RNA–Protein interactions for RNA: ENST00000462997.5

POLR3F-203, Transcript of RNA polymerase III subunit F, humanhuman

TSL 1 (best)

Gene POLR3F, Length 2,257 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3F-203ENST00000462997 PDE3AQ14432 1141 aa13.79□□□□□ -0.2
POLR3F-203ENST00000462997 SENP3Q9H4L4 574 aaPredicted RBP13.79□□□□□ -0.2
POLR3F-203ENST00000462997 COL3A1P02461 1466 aaPredicted RBP13.78□□□□□ -0.2
POLR3F-203ENST00000462997 NEUROD2Q15784 382 aa13.78□□□□□ -0.2
POLR3F-203ENST00000462997 SKAP1Q86WV1 359 aa13.78□□□□□ -0.2
POLR3F-203ENST00000462997 ANKLE2Q86XL3 938 aa13.78□□□□□ -0.2
POLR3F-203ENST00000462997 TBX22Q9Y458 520 aa13.77□□□□□ -0.21
POLR3F-203ENST00000462997 DIP2AQ14689 1571 aa13.76□□□□□ -0.21
POLR3F-203ENST00000462997 U2AF1L5P0DN76 240 aaPredicted RBP13.76□□□□□ -0.21
POLR3F-203ENST00000462997 U2AF1Q01081 240 aaKnown RBP eCLIP13.76□□□□□ -0.21
POLR3F-203ENST00000462997 GGNBP2Q9H3C7 697 aa13.76□□□□□ -0.21
POLR3F-203ENST00000462997 ZBTB47Q9UFB7 747 aaPredicted RBP13.76□□□□□ -0.21
POLR3F-203ENST00000462997 METP08581 1390 aa13.76□□□□□ -0.21
POLR3F-203ENST00000462997 FYB1O15117 783 aa13.75□□□□□ -0.21
POLR3F-203ENST00000462997 HDGFL2Q7Z4V5 671 aaPredicted RBP13.75□□□□□ -0.21
POLR3F-203ENST00000462997 NPM2Q86SE8 214 aaKnown RBP13.75□□□□□ -0.21
POLR3F-203ENST00000462997 CDK19Q9BWU1 502 aa13.75□□□□□ -0.21
POLR3F-203ENST00000462997 CANXP27824 592 aaKnown RBP13.74□□□□□ -0.21
POLR3F-203ENST00000462997 RARSP54136 660 aaKnown RBP13.74□□□□□ -0.21
POLR3F-203ENST00000462997 SIRT1Q96EB6 747 aa13.74□□□□□ -0.21
POLR3F-203ENST00000462997 MYH16Q9H6N6 1097 aa13.74□□□□□ -0.21
POLR3F-203ENST00000462997 TECPR2O15040 1411 aa13.73□□□□□ -0.21
POLR3F-203ENST00000462997 ATP7BP35670 1465 aa13.73□□□□□ -0.21
POLR3F-203ENST00000462997 KIF20BQ96Q89 1820 aa13.73□□□□□ -0.21
POLR3F-203ENST00000462997 SLC26A8Q96RN1 970 aa13.73□□□□□ -0.21
POLR3F-203ENST00000462997 PLEKHF1Q96S99 279 aa13.73□□□□□ -0.21
POLR3F-203ENST00000462997 KNDC1Q76NI1 1749 aa13.72□□□□□ -0.21
POLR3F-203ENST00000462997 PNPLA6Q8IY17 1366 aa13.72□□□□□ -0.21
POLR3F-203ENST00000462997 CLUAP1Q96AJ1 413 aa13.72□□□□□ -0.21
POLR3F-203ENST00000462997 PIK3R4Q99570 1358 aa13.72□□□□□ -0.21
POLR3F-203ENST00000462997 PANK1Q8TE04 598 aa13.71□□□□□ -0.21
POLR3F-203ENST00000462997 CABP1Q9NZU7 370 aa13.71□□□□□ -0.21
POLR3F-203ENST00000462997 AAMPQ13685 434 aa13.71□□□□□ -0.21
POLR3F-203ENST00000462997 NPHP4O75161 1426 aaPredicted RBP13.7□□□□□ -0.22
POLR3F-203ENST00000462997 FAM135BQ49AJ0 1406 aa13.7□□□□□ -0.22
POLR3F-203ENST00000462997 U2SURPO15042 1029 aaKnown RBP13.7□□□□□ -0.22
POLR3F-203ENST00000462997 FAM161AQ3B820 660 aa13.7□□□□□ -0.22
POLR3F-203ENST00000462997 COG6Q9Y2V7 657 aa13.7□□□□□ -0.22
POLR3F-203ENST00000462997 CPS1P31327 1500 aa13.7□□□□□ -0.22
POLR3F-203ENST00000462997 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
POLR3F-203ENST00000462997 FRAT1Q92837 279 aaPredicted RBP13.7□□□□□ -0.22
POLR3F-203ENST00000462997 CDC42BPGQ6DT37 1551 aa13.69□□□□□ -0.22
POLR3F-203ENST00000462997 PTPRUQ92729 1446 aa13.69□□□□□ -0.22
POLR3F-203ENST00000462997 MAPK8IP3Q9UPT6 1336 aa13.69□□□□□ -0.22
POLR3F-203ENST00000462997 TMPOP42166 694 aaKnown RBP13.69□□□□□ -0.22
POLR3F-203ENST00000462997 C8orf34Q49A92 452 aa13.69□□□□□ -0.22
POLR3F-203ENST00000462997 WAPLQ7Z5K2 1190 aa13.69□□□□□ -0.22
POLR3F-203ENST00000462997 NCKAP5LQ9HCH0 1330 aa13.68□□□□□ -0.22
POLR3F-203ENST00000462997 DIAPH1O60610 1272 aaKnown RBP13.68□□□□□ -0.22
POLR3F-203ENST00000462997 IGHDP01880 384 aa13.68□□□□□ -0.22
POLR3F-203ENST00000462997 LMTK3Q96Q04 1460 aa13.67□□□□□ -0.22
POLR3F-203ENST00000462997 RGS3P49796 1198 aa13.67□□□□□ -0.22
POLR3F-203ENST00000462997 DDRGK1Q96HY6 314 aa13.67□□□□□ -0.22
POLR3F-203ENST00000462997 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
POLR3F-203ENST00000462997 IL16Q14005 1332 aa13.67□□□□□ -0.22
POLR3F-203ENST00000462997 PNNQ9H307 717 aaKnown RBP13.66□□□□□ -0.22
POLR3F-203ENST00000462997 AMOTL2Q9Y2J4 779 aa13.66□□□□□ -0.22
POLR3F-203ENST00000462997 CPSF1Q10570 1443 aaKnown RBP13.66□□□□□ -0.22
POLR3F-203ENST00000462997 PTCH1Q13635 1447 aa13.66□□□□□ -0.22
POLR3F-203ENST00000462997 RLBP1P12271 317 aa13.66□□□□□ -0.22
POLR3F-203ENST00000462997 BCL2L13Q9BXK5 485 aa13.66□□□□□ -0.22
POLR3F-203ENST00000462997 ROBO2Q9HCK4 1378 aa13.65□□□□□ -0.22
POLR3F-203ENST00000462997 EDC4Q6P2E9 1401 aaKnown RBP13.65□□□□□ -0.22
POLR3F-203ENST00000462997 WASLO00401 505 aaPredicted RBP13.65□□□□□ -0.22
POLR3F-203ENST00000462997 XRN1Q8IZH2 1706 aaKnown RBP13.65□□□□□ -0.23
POLR3F-203ENST00000462997 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
POLR3F-203ENST00000462997 PPIP5K1Q6PFW1 1433 aa13.64□□□□□ -0.23
POLR3F-203ENST00000462997 NBR1Q14596 966 aa13.64□□□□□ -0.23
POLR3F-203ENST00000462997 PMFBP1Q8TBY8 1022 aa13.64□□□□□ -0.23
POLR3F-203ENST00000462997 TSR2Q969E8 191 aaKnown RBP13.64□□□□□ -0.23
POLR3F-203ENST00000462997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.64□□□□□ -0.23
POLR3F-203ENST00000462997 TNNQ9UQP3 1299 aa13.64□□□□□ -0.23
POLR3F-203ENST00000462997 FCHSD2O94868 740 aa13.63□□□□□ -0.23
POLR3F-203ENST00000462997 ZKSCAN2Q63HK3 967 aa13.63□□□□□ -0.23
POLR3F-203ENST00000462997 POLKQ9UBT6 870 aa13.63□□□□□ -0.23
POLR3F-203ENST00000462997 HSPA2P54652 639 aa13.62□□□□□ -0.23
POLR3F-203ENST00000462997 RIPK4P57078 832 aa13.62□□□□□ -0.23
POLR3F-203ENST00000462997 EXOSC9Q06265 439 aaKnown RBP13.62□□□□□ -0.23
POLR3F-203ENST00000462997 MVPQ14764 893 aaKnown RBP13.62□□□□□ -0.23
POLR3F-203ENST00000462997 CHD2O14647 1828 aaKnown RBP13.62□□□□□ -0.23
POLR3F-203ENST00000462997 PCDHB15Q9Y5E8 787 aa13.61□□□□□ -0.23
POLR3F-203ENST00000462997 CDK12Q9NYV4 1490 aaPredicted RBP13.61□□□□□ -0.23
POLR3F-203ENST00000462997 MON2Q7Z3U7 1717 aa13.61□□□□□ -0.23
POLR3F-203ENST00000462997 KCNA6P17658 529 aa13.61□□□□□ -0.23
POLR3F-203ENST00000462997 RSPH6AQ9H0K4 717 aa13.61□□□□□ -0.23
POLR3F-203ENST00000462997 AATKQ6ZMQ8 1374 aa13.61□□□□□ -0.23
POLR3F-203ENST00000462997 DZIP1LQ8IYY4 767 aaKnown RBP13.6□□□□□ -0.23
POLR3F-203ENST00000462997 SMC4Q9NTJ3 1288 aa13.6□□□□□ -0.23
POLR3F-203ENST00000462997 FTSJ3Q8IY81 847 aaKnown RBP13.6□□□□□ -0.23
POLR3F-203ENST00000462997 ITSN1Q15811 1721 aa13.59□□□□□ -0.23
POLR3F-203ENST00000462997 AKAP12Q02952 1782 aa13.59□□□□□ -0.23
POLR3F-203ENST00000462997 PRKAR2BP31323 418 aa13.59□□□□□ -0.23
POLR3F-203ENST00000462997 NUDT16Q96DE0 195 aaKnown RBP13.59□□□□□ -0.23
POLR3F-203ENST00000462997 NWD1Q149M9 1564 aa13.59□□□□□ -0.23
POLR3F-203ENST00000462997 VIRMAQ69YN4 1812 aaKnown RBP13.59□□□□□ -0.23
POLR3F-203ENST00000462997 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
POLR3F-203ENST00000462997 SSH1Q8WYL5 1049 aa13.59□□□□□ -0.23
POLR3F-203ENST00000462997 CCDC61Q9Y6R9 512 aa13.59□□□□□ -0.23
POLR3F-203ENST00000462997 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.58□□□□□ -0.24
POLR3F-203ENST00000462997 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms