RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 ARMC2Q8NEN0 867 aa7.52□□□□□ -1.21
SCN3A-206ENST00000465043 DDRGK1Q96HY6 314 aa7.52□□□□□ -1.21
SCN3A-206ENST00000465043 CSPP1Q1MSJ5 1256 aa7.51□□□□□ -1.21
SCN3A-206ENST00000465043 CABLES1Q8TDN4 633 aa7.51□□□□□ -1.21
SCN3A-206ENST00000465043 BAP1Q92560 729 aa7.51□□□□□ -1.21
SCN3A-206ENST00000465043 ZNF775Q96BV0 537 aaPredicted RBP7.51□□□□□ -1.21
SCN3A-206ENST00000465043 LIMD1Q9UGP4 676 aa7.51□□□□□ -1.21
SCN3A-206ENST00000465043 WASF2Q9Y6W5 498 aa7.51□□□□□ -1.21
SCN3A-206ENST00000465043 SIAH2O43255 324 aa7.5□□□□□ -1.21
SCN3A-206ENST00000465043 SENP2Q9HC62 589 aa7.5□□□□□ -1.21
SCN3A-206ENST00000465043 F12P00748 615 aaPredicted RBP7.49□□□□□ -1.21
SCN3A-206ENST00000465043 FAM174AQ8TBP5 190 aa7.49□□□□□ -1.21
SCN3A-206ENST00000465043 HPS1Q92902 700 aa7.49□□□□□ -1.21
SCN3A-206ENST00000465043 C11orf95C9JLR9 678 aaPredicted RBP7.48□□□□□ -1.21
SCN3A-206ENST00000465043 SKIV2LQ15477 1246 aaKnown RBP7.48□□□□□ -1.21
SCN3A-206ENST00000465043 QPCTQ16769 361 aa7.48□□□□□ -1.21
SCN3A-206ENST00000465043 LINC01559Q495D7 138 aa7.48□□□□□ -1.21
SCN3A-206ENST00000465043 TSC1Q92574 1164 aa7.48□□□□□ -1.21
SCN3A-206ENST00000465043 KIFC2Q96AC6 838 aa7.48□□□□□ -1.21
SCN3A-206ENST00000465043 KDM4CQ9H3R0 1056 aa7.48□□□□□ -1.21
SCN3A-206ENST00000465043 POTECB2RU33 542 aa7.47□□□□□ -1.21
SCN3A-206ENST00000465043 SH3D19Q5HYK7 790 aa7.47□□□□□ -1.21
SCN3A-206ENST00000465043 NBPF14Q5TI25 921 aa7.47□□□□□ -1.21
SCN3A-206ENST00000465043 BPHLQ86WA6 291 aaPredicted RBP7.47□□□□□ -1.21
SCN3A-206ENST00000465043 ATP13A2Q9NQ11 1180 aa7.47□□□□□ -1.21
SCN3A-206ENST00000465043 POLR3EQ9NVU0 708 aa7.47□□□□□ -1.21
SCN3A-206ENST00000465043 GPKOWQ92917 476 aaPredicted RBP eCLIP7.46□□□□□ -1.22
SCN3A-206ENST00000465043 MAP10Q9P2G4 905 aa7.46□□□□□ -1.22
SCN3A-206ENST00000465043 GMPR2Q9P2T1 348 aaKnown RBP7.45□□□□□ -1.22
SCN3A-206ENST00000465043 DACH1Q9UI36 760 aa7.45□□□□□ -1.22
SCN3A-206ENST00000465043 PER1O15534 1290 aaPredicted RBP7.44□□□□□ -1.22
SCN3A-206ENST00000465043 AGERQ15109 404 aa7.44□□□□□ -1.22
SCN3A-206ENST00000465043 RTL5Q5HYW3 569 aaPredicted RBP7.44□□□□□ -1.22
SCN3A-206ENST00000465043 TRIM47Q96LD4 638 aa7.44□□□□□ -1.22
SCN3A-206ENST00000465043 CAPN5O15484 640 aaPredicted RBP7.43□□□□□ -1.22
SCN3A-206ENST00000465043 CDK15Q96Q40 435 aa7.43□□□□□ -1.22
SCN3A-206ENST00000465043 ADH1CP00326 375 aa7.42□□□□□ -1.22
SCN3A-206ENST00000465043 PPP2R2DQ66LE6 453 aa7.42□□□□□ -1.22
SCN3A-206ENST00000465043 PNMA1Q8ND90 353 aa7.42□□□□□ -1.22
SCN3A-206ENST00000465043 GPBP1L1Q9HC44 474 aaPredicted RBP7.42□□□□□ -1.22
SCN3A-206ENST00000465043 ATP1B4Q9UN42 357 aaPredicted RBP7.42□□□□□ -1.22
SCN3A-206ENST00000465043 TLL2Q9Y6L7 1015 aa7.42□□□□□ -1.22
SCN3A-206ENST00000465043 NR5A1Q13285 461 aa7.41□□□□□ -1.22
SCN3A-206ENST00000465043 NNTQ13423 1086 aa7.41□□□□□ -1.22
SCN3A-206ENST00000465043 FAM117AQ9C073 453 aa7.41□□□□□ -1.22
SCN3A-206ENST00000465043 GOPCQ9HD26 462 aa7.41□□□□□ -1.22
SCN3A-206ENST00000465043 TREML4Q6UXN2 200 aa7.4□□□□□ -1.22
SCN3A-206ENST00000465043 FOXJ1Q92949 421 aa7.4□□□□□ -1.22
SCN3A-206ENST00000465043 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.4□□□□□ -1.22
SCN3A-206ENST00000465043 ZC3H4Q9UPT8 1303 aaKnown RBP7.4□□□□□ -1.22
SCN3A-206ENST00000465043 MAP4K5Q9Y4K4 846 aa7.39□□□□□ -1.23
SCN3A-206ENST00000465043 CTDSPL2Q05D32 466 aa7.38□□□□□ -1.23
SCN3A-206ENST00000465043 ARID5BQ14865 1188 aa7.38□□□□□ -1.23
SCN3A-206ENST00000465043 SH3RF1Q7Z6J0 888 aa7.38□□□□□ -1.23
SCN3A-206ENST00000465043 TRMT44Q8IYL2 757 aaKnown RBP7.38□□□□□ -1.23
SCN3A-206ENST00000465043 C1QTNF2Q9BXJ5 285 aa7.38□□□□□ -1.23
SCN3A-206ENST00000465043 SCARF1Q14162 830 aa7.37□□□□□ -1.23
SCN3A-206ENST00000465043 PDXDC2PQ6P474 469 aa7.37□□□□□ -1.23
SCN3A-206ENST00000465043 SH3BP5LQ7L8J4 393 aa7.37□□□□□ -1.23
SCN3A-206ENST00000465043 SNRPBP14678 240 aaKnown RBP7.36□□□□□ -1.23
SCN3A-206ENST00000465043 WDR4P57081 412 aaKnown RBP7.36□□□□□ -1.23
SCN3A-206ENST00000465043 PROCA1Q8NCQ7 364 aaPredicted RBP7.36□□□□□ -1.23
SCN3A-206ENST00000465043 PCMTD1Q96MG8 357 aaPredicted RBP7.36□□□□□ -1.23
SCN3A-206ENST00000465043 FKBPLQ9UIM3 349 aa7.36□□□□□ -1.23
SCN3A-206ENST00000465043 CDV3Q9UKY7 258 aaKnown RBP7.36□□□□□ -1.23
SCN3A-206ENST00000465043 GPSM3Q9Y4H4 160 aa7.36□□□□□ -1.23
SCN3A-206ENST00000465043 WFS1O76024 890 aa7.35□□□□□ -1.23
SCN3A-206ENST00000465043 TIMP2P16035 220 aa7.35□□□□□ -1.23
SCN3A-206ENST00000465043 C4orf48Q5BLP8 95 aa7.35□□□□□ -1.23
SCN3A-206ENST00000465043 MAGEB6P1A0A0J9YX57 407 aa7.34□□□□□ -1.23
SCN3A-206ENST00000465043 AP1G2O75843 785 aa7.34□□□□□ -1.23
SCN3A-206ENST00000465043 UPP2O95045 317 aa7.34□□□□□ -1.23
SCN3A-206ENST00000465043 GRM5P41594 1212 aa7.34□□□□□ -1.23
SCN3A-206ENST00000465043 NEUROD2Q15784 382 aa7.34□□□□□ -1.23
SCN3A-206ENST00000465043 VASH1Q7L8A9 365 aaPredicted RBP7.34□□□□□ -1.23
SCN3A-206ENST00000465043 TRIM46Q7Z4K8 759 aa7.34□□□□□ -1.23
SCN3A-206ENST00000465043 ARHGAP9Q9BRR9 750 aa7.34□□□□□ -1.23
SCN3A-206ENST00000465043 KLF16Q9BXK1 252 aaPredicted RBP7.34□□□□□ -1.23
SCN3A-206ENST00000465043 BMP1P13497 986 aa7.33□□□□□ -1.24
SCN3A-206ENST00000465043 PTK2Q05397 1052 aa7.33□□□□□ -1.24
SCN3A-206ENST00000465043 TMEM259Q4ZIN3 620 aa7.33□□□□□ -1.24
SCN3A-206ENST00000465043 MRPL14Q6P1L8 145 aaKnown RBP7.33□□□□□ -1.24
SCN3A-206ENST00000465043 NPAS3Q8IXF0 933 aa7.33□□□□□ -1.24
SCN3A-206ENST00000465043 LRRN4Q8WUT4 740 aa7.33□□□□□ -1.24
SCN3A-206ENST00000465043 EMILIN1Q9Y6C2 1016 aa7.33□□□□□ -1.24
SCN3A-206ENST00000465043 TERTO14746 1132 aaKnown RBP7.32□□□□□ -1.24
SCN3A-206ENST00000465043 ZIC2O95409 532 aaPredicted RBP7.32□□□□□ -1.24
SCN3A-206ENST00000465043 ERFEQ4G0M1 354 aa7.32□□□□□ -1.24
SCN3A-206ENST00000465043 ZBTB33Q86T24 672 aa7.32□□□□□ -1.24
SCN3A-206ENST00000465043 SLC16A10Q8TF71 515 aa7.32□□□□□ -1.24
SCN3A-206ENST00000465043 TRIM52Q96A61 297 aa7.32□□□□□ -1.24
SCN3A-206ENST00000465043 SLC10A4Q96EP9 437 aa7.32□□□□□ -1.24
SCN3A-206ENST00000465043 CARD14Q9BXL6 1004 aa7.32□□□□□ -1.24
SCN3A-206ENST00000465043 USP17L8P0C7I0 530 aa7.31□□□□□ -1.24
SCN3A-206ENST00000465043 FSHRP23945 695 aa7.31□□□□□ -1.24
SCN3A-206ENST00000465043 RFC5P40937 340 aa7.31□□□□□ -1.24
SCN3A-206ENST00000465043 NFX1Q12986 1120 aaKnown RBP7.31□□□□□ -1.24
SCN3A-206ENST00000465043 NR6A1Q15406 480 aa7.31□□□□□ -1.24
SCN3A-206ENST00000465043 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
SCN3A-206ENST00000465043 ZFP42Q96MM3 310 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms