RNA–Protein interactions for RNA: ENST00000462657.1

ANKRD28-207, Transcript of ankyrin repeat domain 28, humanhuman

TSL 3

Gene ANKRD28, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-207ENST00000462657 POTECB2RU33 542 aa7.54□□□□□ -1.2
ANKRD28-207ENST00000462657 SKIV2LQ15477 1246 aaKnown RBP7.54□□□□□ -1.2
ANKRD28-207ENST00000462657 SH3D19Q5HYK7 790 aa7.54□□□□□ -1.2
ANKRD28-207ENST00000462657 POLR3EQ9NVU0 708 aa7.54□□□□□ -1.2
ANKRD28-207ENST00000462657 MAP10Q9P2G4 905 aa7.54□□□□□ -1.2
ANKRD28-207ENST00000462657 DACH1Q9UI36 760 aa7.54□□□□□ -1.2
ANKRD28-207ENST00000462657 NUTM2BA6NNL0 878 aaPredicted RBP7.53□□□□□ -1.2
ANKRD28-207ENST00000462657 NUTM2EB1AL46 878 aaPredicted RBP7.53□□□□□ -1.2
ANKRD28-207ENST00000462657 AXIN1O15169 862 aa7.53□□□□□ -1.2
ANKRD28-207ENST00000462657 LINC01559Q495D7 138 aa7.53□□□□□ -1.2
ANKRD28-207ENST00000462657 NUTM2DQ5VT03 806 aaPredicted RBP7.53□□□□□ -1.2
ANKRD28-207ENST00000462657 NUTM2AQ8IVF1 878 aaPredicted RBP7.53□□□□□ -1.2
ANKRD28-207ENST00000462657 EHBP1Q8NDI1 1231 aa7.53□□□□□ -1.2
ANKRD28-207ENST00000462657 DDRGK1Q96HY6 314 aa7.53□□□□□ -1.2
ANKRD28-207ENST00000462657 LOC100996750A0A140TA64 210 aa7.52□□□□□ -1.21
ANKRD28-207ENST00000462657 CTHP32929 405 aa7.52□□□□□ -1.21
ANKRD28-207ENST00000462657 FBXO31Q5XUX0 539 aaPredicted RBP7.52□□□□□ -1.21
ANKRD28-207ENST00000462657 MPNDQ8N594 471 aa7.52□□□□□ -1.21
ANKRD28-207ENST00000462657 HPS1Q92902 700 aa7.52□□□□□ -1.21
ANKRD28-207ENST00000462657 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.52□□□□□ -1.21
ANKRD28-207ENST00000462657 KRTAP4-6Q9BYQ5 205 aa7.52□□□□□ -1.21
ANKRD28-207ENST00000462657 ALDH1A1P00352 501 aa7.51□□□□□ -1.21
ANKRD28-207ENST00000462657 VARSP26640 1264 aaKnown RBP7.5□□□□□ -1.21
ANKRD28-207ENST00000462657 PPP2R2DQ66LE6 453 aa7.5□□□□□ -1.21
ANKRD28-207ENST00000462657 HELBQ8NG08 1087 aaPredicted RBP7.5□□□□□ -1.21
ANKRD28-207ENST00000462657 PROCA1Q8NCQ7 364 aaPredicted RBP7.49□□□□□ -1.21
ANKRD28-207ENST00000462657 TSC1Q92574 1164 aa7.49□□□□□ -1.21
ANKRD28-207ENST00000462657 ZNF775Q96BV0 537 aaPredicted RBP7.48□□□□□ -1.21
ANKRD28-207ENST00000462657 GMPR2Q9P2T1 348 aaKnown RBP7.48□□□□□ -1.21
ANKRD28-207ENST00000462657 CTDSPL2Q05D32 466 aa7.47□□□□□ -1.21
ANKRD28-207ENST00000462657 C4orf48Q5BLP8 95 aa7.47□□□□□ -1.21
ANKRD28-207ENST00000462657 FOXJ1Q92949 421 aa7.47□□□□□ -1.21
ANKRD28-207ENST00000462657 TLL2Q9Y6L7 1015 aa7.47□□□□□ -1.21
ANKRD28-207ENST00000462657 SH3RF1Q7Z6J0 888 aa7.46□□□□□ -1.22
ANKRD28-207ENST00000462657 ATP13A2Q9NQ11 1180 aa7.46□□□□□ -1.22
ANKRD28-207ENST00000462657 ARMC2Q8NEN0 867 aa7.45□□□□□ -1.22
ANKRD28-207ENST00000462657 FAM174AQ8TBP5 190 aa7.45□□□□□ -1.22
ANKRD28-207ENST00000462657 CDK15Q96Q40 435 aa7.45□□□□□ -1.22
ANKRD28-207ENST00000462657 GOPCQ9HD26 462 aa7.45□□□□□ -1.22
ANKRD28-207ENST00000462657 WASF2Q9Y6W5 498 aa7.45□□□□□ -1.22
ANKRD28-207ENST00000462657 SH3BP5LQ7L8J4 393 aa7.44□□□□□ -1.22
ANKRD28-207ENST00000462657 BPHLQ86WA6 291 aaPredicted RBP7.44□□□□□ -1.22
ANKRD28-207ENST00000462657 C1QTNF2Q9BXJ5 285 aa7.44□□□□□ -1.22
ANKRD28-207ENST00000462657 LRRN4Q8WUT4 740 aa7.43□□□□□ -1.22
ANKRD28-207ENST00000462657 ADH1CP00326 375 aa7.42□□□□□ -1.22
ANKRD28-207ENST00000462657 NEUROD2Q15784 382 aa7.42□□□□□ -1.22
ANKRD28-207ENST00000462657 NBPF14Q5TI25 921 aa7.42□□□□□ -1.22
ANKRD28-207ENST00000462657 GPKOWQ92917 476 aaPredicted RBP eCLIP7.42□□□□□ -1.22
ANKRD28-207ENST00000462657 KLF16Q9BXK1 252 aaPredicted RBP7.42□□□□□ -1.22
ANKRD28-207ENST00000462657 C11orf95C9JLR9 678 aaPredicted RBP7.41□□□□□ -1.22
ANKRD28-207ENST00000462657 CAPN5O15484 640 aaPredicted RBP7.41□□□□□ -1.22
ANKRD28-207ENST00000462657 BRPF1P55201 1214 aaPredicted RBP7.41□□□□□ -1.22
ANKRD28-207ENST00000462657 NNTQ13423 1086 aa7.41□□□□□ -1.22
ANKRD28-207ENST00000462657 TRMT44Q8IYL2 757 aaKnown RBP7.41□□□□□ -1.22
ANKRD28-207ENST00000462657 TRIM47Q96LD4 638 aa7.41□□□□□ -1.22
ANKRD28-207ENST00000462657 GRM5P41594 1212 aa7.4□□□□□ -1.22
ANKRD28-207ENST00000462657 LCE2AQ5TA79 106 aaPredicted RBP7.4□□□□□ -1.22
ANKRD28-207ENST00000462657 TRIM46Q7Z4K8 759 aa7.4□□□□□ -1.22
ANKRD28-207ENST00000462657 SENP2Q9HC62 589 aa7.4□□□□□ -1.22
ANKRD28-207ENST00000462657 SNRPBP14678 240 aaKnown RBP7.39□□□□□ -1.23
ANKRD28-207ENST00000462657 TIMP2P16035 220 aa7.39□□□□□ -1.23
ANKRD28-207ENST00000462657 RFC5P40937 340 aa7.39□□□□□ -1.23
ANKRD28-207ENST00000462657 AGERQ15109 404 aa7.39□□□□□ -1.23
ANKRD28-207ENST00000462657 PDXDC2PQ6P474 469 aa7.39□□□□□ -1.23
ANKRD28-207ENST00000462657 FKBPLQ9UIM3 349 aa7.39□□□□□ -1.23
ANKRD28-207ENST00000462657 MAP4K5Q9Y4K4 846 aa7.39□□□□□ -1.23
ANKRD28-207ENST00000462657 ZC3H4Q9UPT8 1303 aaKnown RBP7.38□□□□□ -1.23
ANKRD28-207ENST00000462657 AP1G2O75843 785 aa7.38□□□□□ -1.23
ANKRD28-207ENST00000462657 NR3C2P08235 984 aa7.38□□□□□ -1.23
ANKRD28-207ENST00000462657 NR5A1Q13285 461 aa7.38□□□□□ -1.23
ANKRD28-207ENST00000462657 NR6A1Q15406 480 aa7.38□□□□□ -1.23
ANKRD28-207ENST00000462657 KIFC2Q96AC6 838 aa7.38□□□□□ -1.23
ANKRD28-207ENST00000462657 USP17L8P0C7I0 530 aa7.37□□□□□ -1.23
ANKRD28-207ENST00000462657 BMP1P13497 986 aa7.37□□□□□ -1.23
ANKRD28-207ENST00000462657 ERFEQ4G0M1 354 aa7.37□□□□□ -1.23
ANKRD28-207ENST00000462657 TPRNQ4KMQ1 711 aa7.37□□□□□ -1.23
ANKRD28-207ENST00000462657 IL27Q8NEV9 243 aa7.37□□□□□ -1.23
ANKRD28-207ENST00000462657 PCMTD1Q96MG8 357 aaPredicted RBP7.37□□□□□ -1.23
ANKRD28-207ENST00000462657 HMX1Q9NP08 348 aaPredicted RBP7.37□□□□□ -1.23
ANKRD28-207ENST00000462657 WDR4P57081 412 aaKnown RBP7.36□□□□□ -1.23
ANKRD28-207ENST00000462657 ARID5BQ14865 1188 aa7.36□□□□□ -1.23
ANKRD28-207ENST00000462657 OCSTAMPQ9BR26 566 aa7.36□□□□□ -1.23
ANKRD28-207ENST00000462657 MAGEB6P1A0A0J9YX57 407 aa7.35□□□□□ -1.23
ANKRD28-207ENST00000462657 TREML4Q6UXN2 200 aa7.35□□□□□ -1.23
ANKRD28-207ENST00000462657 EPS8L1Q8TE68 723 aa7.35□□□□□ -1.23
ANKRD28-207ENST00000462657 ATP1B4Q9UN42 357 aaPredicted RBP7.35□□□□□ -1.23
ANKRD28-207ENST00000462657 GPSM3Q9Y4H4 160 aa7.34□□□□□ -1.23
ANKRD28-207ENST00000462657 ZIC2O95409 532 aaPredicted RBP7.33□□□□□ -1.24
ANKRD28-207ENST00000462657 NFX1Q12986 1120 aaKnown RBP7.33□□□□□ -1.24
ANKRD28-207ENST00000462657 TMEM259Q4ZIN3 620 aa7.33□□□□□ -1.24
ANKRD28-207ENST00000462657 MRPL14Q6P1L8 145 aaKnown RBP7.33□□□□□ -1.24
ANKRD28-207ENST00000462657 VASH1Q7L8A9 365 aaPredicted RBP7.33□□□□□ -1.24
ANKRD28-207ENST00000462657 ITPKCQ96DU7 683 aa7.33□□□□□ -1.24
ANKRD28-207ENST00000462657 ZFP42Q96MM3 310 aa7.33□□□□□ -1.24
ANKRD28-207ENST00000462657 ARHGAP9Q9BRR9 750 aa7.33□□□□□ -1.24
ANKRD28-207ENST00000462657 CARD14Q9BXL6 1004 aa7.33□□□□□ -1.24
ANKRD28-207ENST00000462657 TRIM34Q9BYJ4 488 aa7.33□□□□□ -1.24
ANKRD28-207ENST00000462657 ZFAND3Q9H8U3 227 aa7.33□□□□□ -1.24
ANKRD28-207ENST00000462657 FSHRP23945 695 aa7.32□□□□□ -1.24
ANKRD28-207ENST00000462657 PTK2Q05397 1052 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms