RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 MORC1Q86VD1 984 aa11.08□□□□□ -0.64
ACTB-208ENST00000464611 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
ACTB-208ENST00000464611 NOP58Q9Y2X3 529 aaKnown RBP11.08□□□□□ -0.64
ACTB-208ENST00000464611 KNDC1Q76NI1 1749 aa11.08□□□□□ -0.64
ACTB-208ENST00000464611 ADAMTS13Q76LX8 1427 aa11.08□□□□□ -0.64
ACTB-208ENST00000464611 NCKAP5LQ9HCH0 1330 aa11.08□□□□□ -0.64
ACTB-208ENST00000464611 PIK3R4Q99570 1358 aa11.07□□□□□ -0.64
ACTB-208ENST00000464611 WDR63Q8IWG1 891 aa11.07□□□□□ -0.64
ACTB-208ENST00000464611 CARD14Q9BXL6 1004 aa11.07□□□□□ -0.64
ACTB-208ENST00000464611 PNNQ9H307 717 aaKnown RBP11.07□□□□□ -0.64
ACTB-208ENST00000464611 ZBTB47Q9UFB7 747 aaPredicted RBP11.07□□□□□ -0.64
ACTB-208ENST00000464611 SALL2Q9Y467 1007 aaPredicted RBP11.07□□□□□ -0.64
ACTB-208ENST00000464611 CT47B1P0C2W7 299 aaPredicted RBP11.06□□□□□ -0.64
ACTB-208ENST00000464611 NUTM2DQ5VT03 806 aaPredicted RBP11.06□□□□□ -0.64
ACTB-208ENST00000464611 RUNDC1Q96C34 613 aa11.06□□□□□ -0.64
ACTB-208ENST00000464611 DDRGK1Q96HY6 314 aa11.06□□□□□ -0.64
ACTB-208ENST00000464611 XRN1Q8IZH2 1706 aaKnown RBP11.06□□□□□ -0.64
ACTB-208ENST00000464611 ANKRD36BQ8N2N9 1353 aa11.05□□□□□ -0.64
ACTB-208ENST00000464611 PLEKHH1Q9ULM0 1364 aa11.05□□□□□ -0.64
ACTB-208ENST00000464611 QRICH2Q9H0J4 1663 aa11.05□□□□□ -0.64
ACTB-208ENST00000464611 PDE4AP27815 886 aa11.05□□□□□ -0.64
ACTB-208ENST00000464611 BACH2Q9BYV9 841 aa11.05□□□□□ -0.64
ACTB-208ENST00000464611 APAF1O14727 1248 aa11.04□□□□□ -0.64
ACTB-208ENST00000464611 CRBNQ96SW2 442 aa11.04□□□□□ -0.64
ACTB-208ENST00000464611 TRAK1Q9UPV9 953 aa11.04□□□□□ -0.64
ACTB-208ENST00000464611 CPS1P31327 1500 aa11.04□□□□□ -0.64
ACTB-208ENST00000464611 ATAD2Q6PL18 1390 aa11.03□□□□□ -0.64
ACTB-208ENST00000464611 NSD3Q9BZ95 1437 aa11.03□□□□□ -0.64
ACTB-208ENST00000464611 CHD2O14647 1828 aaKnown RBP11.03□□□□□ -0.64
ACTB-208ENST00000464611 TERF2IPQ9NYB0 399 aa11.03□□□□□ -0.64
ACTB-208ENST00000464611 TBX22Q9Y458 520 aa11.03□□□□□ -0.64
ACTB-208ENST00000464611 PTCH1Q13635 1447 aa11.02□□□□□ -0.64
ACTB-208ENST00000464611 DLC1Q96QB1 1528 aa11.02□□□□□ -0.65
ACTB-208ENST00000464611 KDM2BQ8NHM5 1336 aa11.02□□□□□ -0.65
ACTB-208ENST00000464611 ARHGEF28Q8N1W1 1705 aaKnown RBP11.01□□□□□ -0.65
ACTB-208ENST00000464611 SLC26A8Q96RN1 970 aa11.01□□□□□ -0.65
ACTB-208ENST00000464611 MYH16Q9H6N6 1097 aa11.01□□□□□ -0.65
ACTB-208ENST00000464611 TECPR2O15040 1411 aa11.01□□□□□ -0.65
ACTB-208ENST00000464611 YTHDC2Q9H6S0 1430 aaKnown RBP11.01□□□□□ -0.65
ACTB-208ENST00000464611 WWC1Q8IX03 1113 aa11□□□□□ -0.65
ACTB-208ENST00000464611 SLC12A5Q9H2X9 1139 aa11□□□□□ -0.65
ACTB-208ENST00000464611 USP35Q9P2H5 1018 aa11□□□□□ -0.65
ACTB-208ENST00000464611 METP08581 1390 aa11□□□□□ -0.65
ACTB-208ENST00000464611 PPM1GO15355 546 aaPredicted RBP10.98□□□□□ -0.65
ACTB-208ENST00000464611 PLIN1O60240 522 aa10.98□□□□□ -0.65
ACTB-208ENST00000464611 PMFBP1Q8TBY8 1022 aa10.98□□□□□ -0.65
ACTB-208ENST00000464611 ABCC11Q96J66 1382 aa10.98□□□□□ -0.65
ACTB-208ENST00000464611 STRCP1A6NGW2 1772 aa10.98□□□□□ -0.65
ACTB-208ENST00000464611 KCNA6P17658 529 aa10.97□□□□□ -0.65
ACTB-208ENST00000464611 FAM161AQ3B820 660 aa10.97□□□□□ -0.65
ACTB-208ENST00000464611 TMEM132EQ6IEE7 984 aa10.97□□□□□ -0.65
ACTB-208ENST00000464611 HDGFL2Q7Z4V5 671 aaPredicted RBP10.97□□□□□ -0.65
ACTB-208ENST00000464611 SIRT1Q96EB6 747 aa10.97□□□□□ -0.65
ACTB-208ENST00000464611 IL16Q14005 1332 aa10.97□□□□□ -0.65
ACTB-208ENST00000464611 MAPK8IP3Q9UPT6 1336 aa10.97□□□□□ -0.65
ACTB-208ENST00000464611 FAM135BQ49AJ0 1406 aa10.97□□□□□ -0.65
ACTB-208ENST00000464611 PTPRUQ92729 1446 aa10.97□□□□□ -0.65
ACTB-208ENST00000464611 MTHFSP49914 203 aa10.96□□□□□ -0.65
ACTB-208ENST00000464611 CCDC146Q8IYE0 955 aa10.96□□□□□ -0.65
ACTB-208ENST00000464611 TCP11L2Q8N4U5 519 aa10.96□□□□□ -0.65
ACTB-208ENST00000464611 LTBP4Q8N2S1 1624 aa10.95□□□□□ -0.66
ACTB-208ENST00000464611 ADGRB2O60241 1585 aa10.95□□□□□ -0.66
ACTB-208ENST00000464611 ZNF428Q96B54 188 aa10.95□□□□□ -0.66
ACTB-208ENST00000464611 POGKQ9P215 609 aa10.95□□□□□ -0.66
ACTB-208ENST00000464611 CLEC11AQ9Y240 323 aa10.95□□□□□ -0.66
ACTB-208ENST00000464611 SHPRHQ149N8 1683 aa10.95□□□□□ -0.66
ACTB-208ENST00000464611 TULP4Q9NRJ4 1543 aa10.94□□□□□ -0.66
ACTB-208ENST00000464611 IQSEC2Q5JU85 1478 aa10.94□□□□□ -0.66
ACTB-208ENST00000464611 NCOA3Q9Y6Q9 1424 aa10.94□□□□□ -0.66
ACTB-208ENST00000464611 ZNF335Q9H4Z2 1342 aaPredicted RBP10.94□□□□□ -0.66
ACTB-208ENST00000464611 SENP3-EIF4A1A0A087X0R7 540 aa10.94□□□□□ -0.66
ACTB-208ENST00000464611 CANXP27824 592 aaKnown RBP10.94□□□□□ -0.66
ACTB-208ENST00000464611 RTL5Q5HYW3 569 aaPredicted RBP10.94□□□□□ -0.66
ACTB-208ENST00000464611 AMOTL2Q9Y2J4 779 aa10.94□□□□□ -0.66
ACTB-208ENST00000464611 NALCNQ8IZF0 1738 aa10.94□□□□□ -0.66
ACTB-208ENST00000464611 CDC42BPGQ6DT37 1551 aa10.94□□□□□ -0.66
ACTB-208ENST00000464611 NEFMP07197 916 aa10.93□□□□□ -0.66
ACTB-208ENST00000464611 SRPK2P78362 688 aaKnown RBP10.93□□□□□ -0.66
ACTB-208ENST00000464611 CLUAP1Q96AJ1 413 aa10.93□□□□□ -0.66
ACTB-208ENST00000464611 CHMP4BQ9H444 224 aaKnown RBP10.93□□□□□ -0.66
ACTB-208ENST00000464611 DAXXQ9UER7 740 aaPredicted RBP10.93□□□□□ -0.66
ACTB-208ENST00000464611 LRRC7Q96NW7 1537 aa10.93□□□□□ -0.66
ACTB-208ENST00000464611 ADGRL3Q9HAR2 1447 aa10.92□□□□□ -0.66
ACTB-208ENST00000464611 ROBO2Q9HCK4 1378 aa10.92□□□□□ -0.66
ACTB-208ENST00000464611 RARSP54136 660 aaKnown RBP10.92□□□□□ -0.66
ACTB-208ENST00000464611 CALD1Q05682 793 aaKnown RBP10.92□□□□□ -0.66
ACTB-208ENST00000464611 C20orf194Q5TEA3 1177 aa10.92□□□□□ -0.66
ACTB-208ENST00000464611 ANKRD26Q9UPS8 1709 aa10.92□□□□□ -0.66
ACTB-208ENST00000464611 DCCP43146 1447 aa10.92□□□□□ -0.66
ACTB-208ENST00000464611 XIRP1Q702N8 1843 aaKnown RBP10.91□□□□□ -0.66
ACTB-208ENST00000464611 SPDYE2BA6NHP3 402 aa10.91□□□□□ -0.66
ACTB-208ENST00000464611 SPDYE6P0CI01 402 aa10.91□□□□□ -0.66
ACTB-208ENST00000464611 U2AF1L5P0DN76 240 aaPredicted RBP10.91□□□□□ -0.66
ACTB-208ENST00000464611 U2AF1Q01081 240 aaKnown RBP eCLIP10.91□□□□□ -0.66
ACTB-208ENST00000464611 SPDYE2Q495Y8 402 aa10.91□□□□□ -0.66
ACTB-208ENST00000464611 SPDYE1Q8NFV5 336 aaPredicted RBP10.91□□□□□ -0.66
ACTB-208ENST00000464611 RWDD1Q9H446 243 aaPredicted RBP10.91□□□□□ -0.66
ACTB-208ENST00000464611 STK26Q9P289 416 aa10.91□□□□□ -0.66
ACTB-208ENST00000464611 PNPLA6Q8IY17 1366 aa10.9□□□□□ -0.66
ACTB-208ENST00000464611 ATP7BP35670 1465 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms