11.4□□□□□ -0.58
UBE4B-205ENST00000465408 APBA3O96018 575 aa11.4□□□□□ -0.58
UBE4B-205ENST00000465408 FAM98CQ17RN3 349 aaKnown RBP11.4□□□□□ -0.58
UBE4B-205ENST00000465408 PRKRIP1Q9H875 184 aaPredicted RBP11.4□□□□□ -0.58
UBE4B-205ENST00000465408 GOLGB1Q14789 3259 aaKnown RBP11.4□□□□□ -0.59
UBE4B-205ENST00000465408 ADGRF5Q8IZF2 1346 aa11.39□□□□□ -0.59
UBE4B-205ENST00000465408 FAM83GA6ND36 823 aa11.39□□□□□ -0.59
UBE4B-205ENST00000465408 CCDC184Q52MB2 194 aa11.39□□□□□ -0.59
UBE4B-205ENST00000465408 PXDNQ92626 1479 aa11.38□□□□□ -0.59
UBE4B-205ENST00000465408 PTGER2P43116 358 aa11.38□□□□□ -0.59
UBE4B-205ENST00000465408 STAC3Q96MF2 364 aa11.38□□□□□ -0.59
UBE4B-205ENST00000465408 TESK2Q96S53 571 aa11.38□□□□□ -0.59
UBE4B-205ENST00000465408 PLCH1Q4KWH8 1693 aa11.38□□□□□ -0.59
UBE4B-205ENST00000465408 CASZ1Q86V15 1759 aa11.38□□□□□ -0.59
UBE4B-205ENST00000465408 USP32Q8NFA0 1604 aa11.38□□□□□ -0.59
UBE4B-205ENST00000465408 HDGFP51858 240 aaKnown RBP11.37□□□□□ -0.59
UBE4B-205ENST00000465408 CFAP70Q5T0N1 1121 aa11.37□□□□□ -0.59
UBE4B-205ENST00000465408 PDGFDQ9GZP0 370 aaPredicted RBP11.37□□□□□ -0.59
UBE4B-205ENST00000465408 KIF1BO60333 1816 aa11.37□□□□□ -0.59
UBE4B-205ENST00000465408 DLC1Q96QB1 1528 aa11.36□□□□□ -0.59
UBE4B-205ENST00000465408 XPCQ01831 940 aaPredicted RBP11.36□□□□□ -0.59
UBE4B-205ENST00000465408 SLC52A1Q9NWF4 448 aa11.36□□□□□ -0.59
UBE4B-205ENST00000465408 NWD2Q9ULI1 1742 aa11.35□□□□□ -0.59
UBE4B-205ENST00000465408 ZBTB7AO95365 584 aa11.35□□□□□ -0.59
UBE4B-205ENST00000465408 DNAJC5GQ8N7S2 189 aa11.35□□□□□ -0.59
UBE4B-205ENST00000465408 IFT172Q9UG01 1749 aa11.35□□□□□ -0.59
UBE4B-205ENST00000465408 NRXN1Q9ULB1 1477 aa11.34□□□□□ -0.59
UBE4B-205ENST00000465408 TMF1P82094 1093 aa11.34□□□□□ -0.59
UBE4B-205ENST00000465408 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.34□□□□□ -0.59
UBE4B-205ENST00000465408 MRS2Q9HD23 443 aa11.34□□□□□ -0.59
UBE4B-205ENST00000465408 NPHP3Q7Z494 1330 aa11.33□□□□□ -0.6
UBE4B-205ENST00000465408 KIAA1210Q9ULL0 1709 aa11.32□□□□□ -0.6
UBE4B-205ENST00000465408 ATF5Q9Y2D1 282 aaPredicted RBP11.32□□□□□ -0.6
UBE4B-205ENST00000465408 THSD7AQ9UPZ6 1657 aa11.31□□□□□ -0.6
UBE4B-205ENST00000465408 HNRNPUQ00839 825 aaKnown RBP eCLIP11.31□□□□□ -0.6
UBE4B-205ENST00000465408 GPR162Q16538 588 aa11.31□□□□□ -0.6
UBE4B-205ENST00000465408 FAM9BQ8IZU0 186 aa11.31□□□□□ -0.6
UBE4B-205ENST00000465408 ANO8Q9HCE9 1232 aaPredicted RBP11.31□□□□□ -0.6
UBE4B-205ENST00000465408 RPGRIP1LQ68CZ1 1315 aa11.31□□□□□ -0.6
UBE4B-205ENST00000465408 EIF3AQ14152 1382 aaKnown RBP11.3□□□□□ -0.6
UBE4B-205ENST00000465408 PIK3C2GO75747 1445 aa11.3□□□□□ -0.6
UBE4B-205ENST00000465408 ATP10DQ9P241 1426 aa11.3□□□□□ -0.6
UBE4B-205ENST00000465408 NRXN3Q9Y4C0 1643 aa11.3□□□□□ -0.6
UBE4B-205ENST00000465408 NEXMIFQ5QGS0 1516 aa11.3□□□□□ -0.6
UBE4B-205ENST00000465408 METP08581 1390 aa11.29□□□□□ -0.6
UBE4B-205ENST00000465408 NRAPQ86VF7 1730 aa11.29□□□□□ -0.6
UBE4B-205ENST00000465408 PPLO60437 1756 aa11.29□□□□□ -0.6
UBE4B-205ENST00000465408 FAM196AQ6ZSG2 479 aa11.29□□□□□ -0.6
UBE4B-205ENST00000465408 PCNTO95613 3336 aa11.28□□□□□ -0.6
UBE4B-205ENST00000465408 FOXO3O43524 673 aa11.28□□□□□ -0.6
UBE4B-205ENST00000465408 C14orf93Q9H972 538 aaKnown RBP11.28□□□□□ -0.6
UBE4B-205ENST00000465408 PANK3Q9H999 370 aa11.28□□□□□ -0.6
UBE4B-205ENST00000465408 APLP1P51693 650 aa11.27□□□□□ -0.61
UBE4B-205ENST00000465408 TMEM132EQ6IEE7 984 aa11.27□□□□□ -0.61
UBE4B-205ENST00000465408 CABLES1Q8TDN4 633 aa11.27□□□□□ -0.61
UBE4B-205ENST00000465408 KTN1Q86UP2 1357 aaKnown RBP11.27□□□□□ -0.61
UBE4B-205ENST00000465408 ADGRB1O14514 1584 aa11.26□□□□□ -0.61
UBE4B-205ENST00000465408 ESCO1Q5FWF5 840 aa11.26□□□□□ -0.61
UBE4B-205ENST00000465408 SGIP1Q9BQI5 828 aa11.26□□□□□ -0.61
UBE4B-205ENST00000465408 GPBP1L1Q9HC44 474 aaPredicted RBP11.26□□□□□ -0.61
UBE4B-205ENST00000465408 WWC3Q9ULE0 1092 aa11.26□□□□□ -0.61
UBE4B-205ENST00000465408 TRAK1Q9UPV9 953 aa11.26□□□□□ -0.61
UBE4B-205ENST00000465408 SPATA31A3Q5VYP0 1347 aa11.26□□□□□ -0.61
UBE4B-205ENST00000465408 PER1O15534 1290 aaPredicted RBP11.25□□□□□ -0.61
UBE4B-205ENST00000465408 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
UBE4B-205ENST00000465408 HAP1P54257 671 aaPredicted RBP11.25□□□□□ -0.61
UBE4B-205ENST00000465408 RALBP1Q15311 655 aa11.25□□□□□ -0.61
UBE4B-205ENST00000465408 MYBBP1AQ9BQG0 1328 aaKnown RBP11.25□□□□□ -0.61
UBE4B-205ENST00000465408 MAP3K5Q99683 1374 aa11.25□□□□□ -0.61
UBE4B-205ENST00000465408 VGFO15240 615 aaPredicted RBP11.24□□□□□ -0.61
UBE4B-205ENST00000465408 CDCA8Q53HL2 280 aa11.24□□□□□ -0.61
UBE4B-205ENST00000465408 CC2D1BQ5T0F9 858 aaKnown RBP11.24□□□□□ -0.61
UBE4B-205ENST00000465408 PELP1Q8IZL8 1130 aaKnown RBP11.24□□□□□ -0.61
UBE4B-205ENST00000465408 SPATA31A5Q5VU36 1347 aa11.24□□□□□ -0.61
UBE4B-205ENST00000465408 SPATA31A7Q8IWB4 1347 aa11.24□□□□□ -0.61
UBE4B-205ENST00000465408 CENPJQ9HC77 1338 aaPredicted RBP11.24□□□□□ -0.61
UBE4B-205ENST00000465408 TMC1Q8TDI8 760 aa11.23□□□□□ -0.61
UBE4B-205ENST00000465408 ZNF526Q8TF50 670 aaPredicted RBP11.23□□□□□ -0.61
UBE4B-205ENST00000465408 BRD4O60885 1362 aaPredicted RBP11.22□□□□□ -0.61
UBE4B-205ENST00000465408 ABCA3Q99758 1704 aa11.22□□□□□ -0.61
UBE4B-205ENST00000465408 JMYQ8N9B5 988 aa11.21□□□□□ -0.61
UBE4B-205ENST00000465408 ARXQ96QS3 562 aa11.21□□□□□ -0.61
UBE4B-205ENST00000465408 BTG4Q9NY30 223 aa11.21□□□□□ -0.61
UBE4B-205ENST00000465408 TNS2Q63HR2 1409 aa11.2□□□□□ -0.62
UBE4B-205ENST00000465408 SBNO2Q9Y2G9 1366 aa11.2□□□□□ -0.62
UBE4B-205ENST00000465408 PNISRQ8TF01 805 aaKnown RBP11.2□□□□□ -0.62
UBE4B-205ENST00000465408 LRPPRCP42704 1394 aaKnown RBP11.19□□□□□ -0.62
UBE4B-205ENST00000465408 ROBO2Q9HCK4 1378 aa11.19□□□□□ -0.62
UBE4B-205ENST00000465408 NLRP13Q86W25 1043 aa11.19□□□□□ -0.62
UBE4B-205ENST00000465408 MTFR1LQ9H019 292 aa11.19□□□□□ -0.62
UBE4B-205ENST00000465408 STK26Q9P289 416 aa11.19□□□□□ -0.62
UBE4B-205ENST00000465408 KNSTRNQ9Y448 316 aa11.19□□□□□ -0.62
UBE4B-205ENST00000465408 SUPT16HQ9Y5B9 1047 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms