RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 A0A0G2JS52 829 aa30.51■■■□□ 2.47
CPSF7-209ENST00000463244 MYT1Q01538 1121 aa30.51■■■□□ 2.47
CPSF7-209ENST00000463244 DCAF11Q8TEB1 546 aa30.51■■■□□ 2.47
CPSF7-209ENST00000463244 NGDNQ8NEJ9 315 aaKnown RBP30.48■■■□□ 2.47
CPSF7-209ENST00000463244 STAC3Q96MF2 364 aa30.48■■■□□ 2.47
CPSF7-209ENST00000463244 ARHGEF28Q8N1W1 1705 aaKnown RBP30.47■■■□□ 2.47
CPSF7-209ENST00000463244 ITSN1Q15811 1721 aa30.47■■■□□ 2.47
CPSF7-209ENST00000463244 SPATA31A5Q5VU36 1347 aa30.46■■■□□ 2.47
CPSF7-209ENST00000463244 SPATA31A7Q8IWB4 1347 aa30.46■■■□□ 2.47
CPSF7-209ENST00000463244 LRP5O75197 1615 aa30.45■■■□□ 2.47
CPSF7-209ENST00000463244 BAG6P46379 1132 aa30.45■■■□□ 2.47
CPSF7-209ENST00000463244 ATP7BP35670 1465 aa30.44■■■□□ 2.46
CPSF7-209ENST00000463244 THSD7AQ9UPZ6 1657 aa30.43■■■□□ 2.46
CPSF7-209ENST00000463244 PAK3O75914 559 aaPredicted RBP30.43■■■□□ 2.46
CPSF7-209ENST00000463244 RGPD1P0DJD0 1748 aa30.42■■■□□ 2.46
CPSF7-209ENST00000463244 PRDM11Q9NQV5 511 aa30.41■■■□□ 2.46
CPSF7-209ENST00000463244 NUDT16Q96DE0 195 aaKnown RBP30.39■■■□□ 2.46
CPSF7-209ENST00000463244 PHRF1Q9P1Y6 1649 aaKnown RBP30.37■■■□□ 2.45
CPSF7-209ENST00000463244 FAM182BQ5T319 152 aa30.37■■■□□ 2.45
CPSF7-209ENST00000463244 KIAA0232Q92628 1395 aa30.36■■■□□ 2.45
CPSF7-209ENST00000463244 PSDA5PKW4 1024 aaPredicted RBP30.35■■■□□ 2.45
CPSF7-209ENST00000463244 EN1Q05925 392 aaPredicted RBP30.35■■■□□ 2.45
CPSF7-209ENST00000463244 TNS1Q9HBL0 1735 aaKnown RBP30.34■■■□□ 2.45
CPSF7-209ENST00000463244 TOPAZ1Q8N9V7 1692 aa30.33■■■□□ 2.45
CPSF7-209ENST00000463244 DISP2A7MBM2 1401 aa30.33■■■□□ 2.45
CPSF7-209ENST00000463244 SPATA31A1Q5TZJ5 1347 aa30.33■■■□□ 2.45
CPSF7-209ENST00000463244 HRCP23327 699 aa30.33■■■□□ 2.45
CPSF7-209ENST00000463244 POLR3AO14802 1390 aaPredicted RBP30.31■■■□□ 2.44
CPSF7-209ENST00000463244 CHRNA2Q15822 529 aa30.31■■■□□ 2.44
CPSF7-209ENST00000463244 CDK19Q9BWU1 502 aa30.31■■■□□ 2.44
CPSF7-209ENST00000463244 KIAA1210Q9ULL0 1709 aa30.28■■■□□ 2.44
CPSF7-209ENST00000463244 ACEP12821 1306 aa30.27■■■□□ 2.44
CPSF7-209ENST00000463244 ZC3H6P61129 1189 aaKnown RBP30.27■■■□□ 2.44
CPSF7-209ENST00000463244 NUTM2GQ5VZR2 741 aa30.27■■■□□ 2.44
CPSF7-209ENST00000463244 STRN4Q9NRL3 753 aa30.27■■■□□ 2.44
CPSF7-209ENST00000463244 CCDC61Q9Y6R9 512 aa30.26■■■□□ 2.43
CPSF7-209ENST00000463244 NBPF8Q3BBV2 869 aa30.25■■■□□ 2.43
CPSF7-209ENST00000463244 PLEKHG3A1L390 1219 aa30.24■■■□□ 2.43
CPSF7-209ENST00000463244 NRKQ7Z2Y5 1582 aa30.24■■■□□ 2.43
CPSF7-209ENST00000463244 FAM196AQ6ZSG2 479 aa30.23■■■□□ 2.43
CPSF7-209ENST00000463244 SSH2Q76I76 1423 aa30.22■■■□□ 2.43
CPSF7-209ENST00000463244 R3HDM1Q15032 1099 aaKnown RBP30.21■■■□□ 2.43
CPSF7-209ENST00000463244 EZH2Q15910 746 aaKnown RBP30.21■■■□□ 2.43
CPSF7-209ENST00000463244 TRIM37O94972 964 aa30.2■■■□□ 2.43
CPSF7-209ENST00000463244 BARGINQ6ZT62 677 aa30.19■■■□□ 2.42
CPSF7-209ENST00000463244 CAMKK2Q96RR4 588 aa30.19■■■□□ 2.42
CPSF7-209ENST00000463244 USP35Q9P2H5 1018 aa30.19■■■□□ 2.42
CPSF7-209ENST00000463244 LMO7Q8WWI1 1683 aa30.19■■■□□ 2.42
CPSF7-209ENST00000463244 CAMTA1Q9Y6Y1 1673 aa30.19■■■□□ 2.42
CPSF7-209ENST00000463244 CPDO75976 1380 aa30.18■■■□□ 2.42
CPSF7-209ENST00000463244 ABTB2Q8N961 1025 aa30.18■■■□□ 2.42
CPSF7-209ENST00000463244 USP19O94966 1318 aa30.18■■■□□ 2.42
CPSF7-209ENST00000463244 EVA1CP58658 441 aa30.17■■■□□ 2.42
CPSF7-209ENST00000463244 NBPF1Q3BBV0 1214 aa30.16■■■□□ 2.42
CPSF7-209ENST00000463244 PARD3Q8TEW0 1356 aa30.15■■■□□ 2.42
CPSF7-209ENST00000463244 LARP1Q6PKG0 1096 aaKnown RBP30.14■■■□□ 2.42
CPSF7-209ENST00000463244 PDE3BQ13370 1112 aa30.13■■■□□ 2.41
CPSF7-209ENST00000463244 PPIP5K1Q6PFW1 1433 aa30.13■■■□□ 2.41
CPSF7-209ENST00000463244 RREB1Q92766 1687 aa30.12■■■□□ 2.41
CPSF7-209ENST00000463244 APBA3O96018 575 aa30.12■■■□□ 2.41
CPSF7-209ENST00000463244 TCP11L2Q8N4U5 519 aa30.12■■■□□ 2.41
CPSF7-209ENST00000463244 SRPK2P78362 688 aaKnown RBP30.1■■■□□ 2.41
CPSF7-209ENST00000463244 NLRP13Q86W25 1043 aa30.1■■■□□ 2.41
CPSF7-209ENST00000463244 GCP02774 474 aa30.09■■■□□ 2.41
CPSF7-209ENST00000463244 CENPJQ9HC77 1338 aaPredicted RBP30.09■■■□□ 2.41
CPSF7-209ENST00000463244 THRAP3Q9Y2W1 955 aaKnown RBP30.08■■■□□ 2.41
CPSF7-209ENST00000463244 PARP4Q9UKK3 1724 aaKnown RBP30.08■■■□□ 2.41
CPSF7-209ENST00000463244 COL5A2P05997 1499 aaPredicted RBP30.07■■■□□ 2.4
CPSF7-209ENST00000463244 BRD4O60885 1362 aaPredicted RBP30.07■■■□□ 2.4
CPSF7-209ENST00000463244 CABP2Q9NPB3 220 aa30.07■■■□□ 2.4
CPSF7-209ENST00000463244 NUP188Q5SRE5 1749 aa30.07■■■□□ 2.4
CPSF7-209ENST00000463244 QRICH2Q9H0J4 1663 aa30.06■■■□□ 2.4
CPSF7-209ENST00000463244 USP6P35125 1406 aa30.01■■■□□ 2.39
CPSF7-209ENST00000463244 CRB1P82279 1406 aa30■■■□□ 2.39
CPSF7-209ENST00000463244 CABP1Q9NZU7 370 aa29.99■■■□□ 2.39
CPSF7-209ENST00000463244 SLIT3O75094 1523 aa29.99■■■□□ 2.39
CPSF7-209ENST00000463244 AATKQ6ZMQ8 1374 aa29.97■■■□□ 2.39
CPSF7-209ENST00000463244 PEAK1Q9H792 1746 aa29.96■■■□□ 2.39
CPSF7-209ENST00000463244 C11orf95C9JLR9 678 aaPredicted RBP29.96■■■□□ 2.39
CPSF7-209ENST00000463244 NLRP6P59044 892 aa29.96■■■□□ 2.39
CPSF7-209ENST00000463244 NBPF14Q5TI25 921 aa29.96■■■□□ 2.39
CPSF7-209ENST00000463244 PIK3C2AO00443 1686 aa29.95■■■□□ 2.39
CPSF7-209ENST00000463244 LRRC37A3O60309 1634 aa29.94■■■□□ 2.38
CPSF7-209ENST00000463244 COL18A1P39060 1754 aa29.94■■■□□ 2.38
CPSF7-209ENST00000463244 OVOS2A0A0G2JMS6 1433 aa29.94■■■□□ 2.38
CPSF7-209ENST00000463244 OVOS2A0A0J9YW53 1432 aa29.94■■■□□ 2.38
CPSF7-209ENST00000463244 OVOS2Q6IE36 1432 aa29.94■■■□□ 2.38
CPSF7-209ENST00000463244 ZBTB7CA1YPR0 619 aa29.93■■■□□ 2.38
CPSF7-209ENST00000463244 SBF2Q86WG5 1849 aa29.93■■■□□ 2.38
CPSF7-209ENST00000463244 RGPD3A6NKT7 1758 aaPredicted RBP29.92■■■□□ 2.38
CPSF7-209ENST00000463244 RGPD4Q7Z3J3 1758 aa29.92■■■□□ 2.38
CPSF7-209ENST00000463244 WNK3Q9BYP7 1800 aa29.89■■■□□ 2.38
CPSF7-209ENST00000463244 DDB1Q16531 1140 aa29.88■■■□□ 2.37
CPSF7-209ENST00000463244 TOM1L2Q6ZVM7 507 aa29.88■■■□□ 2.37
CPSF7-209ENST00000463244 L3MBTL2Q969R5 705 aa29.88■■■□□ 2.37
CPSF7-209ENST00000463244 EVC2Q86UK5 1308 aa29.88■■■□□ 2.37
CPSF7-209ENST00000463244 TRPM1Q7Z4N2 1603 aa29.88■■■□□ 2.37
CPSF7-209ENST00000463244 AXIN2Q9Y2T1 843 aa29.86■■■□□ 2.37
CPSF7-209ENST00000463244 WDR17Q8IZU2 1322 aa29.86■■■□□ 2.37
CPSF7-209ENST00000463244 AKAP12Q02952 1782 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms