RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 RGPD3A6NKT7 1758 aaPredicted RBP20.82■□□□□ 0.92
C9orf3-211ENST00000463372 RGPD4Q7Z3J3 1758 aa20.82■□□□□ 0.92
C9orf3-211ENST00000463372 SPATA31A1Q5TZJ5 1347 aa20.82■□□□□ 0.92
C9orf3-211ENST00000463372 CAPN15O75808 1086 aa20.81■□□□□ 0.92
C9orf3-211ENST00000463372 PHF8Q9UPP1 1060 aa20.81■□□□□ 0.92
C9orf3-211ENST00000463372 ANO8Q9HCE9 1232 aaPredicted RBP20.8■□□□□ 0.92
C9orf3-211ENST00000463372 VPS8Q8N3P4 1428 aa20.79■□□□□ 0.92
C9orf3-211ENST00000463372 NUP155O75694 1391 aa20.79■□□□□ 0.92
C9orf3-211ENST00000463372 GOLGB1Q14789 3259 aaKnown RBP20.78■□□□□ 0.92
C9orf3-211ENST00000463372 WAPLQ7Z5K2 1190 aa20.77■□□□□ 0.92
C9orf3-211ENST00000463372 BCL11BQ9C0K0 894 aaPredicted RBP20.77■□□□□ 0.92
C9orf3-211ENST00000463372 CLTCL1P53675 1640 aa20.76■□□□□ 0.91
C9orf3-211ENST00000463372 PRDM11Q9NQV5 511 aa20.75■□□□□ 0.91
C9orf3-211ENST00000463372 IFT172Q9UG01 1749 aa20.75■□□□□ 0.91
C9orf3-211ENST00000463372 MTFR1LQ9H019 292 aa20.74■□□□□ 0.91
C9orf3-211ENST00000463372 STRN4Q9NRL3 753 aa20.74■□□□□ 0.91
C9orf3-211ENST00000463372 USP35Q9P2H5 1018 aa20.74■□□□□ 0.91
C9orf3-211ENST00000463372 NRXN1Q9ULB1 1477 aa20.74■□□□□ 0.91
C9orf3-211ENST00000463372 C11orf95C9JLR9 678 aaPredicted RBP20.73■□□□□ 0.91
C9orf3-211ENST00000463372 PLSCR1O15162 318 aa20.73■□□□□ 0.91
C9orf3-211ENST00000463372 PELP1Q8IZL8 1130 aaKnown RBP20.72■□□□□ 0.91
C9orf3-211ENST00000463372 ARXQ96QS3 562 aa20.72■□□□□ 0.91
C9orf3-211ENST00000463372 STK26Q9P289 416 aa20.72■□□□□ 0.91
C9orf3-211ENST00000463372 MAP3K5Q99683 1374 aa20.72■□□□□ 0.91
C9orf3-211ENST00000463372 SLC34A2O95436 690 aa20.71■□□□□ 0.91
C9orf3-211ENST00000463372 BARGINQ6ZT62 677 aa20.71■□□□□ 0.91
C9orf3-211ENST00000463372 TECPR2O15040 1411 aa20.7■□□□□ 0.9
C9orf3-211ENST00000463372 SBF2Q86WG5 1849 aa20.7■□□□□ 0.9
C9orf3-211ENST00000463372 FAM50AQ14320 339 aaKnown RBP20.7■□□□□ 0.9
C9orf3-211ENST00000463372 STK32BQ9NY57 414 aa20.7■□□□□ 0.9
C9orf3-211ENST00000463372 SGIP1Q9BQI5 828 aa20.69■□□□□ 0.9
C9orf3-211ENST00000463372 ALS2Q96Q42 1657 aa20.68■□□□□ 0.9
C9orf3-211ENST00000463372 TRPM3Q9HCF6 1732 aaPredicted RBP20.67■□□□□ 0.9
C9orf3-211ENST00000463372 PRELPP51888 382 aa20.67■□□□□ 0.9
C9orf3-211ENST00000463372 GPBP1L1Q9HC44 474 aaPredicted RBP20.67■□□□□ 0.9
C9orf3-211ENST00000463372 PPLO60437 1756 aa20.67■□□□□ 0.9
C9orf3-211ENST00000463372 PLEKHH1Q9ULM0 1364 aa20.66■□□□□ 0.9
C9orf3-211ENST00000463372 KNDC1Q76NI1 1749 aa20.66■□□□□ 0.9
C9orf3-211ENST00000463372 CRYBG1Q9Y4K1 1723 aa20.66■□□□□ 0.9
C9orf3-211ENST00000463372 RPGRIP1LQ68CZ1 1315 aa20.64■□□□□ 0.89
C9orf3-211ENST00000463372 EVA1CP58658 441 aa20.64■□□□□ 0.89
C9orf3-211ENST00000463372 ATP10DQ9P241 1426 aa20.63■□□□□ 0.89
C9orf3-211ENST00000463372 SLC15A2Q16348 729 aa20.63■□□□□ 0.89
C9orf3-211ENST00000463372 COL13A1Q5TAT6 717 aaPredicted RBP20.63■□□□□ 0.89
C9orf3-211ENST00000463372 PMFBP1Q8TBY8 1022 aa20.63■□□□□ 0.89
C9orf3-211ENST00000463372 APLP2Q06481 763 aa20.62■□□□□ 0.89
C9orf3-211ENST00000463372 CHRNA2Q15822 529 aa20.62■□□□□ 0.89
C9orf3-211ENST00000463372 KLHL34Q8N239 644 aa20.62■□□□□ 0.89
C9orf3-211ENST00000463372 OVOS2A0A0G2JMS6 1433 aa20.61■□□□□ 0.89
C9orf3-211ENST00000463372 OVOS2A0A0J9YW53 1432 aa20.61■□□□□ 0.89
C9orf3-211ENST00000463372 OVOS2Q6IE36 1432 aa20.61■□□□□ 0.89
C9orf3-211ENST00000463372 PARP4Q9UKK3 1724 aaKnown RBP20.61■□□□□ 0.89
C9orf3-211ENST00000463372 TNS4Q8IZW8 715 aa20.61■□□□□ 0.89
C9orf3-211ENST00000463372 TCP11L2Q8N4U5 519 aa20.61■□□□□ 0.89
C9orf3-211ENST00000463372 GPRASP1Q5JY77 1395 aa20.6■□□□□ 0.89
C9orf3-211ENST00000463372 KIAA0232Q92628 1395 aa20.6■□□□□ 0.89
C9orf3-211ENST00000463372 PROM2Q8N271 834 aa20.6■□□□□ 0.89
C9orf3-211ENST00000463372 ABCC11Q96J66 1382 aa20.59■□□□□ 0.89
C9orf3-211ENST00000463372 PEAK1Q9H792 1746 aa20.59■□□□□ 0.89
C9orf3-211ENST00000463372 GRIN3BO60391 1043 aa20.58■□□□□ 0.89
C9orf3-211ENST00000463372 APLP1P51693 650 aa20.58■□□□□ 0.89
C9orf3-211ENST00000463372 SSH2Q76I76 1423 aa20.58■□□□□ 0.88
C9orf3-211ENST00000463372 THRAP3Q9Y2W1 955 aaKnown RBP20.55■□□□□ 0.88
C9orf3-211ENST00000463372 PAK3O75914 559 aaPredicted RBP20.54■□□□□ 0.88
C9orf3-211ENST00000463372 TXNRD1Q16881 649 aa20.54■□□□□ 0.88
C9orf3-211ENST00000463372 PCDH10Q9P2E7 1040 aa20.54■□□□□ 0.88
C9orf3-211ENST00000463372 ROCK1Q13464 1354 aa20.54■□□□□ 0.88
C9orf3-211ENST00000463372 LARP1Q6PKG0 1096 aaKnown RBP20.53■□□□□ 0.88
C9orf3-211ENST00000463372 ZNF526Q8TF50 670 aaPredicted RBP20.53■□□□□ 0.88
C9orf3-211ENST00000463372 DHX57Q6P158 1386 aaKnown RBP20.52■□□□□ 0.88
C9orf3-211ENST00000463372 ZC3H6P61129 1189 aaKnown RBP20.52■□□□□ 0.88
C9orf3-211ENST00000463372 TMEM132EQ6IEE7 984 aa20.52■□□□□ 0.88
C9orf3-211ENST00000463372 PTF1AQ7RTS3 328 aa20.51■□□□□ 0.87
C9orf3-211ENST00000463372 DNAJC5GQ8N7S2 189 aa20.51■□□□□ 0.87
C9orf3-211ENST00000463372 PHRF1Q9P1Y6 1649 aaKnown RBP20.51■□□□□ 0.87
C9orf3-211ENST00000463372 ANKARQ7Z5J8 1434 aa20.51■□□□□ 0.87
C9orf3-211ENST00000463372 ACIN1Q9UKV3 1341 aaKnown RBP20.5■□□□□ 0.87
C9orf3-211ENST00000463372 POLD1P28340 1107 aa20.49■□□□□ 0.87
C9orf3-211ENST00000463372 ATP7BP35670 1465 aa20.49■□□□□ 0.87
C9orf3-211ENST00000463372 YTHDC2Q9H6S0 1430 aaKnown RBP20.48■□□□□ 0.87
C9orf3-211ENST00000463372 SIRT1Q96EB6 747 aa20.48■□□□□ 0.87
C9orf3-211ENST00000463372 TOPAZ1Q8N9V7 1692 aa20.48■□□□□ 0.87
C9orf3-211ENST00000463372 AKAP12Q02952 1782 aa20.47■□□□□ 0.87
C9orf3-211ENST00000463372 YBX3P16989 372 aaKnown RBP eCLIP20.47■□□□□ 0.873e-7■■□□□ 11.8
C9orf3-211ENST00000463372 ADGRF5Q8IZF2 1346 aa20.47■□□□□ 0.87
C9orf3-211ENST00000463372 LRRC37A3O60309 1634 aa20.45■□□□□ 0.87
C9orf3-211ENST00000463372 DDB1Q16531 1140 aa20.45■□□□□ 0.86
C9orf3-211ENST00000463372 NLGN2Q8NFZ4 835 aa20.45■□□□□ 0.86
C9orf3-211ENST00000463372 SAFB2Q14151 953 aaKnown RBP eCLIP20.44■□□□□ 0.86
C9orf3-211ENST00000463372 NGDNQ8NEJ9 315 aaKnown RBP20.43■□□□□ 0.86
C9orf3-211ENST00000463372 ADCY9O60503 1353 aa20.41■□□□□ 0.86
C9orf3-211ENST00000463372 AATKQ6ZMQ8 1374 aa20.41■□□□□ 0.86
C9orf3-211ENST00000463372 LMO7Q8WWI1 1683 aa20.4■□□□□ 0.86
C9orf3-211ENST00000463372 WDR90Q96KV7 1748 aa20.4■□□□□ 0.86
C9orf3-211ENST00000463372 PCNTO95613 3336 aa20.4■□□□□ 0.86
C9orf3-211ENST00000463372 SLC16A10Q8TF71 515 aa20.39■□□□□ 0.85
C9orf3-211ENST00000463372 COL24A1Q17RW2 1714 aa20.39■□□□□ 0.85
C9orf3-211ENST00000463372 KIF3CO14782 793 aa20.38■□□□□ 0.85
C9orf3-211ENST00000463372 BCL9O00512 1426 aa20.37■□□□□ 0.85
C9orf3-211ENST00000463372 CRB1P82279 1406 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms