RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 BAG6P46379 1132 aa9.17□□□□□ -0.94
SMARCC1-204ENST00000462198 R3HDM1Q15032 1099 aaKnown RBP9.17□□□□□ -0.94
SMARCC1-204ENST00000462198 RASEFQ8IZ41 740 aa9.17□□□□□ -0.94
SMARCC1-204ENST00000462198 SPRYD3Q8NCJ5 442 aa9.17□□□□□ -0.94
SMARCC1-204ENST00000462198 TSHZ2Q9NRE2 1034 aa9.17□□□□□ -0.94
SMARCC1-204ENST00000462198 PTPRUQ92729 1446 aa9.16□□□□□ -0.94
SMARCC1-204ENST00000462198 SOS2Q07890 1332 aaPredicted RBP9.16□□□□□ -0.94
SMARCC1-204ENST00000462198 SENP3-EIF4A1A0A087X0R7 540 aa9.16□□□□□ -0.94
SMARCC1-204ENST00000462198 SEPT12Q8IYM1 358 aa9.16□□□□□ -0.94
SMARCC1-204ENST00000462198 KLHL34Q8N239 644 aa9.15□□□□□ -0.94
SMARCC1-204ENST00000462198 ORAI2Q96SN7 254 aa9.15□□□□□ -0.94
SMARCC1-204ENST00000462198 KIF15Q9NS87 1388 aa9.14□□□□□ -0.95
SMARCC1-204ENST00000462198 EN1Q05925 392 aaPredicted RBP9.14□□□□□ -0.95
SMARCC1-204ENST00000462198 KRT27Q7Z3Y8 459 aa9.14□□□□□ -0.95
SMARCC1-204ENST00000462198 UNC5CLQ8IV45 518 aa9.14□□□□□ -0.95
SMARCC1-204ENST00000462198 ERBINQ96RT1 1412 aa9.13□□□□□ -0.95
SMARCC1-204ENST00000462198 UNC13BO14795 1591 aa9.12□□□□□ -0.95
SMARCC1-204ENST00000462198 LMTK2Q8IWU2 1503 aa9.12□□□□□ -0.95
SMARCC1-204ENST00000462198 ONECUT3O60422 494 aaPredicted RBP9.12□□□□□ -0.95
SMARCC1-204ENST00000462198 RALGAPBQ86X10 1494 aa9.12□□□□□ -0.95
SMARCC1-204ENST00000462198 GCC2Q8IWJ2 1684 aa9.12□□□□□ -0.95
SMARCC1-204ENST00000462198 TMEM131LA2VDJ0 1609 aa9.12□□□□□ -0.95
SMARCC1-204ENST00000462198 GLI3P10071 1580 aa9.12□□□□□ -0.95
SMARCC1-204ENST00000462198 MARF1Q9Y4F3 1742 aaKnown RBP9.11□□□□□ -0.95
SMARCC1-204ENST00000462198 TRPM2O94759 1503 aa9.11□□□□□ -0.95
SMARCC1-204ENST00000462198 C1orf167Q5SNV9 1468 aa9.11□□□□□ -0.95
SMARCC1-204ENST00000462198 SNPHO15079 494 aa9.11□□□□□ -0.95
SMARCC1-204ENST00000462198 PLCG2P16885 1265 aa9.11□□□□□ -0.95
SMARCC1-204ENST00000462198 PCDHB13Q9Y5F0 798 aa9.11□□□□□ -0.95
SMARCC1-204ENST00000462198 ZNF784Q8NCA9 323 aaPredicted RBP9.1□□□□□ -0.95
SMARCC1-204ENST00000462198 SPHKAPQ2M3C7 1700 aa9.1□□□□□ -0.95
SMARCC1-204ENST00000462198 LAMC1P11047 1609 aa9.09□□□□□ -0.95
SMARCC1-204ENST00000462198 COL22A1Q8NFW1 1626 aaPredicted RBP9.09□□□□□ -0.95
SMARCC1-204ENST00000462198 MYOM3Q5VTT5 1437 aa9.09□□□□□ -0.95
SMARCC1-204ENST00000462198 ADGRL3Q9HAR2 1447 aa9.09□□□□□ -0.95
SMARCC1-204ENST00000462198 C1QTNF8P60827 252 aa9.09□□□□□ -0.95
SMARCC1-204ENST00000462198 IRX5P78411 483 aaPredicted RBP9.09□□□□□ -0.95
SMARCC1-204ENST00000462198 CCDC9Q9Y3X0 531 aaKnown RBP9.09□□□□□ -0.95
SMARCC1-204ENST00000462198 MYOM2P54296 1465 aa9.08□□□□□ -0.96
SMARCC1-204ENST00000462198 PLEKHG5O94827 1062 aa9.08□□□□□ -0.96
SMARCC1-204ENST00000462198 EZH2Q15910 746 aaKnown RBP9.08□□□□□ -0.96
SMARCC1-204ENST00000462198 MARVELD3Q96A59 401 aa9.08□□□□□ -0.96
SMARCC1-204ENST00000462198 CHIC2Q9UKJ5 165 aa9.08□□□□□ -0.96
SMARCC1-204ENST00000462198 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.08□□□□□ -0.96
SMARCC1-204ENST00000462198 XPCQ01831 940 aaPredicted RBP9.07□□□□□ -0.96
SMARCC1-204ENST00000462198 VPS72Q15906 364 aa9.07□□□□□ -0.96
SMARCC1-204ENST00000462198 PPP1R1BQ9UD71 204 aaPredicted RBP9.07□□□□□ -0.96
SMARCC1-204ENST00000462198 XRN1Q8IZH2 1706 aaKnown RBP9.07□□□□□ -0.96
SMARCC1-204ENST00000462198 METP08581 1390 aa9.07□□□□□ -0.96
SMARCC1-204ENST00000462198 ABCC5O15440 1437 aa9.06□□□□□ -0.96
SMARCC1-204ENST00000462198 SLIT2O94813 1529 aa9.06□□□□□ -0.96
SMARCC1-204ENST00000462198 A0A0G2JS52 829 aa9.06□□□□□ -0.96
SMARCC1-204ENST00000462198 FOXO3O43524 673 aa9.06□□□□□ -0.96
SMARCC1-204ENST00000462198 RPRD2Q5VT52 1461 aaKnown RBP9.06□□□□□ -0.96
SMARCC1-204ENST00000462198 ESCO1Q5FWF5 840 aa9.05□□□□□ -0.96
SMARCC1-204ENST00000462198 FAM182BQ5T319 152 aa9.05□□□□□ -0.96
SMARCC1-204ENST00000462198 KANK4Q5T7N3 995 aaPredicted RBP9.05□□□□□ -0.96
SMARCC1-204ENST00000462198 IFNL1Q8IU54 200 aa9.05□□□□□ -0.96
SMARCC1-204ENST00000462198 TMEM106CQ9BVX2 250 aa9.05□□□□□ -0.96
SMARCC1-204ENST00000462198 NALCNQ8IZF0 1738 aa9.05□□□□□ -0.96
SMARCC1-204ENST00000462198 NPHP3Q7Z494 1330 aa9.05□□□□□ -0.96
SMARCC1-204ENST00000462198 CAMKK2Q96RR4 588 aa9.04□□□□□ -0.96
SMARCC1-204ENST00000462198 SPON1Q9HCB6 807 aa9.04□□□□□ -0.96
SMARCC1-204ENST00000462198 NBR1Q14596 966 aa9.03□□□□□ -0.96
SMARCC1-204ENST00000462198 FAM98CQ17RN3 349 aaKnown RBP9.03□□□□□ -0.96
SMARCC1-204ENST00000462198 TIMELESSQ9UNS1 1208 aa9.03□□□□□ -0.96
SMARCC1-204ENST00000462198 ANKRD30AQ9BXX3 1397 aa9.02□□□□□ -0.97
SMARCC1-204ENST00000462198 KCNQ2O43526 872 aa9.02□□□□□ -0.97
SMARCC1-204ENST00000462198 PLCD3Q8N3E9 789 aa9.02□□□□□ -0.97
SMARCC1-204ENST00000462198 KRTAP3-3Q9BYR6 98 aa9.02□□□□□ -0.97
SMARCC1-204ENST00000462198 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.97
SMARCC1-204ENST00000462198 OCEL1Q9H607 264 aa9.02□□□□□ -0.97
SMARCC1-204ENST00000462198 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.02□□□□□ -0.97
SMARCC1-204ENST00000462198 RGPD1P0DJD0 1748 aa9.02□□□□□ -0.97
SMARCC1-204ENST00000462198 NRXN3Q9Y4C0 1643 aa9.02□□□□□ -0.97
SMARCC1-204ENST00000462198 NBPF8Q3BBV2 869 aa9.01□□□□□ -0.97
SMARCC1-204ENST00000462198 NBPF14Q5TI25 921 aa9.01□□□□□ -0.97
SMARCC1-204ENST00000462198 PPARGC1BQ86YN6 1023 aaKnown RBP9.01□□□□□ -0.97
SMARCC1-204ENST00000462198 CROCC2H7BZ55 1655 aa9□□□□□ -0.97
SMARCC1-204ENST00000462198 CAMTA1Q9Y6Y1 1673 aa9□□□□□ -0.97
SMARCC1-204ENST00000462198 NINLQ9Y2I6 1382 aa9□□□□□ -0.97
SMARCC1-204ENST00000462198 TRIM37O94972 964 aa9□□□□□ -0.97
SMARCC1-204ENST00000462198 APBA3O96018 575 aa9□□□□□ -0.97
SMARCC1-204ENST00000462198 ZNF326Q5BKZ1 582 aaKnown RBP9□□□□□ -0.97
SMARCC1-204ENST00000462198 MIER1Q8N108 512 aa9□□□□□ -0.97
SMARCC1-204ENST00000462198 CABLES1Q8TDN4 633 aa9□□□□□ -0.97
SMARCC1-204ENST00000462198 PXDNQ92626 1479 aa9□□□□□ -0.97
SMARCC1-204ENST00000462198 SPATA31A3Q5VYP0 1347 aa9□□□□□ -0.97
SMARCC1-204ENST00000462198 LRPPRCP42704 1394 aaKnown RBP8.99□□□□□ -0.97
SMARCC1-204ENST00000462198 DISP2A7MBM2 1401 aa8.99□□□□□ -0.97
SMARCC1-204ENST00000462198 DAPK1P53355 1430 aa8.99□□□□□ -0.97
SMARCC1-204ENST00000462198 FAM83GA6ND36 823 aa8.99□□□□□ -0.97
SMARCC1-204ENST00000462198 HS6ST3Q8IZP7 471 aa8.99□□□□□ -0.97
SMARCC1-204ENST00000462198 CHD4Q14839 1912 aa8.99□□□□□ -0.97
SMARCC1-204ENST00000462198 CEP350Q5VT06 3117 aa8.98□□□□□ -0.97
SMARCC1-204ENST00000462198 NUTM2FA1L443 756 aa8.98□□□□□ -0.97
SMARCC1-204ENST00000462198 EMP3P54852 163 aa8.98□□□□□ -0.97
SMARCC1-204ENST00000462198 ROBO2Q9HCK4 1378 aa8.98□□□□□ -0.97
SMARCC1-204ENST00000462198 KRT28Q7Z3Y7 464 aa8.97□□□□□ -0.97
SMARCC1-204ENST00000462198 ADGRL2O95490 1459 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms