RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 TULP4Q9NRJ4 1543 aa17.88■□□□□ 0.45
TRA2B-208ENST00000465245 SPATA31A5Q5VU36 1347 aa17.88■□□□□ 0.45
TRA2B-208ENST00000465245 SPATA31A7Q8IWB4 1347 aa17.88■□□□□ 0.45
TRA2B-208ENST00000465245 DISP2A7MBM2 1401 aa17.88■□□□□ 0.45
TRA2B-208ENST00000465245 ADGRB1O14514 1584 aa17.87■□□□□ 0.45
TRA2B-208ENST00000465245 R3HDM1Q15032 1099 aaKnown RBP17.87■□□□□ 0.45
TRA2B-208ENST00000465245 ACIN1Q9UKV3 1341 aaKnown RBP17.87■□□□□ 0.45
TRA2B-208ENST00000465245 EIF3AQ14152 1382 aaKnown RBP17.87■□□□□ 0.45
TRA2B-208ENST00000465245 ITSN1Q15811 1721 aa17.86■□□□□ 0.45
TRA2B-208ENST00000465245 HIRIP3Q9BW71 556 aaPredicted RBP17.86■□□□□ 0.45
TRA2B-208ENST00000465245 PHRF1Q9P1Y6 1649 aaKnown RBP17.86■□□□□ 0.45
TRA2B-208ENST00000465245 PRR36Q9H6K5 1346 aa17.84■□□□□ 0.45
TRA2B-208ENST00000465245 PRDM11Q9NQV5 511 aa17.84■□□□□ 0.45
TRA2B-208ENST00000465245 MINK1Q8N4C8 1332 aaPredicted RBP17.83■□□□□ 0.44
TRA2B-208ENST00000465245 PAK3O75914 559 aaPredicted RBP17.83■□□□□ 0.44
TRA2B-208ENST00000465245 TRAK1Q9UPV9 953 aa17.83■□□□□ 0.44
TRA2B-208ENST00000465245 EZH2Q15910 746 aaKnown RBP17.82■□□□□ 0.44
TRA2B-208ENST00000465245 RREB1Q92766 1687 aa17.81■□□□□ 0.44
TRA2B-208ENST00000465245 NGDNQ8NEJ9 315 aaKnown RBP17.81■□□□□ 0.44
TRA2B-208ENST00000465245 SPATA31A1Q5TZJ5 1347 aa17.8■□□□□ 0.44
TRA2B-208ENST00000465245 ARHGEF28Q8N1W1 1705 aaKnown RBP17.8■□□□□ 0.44
TRA2B-208ENST00000465245 KIAA0232Q92628 1395 aa17.79■□□□□ 0.44
TRA2B-208ENST00000465245 NUP188Q5SRE5 1749 aa17.79■□□□□ 0.44
TRA2B-208ENST00000465245 WASLO00401 505 aaPredicted RBP17.79■□□□□ 0.44
TRA2B-208ENST00000465245 TRIM37O94972 964 aa17.79■□□□□ 0.44
TRA2B-208ENST00000465245 FAM196AQ6ZSG2 479 aa17.78■□□□□ 0.44
TRA2B-208ENST00000465245 STRN4Q9NRL3 753 aa17.78■□□□□ 0.44
TRA2B-208ENST00000465245 ATP7BP35670 1465 aa17.77■□□□□ 0.44
TRA2B-208ENST00000465245 CHRNA2Q15822 529 aa17.77■□□□□ 0.44
TRA2B-208ENST00000465245 CAMKK2Q96RR4 588 aa17.77■□□□□ 0.44
TRA2B-208ENST00000465245 PARD3Q8TEW0 1356 aa17.77■□□□□ 0.43
TRA2B-208ENST00000465245 APBA3O96018 575 aa17.76■□□□□ 0.43
TRA2B-208ENST00000465245 TOPAZ1Q8N9V7 1692 aa17.74■□□□□ 0.43
TRA2B-208ENST00000465245 USP35Q9P2H5 1018 aa17.74■□□□□ 0.43
TRA2B-208ENST00000465245 NRKQ7Z2Y5 1582 aa17.74■□□□□ 0.43
TRA2B-208ENST00000465245 KDM2AQ9Y2K7 1162 aa17.73■□□□□ 0.43
TRA2B-208ENST00000465245 SSH2Q76I76 1423 aa17.72■□□□□ 0.43
TRA2B-208ENST00000465245 ZC3H6P61129 1189 aaKnown RBP17.72■□□□□ 0.43
TRA2B-208ENST00000465245 LMO7Q8WWI1 1683 aa17.71■□□□□ 0.43
TRA2B-208ENST00000465245 PDE3BQ13370 1112 aa17.71■□□□□ 0.43
TRA2B-208ENST00000465245 NUTM2GQ5VZR2 741 aa17.71■□□□□ 0.43
TRA2B-208ENST00000465245 DCAF11Q8TEB1 546 aa17.71■□□□□ 0.43
TRA2B-208ENST00000465245 NUDT16Q96DE0 195 aaKnown RBP17.71■□□□□ 0.43
TRA2B-208ENST00000465245 PARP4Q9UKK3 1724 aaKnown RBP17.7■□□□□ 0.42
TRA2B-208ENST00000465245 EVA1CP58658 441 aa17.7■□□□□ 0.42
TRA2B-208ENST00000465245 CAMTA1Q9Y6Y1 1673 aa17.69■□□□□ 0.42
TRA2B-208ENST00000465245 NBPF8Q3BBV2 869 aa17.69■□□□□ 0.42
TRA2B-208ENST00000465245 NBPF14Q5TI25 921 aa17.69■□□□□ 0.42
TRA2B-208ENST00000465245 BARGINQ6ZT62 677 aa17.69■□□□□ 0.42
TRA2B-208ENST00000465245 YY1P25490 414 aa17.68■□□□□ 0.42
TRA2B-208ENST00000465245 RAB3GAP2Q9H2M9 1393 aa17.67■□□□□ 0.42
TRA2B-208ENST00000465245 POLR3AO14802 1390 aaPredicted RBP17.66■□□□□ 0.42
TRA2B-208ENST00000465245 RGPD3A6NKT7 1758 aaPredicted RBP17.66■□□□□ 0.42
TRA2B-208ENST00000465245 RGPD4Q7Z3J3 1758 aa17.66■□□□□ 0.42
TRA2B-208ENST00000465245 LARP1Q6PKG0 1096 aaKnown RBP17.66■□□□□ 0.42
TRA2B-208ENST00000465245 TCP11L2Q8N4U5 519 aa17.66■□□□□ 0.42
TRA2B-208ENST00000465245 PPP1R1BQ9UD71 204 aaPredicted RBP17.66■□□□□ 0.42
TRA2B-208ENST00000465245 ACEP12821 1306 aa17.66■□□□□ 0.42
TRA2B-208ENST00000465245 CPDO75976 1380 aa17.66■□□□□ 0.42
TRA2B-208ENST00000465245 CDK19Q9BWU1 502 aa17.65■□□□□ 0.42
TRA2B-208ENST00000465245 SBF2Q86WG5 1849 aa17.65■□□□□ 0.42
TRA2B-208ENST00000465245 ABTB2Q8N961 1025 aa17.64■□□□□ 0.41
TRA2B-208ENST00000465245 STAC3Q96MF2 364 aa17.64■□□□□ 0.41
TRA2B-208ENST00000465245 SPON1Q9HCB6 807 aa17.63■□□□□ 0.41
TRA2B-208ENST00000465245 THRAP3Q9Y2W1 955 aaKnown RBP17.63■□□□□ 0.41
TRA2B-208ENST00000465245 USP19O94966 1318 aa17.63■□□□□ 0.41
TRA2B-208ENST00000465245 PEAK1Q9H792 1746 aa17.63■□□□□ 0.41
TRA2B-208ENST00000465245 COL5A2P05997 1499 aaPredicted RBP17.63■□□□□ 0.41
TRA2B-208ENST00000465245 LRRC37A3O60309 1634 aa17.62■□□□□ 0.41
TRA2B-208ENST00000465245 KIAA1210Q9ULL0 1709 aa17.62■□□□□ 0.41
TRA2B-208ENST00000465245 CCDC61Q9Y6R9 512 aa17.62■□□□□ 0.41
TRA2B-208ENST00000465245 NINLQ9Y2I6 1382 aa17.62■□□□□ 0.41
TRA2B-208ENST00000465245 WNK3Q9BYP7 1800 aa17.61■□□□□ 0.41
TRA2B-208ENST00000465245 KCNQ2O43526 872 aa17.61■□□□□ 0.41
TRA2B-208ENST00000465245 OVOS2A0A0G2JMS6 1433 aa17.61■□□□□ 0.41
TRA2B-208ENST00000465245 OVOS2A0A0J9YW53 1432 aa17.61■□□□□ 0.41
TRA2B-208ENST00000465245 OVOS2Q6IE36 1432 aa17.61■□□□□ 0.41
TRA2B-208ENST00000465245 PLEKHG3A1L390 1219 aa17.6■□□□□ 0.41
TRA2B-208ENST00000465245 DCAF8L1A6NGE4 600 aa17.6■□□□□ 0.41
TRA2B-208ENST00000465245 CASZ1Q86V15 1759 aa17.6■□□□□ 0.41
TRA2B-208ENST00000465245 AKAP12Q02952 1782 aa17.59■□□□□ 0.41
TRA2B-208ENST00000465245 CRB1P82279 1406 aa17.59■□□□□ 0.41
TRA2B-208ENST00000465245 C11orf95C9JLR9 678 aaPredicted RBP17.59■□□□□ 0.41
TRA2B-208ENST00000465245 NLRP13Q86W25 1043 aa17.58■□□□□ 0.4
TRA2B-208ENST00000465245 PPIP5K1Q6PFW1 1433 aa17.57■□□□□ 0.4
TRA2B-208ENST00000465245 GCP02774 474 aa17.57■□□□□ 0.4
TRA2B-208ENST00000465245 ZBTB7CA1YPR0 619 aa17.56■□□□□ 0.4
TRA2B-208ENST00000465245 QRICH2Q9H0J4 1663 aa17.55■□□□□ 0.4
TRA2B-208ENST00000465245 SRPK2P78362 688 aaKnown RBP17.54■□□□□ 0.4
TRA2B-208ENST00000465245 MYOM1P52179 1685 aa17.54■□□□□ 0.4
TRA2B-208ENST00000465245 UTRNP46939 3433 aa17.54■□□□□ 0.4
TRA2B-208ENST00000465245 SLIT3O75094 1523 aa17.53■□□□□ 0.4
TRA2B-208ENST00000465245 DDB1Q16531 1140 aa17.53■□□□□ 0.4
TRA2B-208ENST00000465245 ANO8Q9HCE9 1232 aaPredicted RBP17.53■□□□□ 0.4
TRA2B-208ENST00000465245 COL18A1P39060 1754 aa17.53■□□□□ 0.4
TRA2B-208ENST00000465245 BRD4O60885 1362 aaPredicted RBP17.53■□□□□ 0.4
TRA2B-208ENST00000465245 PIK3C2AO00443 1686 aa17.52■□□□□ 0.4
TRA2B-208ENST00000465245 PLSCR1O15162 318 aa17.52■□□□□ 0.4
TRA2B-208ENST00000465245 RGPD5Q99666 1765 aa17.52■□□□□ 0.4
TRA2B-208ENST00000465245 AATKQ6ZMQ8 1374 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms