RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 NME9Q86XW9 330 aa18.43■□□□□ 0.54
PBRM1-219ENST00000462207 PXDNQ92626 1479 aa18.42■□□□□ 0.54
PBRM1-219ENST00000462207 PIK3C2AO00443 1686 aa18.42■□□□□ 0.54
PBRM1-219ENST00000462207 UBAP1LF5GYI3 381 aa18.42■□□□□ 0.54
PBRM1-219ENST00000462207 GGNBP2Q9H3C7 697 aa18.42■□□□□ 0.54
PBRM1-219ENST00000462207 ZRANB1Q9UGI0 708 aa18.42■□□□□ 0.54
PBRM1-219ENST00000462207 NHSL1Q5SYE7 1610 aa18.42■□□□□ 0.54
PBRM1-219ENST00000462207 FYB1O15117 783 aa18.41■□□□□ 0.54
PBRM1-219ENST00000462207 NPC1L1Q9UHC9 1359 aa18.41■□□□□ 0.54
PBRM1-219ENST00000462207 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
PBRM1-219ENST00000462207 ANP32CO43423 234 aa18.41■□□□□ 0.54
PBRM1-219ENST00000462207 TOM1O60784 492 aa18.41■□□□□ 0.54
PBRM1-219ENST00000462207 PIP4K2BP78356 416 aa18.41■□□□□ 0.54
PBRM1-219ENST00000462207 KRT28Q7Z3Y7 464 aa18.41■□□□□ 0.54
PBRM1-219ENST00000462207 PAK3O75914 559 aaPredicted RBP18.4■□□□□ 0.54
PBRM1-219ENST00000462207 MIER1Q8N108 512 aa18.4■□□□□ 0.54
PBRM1-219ENST00000462207 PRKRIP1Q9H875 184 aaPredicted RBP18.4■□□□□ 0.54
PBRM1-219ENST00000462207 ANKRD26Q9UPS8 1709 aa18.4■□□□□ 0.54
PBRM1-219ENST00000462207 PARD3Q8TEW0 1356 aa18.39■□□□□ 0.53
PBRM1-219ENST00000462207 SCAF1Q9H7N4 1312 aaKnown RBP18.39■□□□□ 0.53
PBRM1-219ENST00000462207 NSD2O96028 1365 aa18.38■□□□□ 0.53
PBRM1-219ENST00000462207 TTC21AQ8NDW8 1320 aa18.38■□□□□ 0.53
PBRM1-219ENST00000462207 NUTM2GQ5VZR2 741 aa18.37■□□□□ 0.53
PBRM1-219ENST00000462207 MARF1Q9Y4F3 1742 aaKnown RBP18.37■□□□□ 0.53
PBRM1-219ENST00000462207 ALS2Q96Q42 1657 aa18.37■□□□□ 0.53
PBRM1-219ENST00000462207 AHDC1Q5TGY3 1603 aaPredicted RBP18.37■□□□□ 0.53
PBRM1-219ENST00000462207 OVOS2A0A0J9YW53 1432 aa18.37■□□□□ 0.53
PBRM1-219ENST00000462207 OVOS2Q6IE36 1432 aa18.37■□□□□ 0.53
PBRM1-219ENST00000462207 BRD4O60885 1362 aaPredicted RBP18.36■□□□□ 0.53
PBRM1-219ENST00000462207 SOS2Q07890 1332 aaPredicted RBP18.35■□□□□ 0.53
PBRM1-219ENST00000462207 TNS3Q68CZ2 1445 aa18.35■□□□□ 0.53
PBRM1-219ENST00000462207 TNNT2P45379 298 aaPredicted RBP18.35■□□□□ 0.53
PBRM1-219ENST00000462207 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
PBRM1-219ENST00000462207 ABTB2Q8N961 1025 aa18.34■□□□□ 0.53
PBRM1-219ENST00000462207 SBNO1A3KN83 1393 aa18.34■□□□□ 0.53
PBRM1-219ENST00000462207 USP54Q70EL1 1684 aa18.34■□□□□ 0.53
PBRM1-219ENST00000462207 LMOD2Q6P5Q4 547 aa18.33■□□□□ 0.53
PBRM1-219ENST00000462207 USP31Q70CQ4 1352 aa18.32■□□□□ 0.52
PBRM1-219ENST00000462207 PLEKHG5O94827 1062 aa18.32■□□□□ 0.52
PBRM1-219ENST00000462207 NLRP6P59044 892 aa18.32■□□□□ 0.52
PBRM1-219ENST00000462207 RALBP1Q15311 655 aa18.32■□□□□ 0.52
PBRM1-219ENST00000462207 COG3Q96JB2 828 aa18.32■□□□□ 0.52
PBRM1-219ENST00000462207 PHLPP1O60346 1717 aa18.32■□□□□ 0.52
PBRM1-219ENST00000462207 SPATA31A3Q5VYP0 1347 aa18.32■□□□□ 0.52
PBRM1-219ENST00000462207 COL16A1Q07092 1604 aaPredicted RBP18.31■□□□□ 0.52
PBRM1-219ENST00000462207 FBLN1P23142 703 aa18.31■□□□□ 0.52
PBRM1-219ENST00000462207 MYBBP1AQ9BQG0 1328 aaKnown RBP18.3■□□□□ 0.52
PBRM1-219ENST00000462207 SOX12O15370 315 aa18.29■□□□□ 0.52
PBRM1-219ENST00000462207 MED1Q15648 1581 aaPredicted RBP18.29■□□□□ 0.52
PBRM1-219ENST00000462207 PPP2R1AP30153 589 aa18.29■□□□□ 0.52
PBRM1-219ENST00000462207 CCDC184Q52MB2 194 aa18.28■□□□□ 0.52
PBRM1-219ENST00000462207 PELP1Q8IZL8 1130 aaKnown RBP18.28■□□□□ 0.52
PBRM1-219ENST00000462207 SLIT3O75094 1523 aa18.27■□□□□ 0.52
PBRM1-219ENST00000462207 ARHGEF10O15013 1369 aa18.27■□□□□ 0.51
PBRM1-219ENST00000462207 CRYBG1Q9Y4K1 1723 aa18.27■□□□□ 0.51
PBRM1-219ENST00000462207 USP19O94966 1318 aa18.26■□□□□ 0.51
PBRM1-219ENST00000462207 PHRF1Q9P1Y6 1649 aaKnown RBP18.26■□□□□ 0.51
PBRM1-219ENST00000462207 NLRP13Q86W25 1043 aa18.25■□□□□ 0.51
PBRM1-219ENST00000462207 NFAT5O94916 1531 aa18.25■□□□□ 0.51
PBRM1-219ENST00000462207 CABLES1Q8TDN4 633 aa18.25■□□□□ 0.51
PBRM1-219ENST00000462207 RRS1Q15050 365 aaKnown RBP18.24■□□□□ 0.51
PBRM1-219ENST00000462207 ABCA3Q99758 1704 aa18.24■□□□□ 0.51
PBRM1-219ENST00000462207 EMILIN1Q9Y6C2 1016 aa18.23■□□□□ 0.51
PBRM1-219ENST00000462207 AATKQ6ZMQ8 1374 aa18.22■□□□□ 0.51
PBRM1-219ENST00000462207 PNPLA6Q8IY17 1366 aa18.22■□□□□ 0.51
PBRM1-219ENST00000462207 LRRC59Q96AG4 307 aaKnown RBP18.22■□□□□ 0.51
PBRM1-219ENST00000462207 PEAK1Q9H792 1746 aa18.22■□□□□ 0.51
PBRM1-219ENST00000462207 MTHFSP49914 203 aa18.21■□□□□ 0.51
PBRM1-219ENST00000462207 POLKQ9UBT6 870 aa18.21■□□□□ 0.51
PBRM1-219ENST00000462207 MAP2P11137 1827 aaKnown RBP18.21■□□□□ 0.51
PBRM1-219ENST00000462207 GCP02774 474 aa18.21■□□□□ 0.51
PBRM1-219ENST00000462207 SMG6Q86US8 1419 aaKnown RBP18.21■□□□□ 0.5
PBRM1-219ENST00000462207 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
PBRM1-219ENST00000462207 COL22A1Q8NFW1 1626 aaPredicted RBP18.2■□□□□ 0.5
PBRM1-219ENST00000462207 MAP3K19Q56UN5 1328 aa18.2■□□□□ 0.5
PBRM1-219ENST00000462207 MRS2Q9HD23 443 aa18.19■□□□□ 0.5
PBRM1-219ENST00000462207 LTN1O94822 1766 aa18.19■□□□□ 0.5
PBRM1-219ENST00000462207 PPM1GO15355 546 aaPredicted RBP18.19■□□□□ 0.5
PBRM1-219ENST00000462207 HSPA1LP34931 641 aa18.18■□□□□ 0.5
PBRM1-219ENST00000462207 KCNH5Q8NCM2 988 aa18.17■□□□□ 0.5
PBRM1-219ENST00000462207 ZBTB7CA1YPR0 619 aa18.17■□□□□ 0.5
PBRM1-219ENST00000462207 ZC3H6P61129 1189 aaKnown RBP18.17■□□□□ 0.5
PBRM1-219ENST00000462207 COL3A1P02461 1466 aaPredicted RBP18.17■□□□□ 0.5
PBRM1-219ENST00000462207 CDK12Q9NYV4 1490 aaPredicted RBP18.17■□□□□ 0.5
PBRM1-219ENST00000462207 SHPRHQ149N8 1683 aa18.16■□□□□ 0.5
PBRM1-219ENST00000462207 HAP1P54257 671 aaPredicted RBP18.14■□□□□ 0.49
PBRM1-219ENST00000462207 KIAA0232Q92628 1395 aa18.14■□□□□ 0.49
PBRM1-219ENST00000462207 ARHGEF25Q86VW2 580 aa18.13■□□□□ 0.49
PBRM1-219ENST00000462207 FLT4P35916 1363 aa18.12■□□□□ 0.49
PBRM1-219ENST00000462207 JCADQ9P266 1359 aa18.12■□□□□ 0.49
PBRM1-219ENST00000462207 AMPHP49418 695 aa18.12■□□□□ 0.49
PBRM1-219ENST00000462207 HOXC9P31274 260 aa18.11■□□□□ 0.49
PBRM1-219ENST00000462207 CHRNA2Q15822 529 aa18.11■□□□□ 0.49
PBRM1-219ENST00000462207 HSP90AB2PQ58FF8 381 aa18.11■□□□□ 0.49
PBRM1-219ENST00000462207 CFAP53Q96M91 514 aa18.11■□□□□ 0.49
PBRM1-219ENST00000462207 RTL1A6NKG5 1358 aa18.11■□□□□ 0.49
PBRM1-219ENST00000462207 CPDO75976 1380 aa18.1■□□□□ 0.49
PBRM1-219ENST00000462207 COL18A1P39060 1754 aa18.1■□□□□ 0.49
PBRM1-219ENST00000462207 NUTM2BA6NNL0 878 aaPredicted RBP18.1■□□□□ 0.49
PBRM1-219ENST00000462207 NUTM2EB1AL46 878 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms