RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 ATP7BP35670 1465 aa33.08■■■□□ 2.89
USP42-205ENST00000465073 BRWD3Q6RI45 1802 aa33.08■■■□□ 2.89
USP42-205ENST00000465073 SF3B2Q13435 895 aaKnown RBP33.05■■■□□ 2.88
USP42-205ENST00000465073 COL14A1Q05707 1796 aaKnown RBP33.04■■■□□ 2.88
USP42-205ENST00000465073 SRCAPQ6ZRS2 3230 aa33.03■■■□□ 2.88
USP42-205ENST00000465073 A0A0G2JS52 829 aa33.03■■■□□ 2.88
USP42-205ENST00000465073 MYT1Q01538 1121 aa33.03■■■□□ 2.88
USP42-205ENST00000465073 FAM98CQ17RN3 349 aaKnown RBP33.02■■■□□ 2.88
USP42-205ENST00000465073 PRDM11Q9NQV5 511 aa33.02■■■□□ 2.88
USP42-205ENST00000465073 CCDC61Q9Y6R9 512 aa33.02■■■□□ 2.88
USP42-205ENST00000465073 ITSN1Q15811 1721 aa33.02■■■□□ 2.88
USP42-205ENST00000465073 NRAPQ86VF7 1730 aa33.02■■■□□ 2.88
USP42-205ENST00000465073 KIAA1210Q9ULL0 1709 aa33.01■■■□□ 2.88
USP42-205ENST00000465073 NBPF1Q3BBV0 1214 aa32.99■■■□□ 2.87
USP42-205ENST00000465073 DEFB132Q7Z7B7 95 aa32.99■■■□□ 2.87
USP42-205ENST00000465073 POLR3AO14802 1390 aaPredicted RBP32.98■■■□□ 2.87
USP42-205ENST00000465073 SPATA31A5Q5VU36 1347 aa32.98■■■□□ 2.87
USP42-205ENST00000465073 SPATA31A7Q8IWB4 1347 aa32.98■■■□□ 2.87
USP42-205ENST00000465073 PLEKHG3A1L390 1219 aa32.98■■■□□ 2.87
USP42-205ENST00000465073 ACEP12821 1306 aa32.97■■■□□ 2.87
USP42-205ENST00000465073 NBPF8Q3BBV2 869 aa32.97■■■□□ 2.87
USP42-205ENST00000465073 CRYBG1Q9Y4K1 1723 aa32.96■■■□□ 2.87
USP42-205ENST00000465073 KIAA0232Q92628 1395 aa32.94■■■□□ 2.86
USP42-205ENST00000465073 NUTM2GQ5VZR2 741 aa32.92■■■□□ 2.86
USP42-205ENST00000465073 CENPJQ9HC77 1338 aaPredicted RBP32.9■■■□□ 2.86
USP42-205ENST00000465073 TOPAZ1Q8N9V7 1692 aa32.89■■■□□ 2.86
USP42-205ENST00000465073 ZC3H6P61129 1189 aaKnown RBP32.89■■■□□ 2.86
USP42-205ENST00000465073 CHRNA2Q15822 529 aa32.89■■■□□ 2.86
USP42-205ENST00000465073 SRPK2P78362 688 aaKnown RBP32.88■■■□□ 2.85
USP42-205ENST00000465073 BAG6P46379 1132 aa32.87■■■□□ 2.85
USP42-205ENST00000465073 ABTB2Q8N961 1025 aa32.86■■■□□ 2.85
USP42-205ENST00000465073 SPATA31A1Q5TZJ5 1347 aa32.86■■■□□ 2.85
USP42-205ENST00000465073 PHRF1Q9P1Y6 1649 aaKnown RBP32.84■■■□□ 2.85
USP42-205ENST00000465073 STRN4Q9NRL3 753 aa32.84■■■□□ 2.85
USP42-205ENST00000465073 L3MBTL2Q969R5 705 aa32.82■■■□□ 2.84
USP42-205ENST00000465073 CABP2Q9NPB3 220 aa32.82■■■□□ 2.84
USP42-205ENST00000465073 PPIP5K1Q6PFW1 1433 aa32.82■■■□□ 2.84
USP42-205ENST00000465073 THSD7AQ9UPZ6 1657 aa32.81■■■□□ 2.84
USP42-205ENST00000465073 EVA1CP58658 441 aa32.8■■■□□ 2.84
USP42-205ENST00000465073 FAM182BQ5T319 152 aa32.8■■■□□ 2.84
USP42-205ENST00000465073 USP19O94966 1318 aa32.8■■■□□ 2.84
USP42-205ENST00000465073 NLRP13Q86W25 1043 aa32.8■■■□□ 2.84
USP42-205ENST00000465073 BRD4O60885 1362 aaPredicted RBP32.78■■■□□ 2.84
USP42-205ENST00000465073 CPDO75976 1380 aa32.78■■■□□ 2.84
USP42-205ENST00000465073 SSH2Q76I76 1423 aa32.75■■■□□ 2.83
USP42-205ENST00000465073 GCP02774 474 aa32.74■■■□□ 2.83
USP42-205ENST00000465073 BARGINQ6ZT62 677 aa32.74■■■□□ 2.83
USP42-205ENST00000465073 CABP1Q9NZU7 370 aa32.74■■■□□ 2.83
USP42-205ENST00000465073 NRKQ7Z2Y5 1582 aa32.74■■■□□ 2.83
USP42-205ENST00000465073 USP35Q9P2H5 1018 aa32.74■■■□□ 2.83
USP42-205ENST00000465073 EN1Q05925 392 aaPredicted RBP32.73■■■□□ 2.83
USP42-205ENST00000465073 FAM196AQ6ZSG2 479 aa32.73■■■□□ 2.83
USP42-205ENST00000465073 SIN3AQ96ST3 1273 aa32.72■■■□□ 2.83
USP42-205ENST00000465073 QRICH2Q9H0J4 1663 aa32.71■■■□□ 2.83
USP42-205ENST00000465073 CAMTA1Q9Y6Y1 1673 aa32.71■■■□□ 2.83
USP42-205ENST00000465073 LARP1Q6PKG0 1096 aaKnown RBP32.71■■■□□ 2.83
USP42-205ENST00000465073 RGPD1P0DJD0 1748 aa32.71■■■□□ 2.83
USP42-205ENST00000465073 EVC2Q86UK5 1308 aa32.7■■■□□ 2.82
USP42-205ENST00000465073 DISP2A7MBM2 1401 aa32.69■■■□□ 2.82
USP42-205ENST00000465073 TCP11L2Q8N4U5 519 aa32.69■■■□□ 2.82
USP42-205ENST00000465073 USP6P35125 1406 aa32.68■■■□□ 2.82
USP42-205ENST00000465073 PDE3BQ13370 1112 aa32.67■■■□□ 2.82
USP42-205ENST00000465073 NEUROD1Q13562 356 aa32.67■■■□□ 2.82
USP42-205ENST00000465073 PSDA5PKW4 1024 aaPredicted RBP32.66■■■□□ 2.82
USP42-205ENST00000465073 NLRP6P59044 892 aa32.66■■■□□ 2.82
USP42-205ENST00000465073 THRAP3Q9Y2W1 955 aaKnown RBP32.66■■■□□ 2.82
USP42-205ENST00000465073 LMO7Q8WWI1 1683 aa32.66■■■□□ 2.82
USP42-205ENST00000465073 TRIM37O94972 964 aa32.65■■■□□ 2.82
USP42-205ENST00000465073 ROCK2O75116 1388 aaKnown RBP32.63■■■□□ 2.81
USP42-205ENST00000465073 TRPM1Q7Z4N2 1603 aa32.62■■■□□ 2.81
USP42-205ENST00000465073 TNS1Q9HBL0 1735 aaKnown RBP32.6■■■□□ 2.81
USP42-205ENST00000465073 EZH2Q15910 746 aaKnown RBP32.6■■■□□ 2.81
USP42-205ENST00000465073 CAMKK2Q96RR4 588 aa32.6■■■□□ 2.81
USP42-205ENST00000465073 ZNF692Q9BU19 519 aaPredicted RBP32.6■■■□□ 2.81
USP42-205ENST00000465073 COL5A2P05997 1499 aaPredicted RBP32.59■■■□□ 2.81
USP42-205ENST00000465073 AATKQ6ZMQ8 1374 aa32.59■■■□□ 2.81
USP42-205ENST00000465073 LRP5O75197 1615 aa32.58■■■□□ 2.81
USP42-205ENST00000465073 APBA3O96018 575 aa32.58■■■□□ 2.81
USP42-205ENST00000465073 ZBTB7CA1YPR0 619 aa32.57■■■□□ 2.8
USP42-205ENST00000465073 SLIT3O75094 1523 aa32.56■■■□□ 2.8
USP42-205ENST00000465073 PARD3Q8TEW0 1356 aa32.56■■■□□ 2.8
USP42-205ENST00000465073 R3HDM1Q15032 1099 aaKnown RBP32.55■■■□□ 2.8
USP42-205ENST00000465073 CRB1P82279 1406 aa32.55■■■□□ 2.8
USP42-205ENST00000465073 TTC21BQ7Z4L5 1316 aa32.52■■■□□ 2.8
USP42-205ENST00000465073 C11orf95C9JLR9 678 aaPredicted RBP32.52■■■□□ 2.8
USP42-205ENST00000465073 KCNH5Q8NCM2 988 aa32.5■■■□□ 2.79
USP42-205ENST00000465073 PIK3C2AO00443 1686 aa32.49■■■□□ 2.79
USP42-205ENST00000465073 TTC21AQ8NDW8 1320 aa32.49■■■□□ 2.79
USP42-205ENST00000465073 TOM1L2Q6ZVM7 507 aa32.48■■■□□ 2.79
USP42-205ENST00000465073 ARHGEF25Q86VW2 580 aa32.47■■■□□ 2.79
USP42-205ENST00000465073 PARP4Q9UKK3 1724 aaKnown RBP32.46■■■□□ 2.79
USP42-205ENST00000465073 CPSF1Q10570 1443 aaKnown RBP32.46■■■□□ 2.79
USP42-205ENST00000465073 AXIN2Q9Y2T1 843 aa32.46■■■□□ 2.79
USP42-205ENST00000465073 WDR17Q8IZU2 1322 aa32.44■■■□□ 2.78
USP42-205ENST00000465073 KTN1Q86UP2 1357 aaKnown RBP32.43■■■□□ 2.78
USP42-205ENST00000465073 SBNO2Q9Y2G9 1366 aa32.43■■■□□ 2.78
USP42-205ENST00000465073 DDB1Q16531 1140 aa32.42■■■□□ 2.78
USP42-205ENST00000465073 COL18A1P39060 1754 aa32.42■■■□□ 2.78
USP42-205ENST00000465073 CARD11Q9BXL7 1154 aa32.42■■■□□ 2.78
USP42-205ENST00000465073 OVOS2A0A0G2JMS6 1433 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms