RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ARID4AP29374 1257 aaPredicted RBP9.39□□□□□ -0.91
COPS3-205ENST00000463097 DMRTA1Q5VZB9 504 aa9.39□□□□□ -0.91
COPS3-205ENST00000463097 VPS9D1Q9Y2B5 631 aa9.39□□□□□ -0.91
COPS3-205ENST00000463097 SSFA2P28290 1259 aa9.38□□□□□ -0.91
COPS3-205ENST00000463097 DEPDC4Q8N2C3 294 aa9.38□□□□□ -0.91
COPS3-205ENST00000463097 FAM174AQ8TBP5 190 aa9.38□□□□□ -0.91
COPS3-205ENST00000463097 USB1Q9BQ65 265 aaKnown RBP9.38□□□□□ -0.91
COPS3-205ENST00000463097 MKRN1Q9UHC7 482 aaKnown RBP9.38□□□□□ -0.91
COPS3-205ENST00000463097 USP17L15C9J2P7 530 aa9.37□□□□□ -0.91
COPS3-205ENST00000463097 USP17L10C9JJH3 530 aa9.37□□□□□ -0.91
COPS3-205ENST00000463097 USP17L13C9JLJ4 530 aa9.37□□□□□ -0.91
COPS3-205ENST00000463097 USP17L12C9JPN9 530 aa9.37□□□□□ -0.91
COPS3-205ENST00000463097 USP17L11C9JVI0 530 aa9.37□□□□□ -0.91
COPS3-205ENST00000463097 USP17L21D6R901 530 aa9.37□□□□□ -0.91
COPS3-205ENST00000463097 USP17L18D6R9N7 530 aa9.37□□□□□ -0.91
COPS3-205ENST00000463097 USP17L22D6RA61 530 aa9.37□□□□□ -0.91
COPS3-205ENST00000463097 USP17L17D6RBQ6 530 aa9.37□□□□□ -0.91
COPS3-205ENST00000463097 USP17L19D6RCP7 530 aa9.37□□□□□ -0.91
COPS3-205ENST00000463097 USP17L20D6RJB6 530 aa9.37□□□□□ -0.91
COPS3-205ENST00000463097 F12P00748 615 aaPredicted RBP9.37□□□□□ -0.91
COPS3-205ENST00000463097 USP17L24Q0WX57 530 aa9.37□□□□□ -0.91
COPS3-205ENST00000463097 CRTC2Q53ET0 693 aaPredicted RBP9.37□□□□□ -0.91
COPS3-205ENST00000463097 LARP1Q6PKG0 1096 aaKnown RBP9.37□□□□□ -0.91
COPS3-205ENST00000463097 POTEEQ6S8J3 1075 aa9.37□□□□□ -0.91
COPS3-205ENST00000463097 RNF19BQ6ZMZ0 732 aa9.37□□□□□ -0.91
COPS3-205ENST00000463097 SP7Q8TDD2 431 aaPredicted RBP9.37□□□□□ -0.91
COPS3-205ENST00000463097 RBM47A0AV96 593 aaKnown RBP9.36□□□□□ -0.91
COPS3-205ENST00000463097 PTK7Q13308 1070 aa9.36□□□□□ -0.91
COPS3-205ENST00000463097 BRICD5Q6PL45 260 aa9.36□□□□□ -0.91
COPS3-205ENST00000463097 BLOC1S3Q6QNY0 202 aa9.36□□□□□ -0.91
COPS3-205ENST00000463097 FAM200AQ8TCP9 573 aa9.36□□□□□ -0.91
COPS3-205ENST00000463097 ZFRQ96KR1 1074 aaKnown RBP9.36□□□□□ -0.91
COPS3-205ENST00000463097 NBPF3Q9H094 633 aa9.36□□□□□ -0.91
COPS3-205ENST00000463097 SALL2Q9Y467 1007 aaPredicted RBP9.36□□□□□ -0.91
COPS3-205ENST00000463097 UNCXA6NJT0 531 aa9.35□□□□□ -0.91
COPS3-205ENST00000463097 RASA1P20936 1047 aa9.35□□□□□ -0.91
COPS3-205ENST00000463097 CDCA7Q9BWT1 371 aaPredicted RBP9.35□□□□□ -0.91
COPS3-205ENST00000463097 SLAIN2Q9P270 581 aa9.35□□□□□ -0.91
COPS3-205ENST00000463097 MAP10Q9P2G4 905 aa9.35□□□□□ -0.91
COPS3-205ENST00000463097 CEP126Q9P2H0 1117 aa9.35□□□□□ -0.91
COPS3-205ENST00000463097 AXIN2Q9Y2T1 843 aa9.35□□□□□ -0.91
COPS3-205ENST00000463097 ATP5J2-PTCD1G3V325 749 aa9.34□□□□□ -0.91
COPS3-205ENST00000463097 ERCC3P19447 782 aa9.34□□□□□ -0.91
COPS3-205ENST00000463097 FAM69CQ0P6D2 419 aa9.34□□□□□ -0.91
COPS3-205ENST00000463097 SLFNL1Q499Z3 407 aa9.34□□□□□ -0.91
COPS3-205ENST00000463097 ZNF592Q92610 1267 aa9.34□□□□□ -0.91
COPS3-205ENST00000463097 CLP1Q92989 425 aaKnown RBP9.34□□□□□ -0.91
COPS3-205ENST00000463097 PRR14Q9BWN1 585 aa9.34□□□□□ -0.91
COPS3-205ENST00000463097 LZTS3O60299 673 aaPredicted RBP9.33□□□□□ -0.92
COPS3-205ENST00000463097 MCCD1P59942 119 aaPredicted RBP9.33□□□□□ -0.92
COPS3-205ENST00000463097 NCOA4Q13772 614 aa9.33□□□□□ -0.92
COPS3-205ENST00000463097 PTPRNQ16849 979 aa9.33□□□□□ -0.92
COPS3-205ENST00000463097 GPSM3Q9Y4H4 160 aa9.33□□□□□ -0.92
COPS3-205ENST00000463097 BHMG1C9JSJ3 638 aaPredicted RBP9.32□□□□□ -0.92
COPS3-205ENST00000463097 JUNDP17535 347 aa9.32□□□□□ -0.92
COPS3-205ENST00000463097 CTHP32929 405 aa9.32□□□□□ -0.92
COPS3-205ENST00000463097 PBX2P40425 430 aa9.32□□□□□ -0.92
COPS3-205ENST00000463097 PTK2Q05397 1052 aa9.32□□□□□ -0.92
COPS3-205ENST00000463097 DNAJC14Q6Y2X3 702 aaPredicted RBP9.32□□□□□ -0.92
COPS3-205ENST00000463097 ANKMY2Q8IV38 441 aa9.32□□□□□ -0.92
COPS3-205ENST00000463097 PHTF2Q8N3S3 785 aa9.32□□□□□ -0.92
COPS3-205ENST00000463097 SHROOM4Q9ULL8 1493 aa9.32□□□□□ -0.92
COPS3-205ENST00000463097 ERBB3P21860 1342 aa9.31□□□□□ -0.92
COPS3-205ENST00000463097 SOWAHDA6NJG2 315 aa9.31□□□□□ -0.92
COPS3-205ENST00000463097 VARS2Q5ST30 1063 aaKnown RBP9.31□□□□□ -0.92
COPS3-205ENST00000463097 PDXDC2PQ6P474 469 aa9.31□□□□□ -0.92
COPS3-205ENST00000463097 RNF135Q8IUD6 432 aa9.31□□□□□ -0.92
COPS3-205ENST00000463097 PLPP7Q8NBV4 271 aa9.31□□□□□ -0.92
COPS3-205ENST00000463097 LRCH3Q96II8 777 aa9.31□□□□□ -0.92
COPS3-205ENST00000463097 FMNL1O95466 1100 aaPredicted RBP9.3□□□□□ -0.92
COPS3-205ENST00000463097 SCUBE3Q8IX30 993 aa9.3□□□□□ -0.92
COPS3-205ENST00000463097 THAP11Q96EK4 314 aa9.3□□□□□ -0.92
COPS3-205ENST00000463097 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.3□□□□□ -0.92
COPS3-205ENST00000463097 ATP2B4P23634 1241 aa9.29□□□□□ -0.92
COPS3-205ENST00000463097 ARMC2Q8NEN0 867 aa9.29□□□□□ -0.92
COPS3-205ENST00000463097 GPKOWQ92917 476 aaPredicted RBP eCLIP9.29□□□□□ -0.92
COPS3-205ENST00000463097 PCDHB9Q9Y5E1 797 aa9.29□□□□□ -0.92
COPS3-205ENST00000463097 SERPINB4P48594 390 aa9.28□□□□□ -0.92
COPS3-205ENST00000463097 MAP7D1Q3KQU3 841 aa9.28□□□□□ -0.92
COPS3-205ENST00000463097 POTEHQ6S545 545 aa9.28□□□□□ -0.92
COPS3-205ENST00000463097 OGFOD1Q8N543 542 aa9.28□□□□□ -0.92
COPS3-205ENST00000463097 MRPL50Q8N5N7 158 aaKnown RBP9.28□□□□□ -0.92
COPS3-205ENST00000463097 OCSTAMPQ9BR26 566 aa9.28□□□□□ -0.92
COPS3-205ENST00000463097 CHIC2Q9UKJ5 165 aa9.28□□□□□ -0.92
COPS3-205ENST00000463097 KCNH2Q12809 1159 aa9.27□□□□□ -0.93
COPS3-205ENST00000463097 DPYDQ12882 1025 aa9.27□□□□□ -0.93
COPS3-205ENST00000463097 SWI5Q1ZZU3 235 aa9.27□□□□□ -0.93
COPS3-205ENST00000463097 EML3Q32P44 896 aa9.27□□□□□ -0.93
COPS3-205ENST00000463097 EVA1BQ9NVM1 165 aa9.27□□□□□ -0.93
COPS3-205ENST00000463097 NR1I2O75469 434 aa9.26□□□□□ -0.93
COPS3-205ENST00000463097 TRIM50Q86XT4 487 aa9.26□□□□□ -0.93
COPS3-205ENST00000463097 SIRT1Q96EB6 747 aa9.26□□□□□ -0.93
COPS3-205ENST00000463097 IGSF5Q9NSI5 407 aa9.26□□□□□ -0.93
COPS3-205ENST00000463097 CCNYL3P0C7X3 344 aa9.25□□□□□ -0.93
COPS3-205ENST00000463097 MARSP56192 900 aaKnown RBP9.25□□□□□ -0.93
COPS3-205ENST00000463097 CLDN10P78369 228 aa9.25□□□□□ -0.93
COPS3-205ENST00000463097 NOM1Q5C9Z4 860 aaKnown RBP9.25□□□□□ -0.93
COPS3-205ENST00000463097 TRAF7Q6Q0C0 670 aa9.25□□□□□ -0.93
COPS3-205ENST00000463097 C1orf216Q8TAB5 229 aa9.25□□□□□ -0.93
COPS3-205ENST00000463097 MRRFQ96E11 262 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms