RNA–Protein interactions for RNA: ENST00000462038.1

ITM2A-204, Transcript of integral membrane protein 2A, humanhuman

TSL 5

Gene ITM2A, Length 190 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-204ENST00000462038 THAP11Q96EK4 314 aa8.47□□□□□ -1.05
ITM2A-204ENST00000462038 FBXO45P0C2W1 286 aa8.46□□□□□ -1.06
ITM2A-204ENST00000462038 VRTNQ9H8Y1 702 aa8.46□□□□□ -1.06
ITM2A-204ENST00000462038 TSR3Q9UJK0 312 aaKnown RBP8.46□□□□□ -1.06
ITM2A-204ENST00000462038 GOLGA8CPA6NN73 597 aa8.45□□□□□ -1.06
ITM2A-204ENST00000462038 JUNDP17535 347 aa8.45□□□□□ -1.06
ITM2A-204ENST00000462038 STAC3Q96MF2 364 aa8.45□□□□□ -1.06
ITM2A-204ENST00000462038 HS3ST6Q96QI5 342 aa8.45□□□□□ -1.06
ITM2A-204ENST00000462038 GPSM3Q9Y4H4 160 aa8.45□□□□□ -1.06
ITM2A-204ENST00000462038 TMEM88BA6NKF7 163 aa8.44□□□□□ -1.06
ITM2A-204ENST00000462038 APLP1P51693 650 aa8.44□□□□□ -1.06
ITM2A-204ENST00000462038 MCCD1P59942 119 aaPredicted RBP8.44□□□□□ -1.06
ITM2A-204ENST00000462038 ELOAQ14241 798 aaKnown RBP8.44□□□□□ -1.06
ITM2A-204ENST00000462038 ARMC2Q8NEN0 867 aa8.44□□□□□ -1.06
ITM2A-204ENST00000462038 GPKOWQ92917 476 aaPredicted RBP eCLIP8.44□□□□□ -1.06
ITM2A-204ENST00000462038 HPS5Q9UPZ3 1129 aa8.44□□□□□ -1.06
ITM2A-204ENST00000462038 PCDHB3Q9Y5E6 796 aa8.44□□□□□ -1.06
ITM2A-204ENST00000462038 MFAP1P55081 439 aaKnown RBP8.43□□□□□ -1.06
ITM2A-204ENST00000462038 KANK4Q5T7N3 995 aaPredicted RBP8.43□□□□□ -1.06
ITM2A-204ENST00000462038 LHX8Q68G74 356 aa8.43□□□□□ -1.06
ITM2A-204ENST00000462038 RGS22Q8NE09 1264 aa8.43□□□□□ -1.06
ITM2A-204ENST00000462038 MSS51Q4VC12 460 aa8.42□□□□□ -1.06
ITM2A-204ENST00000462038 CDCA8Q53HL2 280 aa8.42□□□□□ -1.06
ITM2A-204ENST00000462038 PLEKHM2Q8IWE5 1019 aa8.42□□□□□ -1.06
ITM2A-204ENST00000462038 EVA1BQ9NVM1 165 aa8.42□□□□□ -1.06
ITM2A-204ENST00000462038 PDXDC2PQ6P474 469 aa8.41□□□□□ -1.06
ITM2A-204ENST00000462038 MAP10Q9P2G4 905 aa8.41□□□□□ -1.06
ITM2A-204ENST00000462038 POTEB3A0JP26 581 aa8.4□□□□□ -1.06
ITM2A-204ENST00000462038 CCNYL3P0C7X3 344 aa8.4□□□□□ -1.06
ITM2A-204ENST00000462038 PTK2Q05397 1052 aa8.4□□□□□ -1.06
ITM2A-204ENST00000462038 B4GALNT3Q6L9W6 998 aa8.4□□□□□ -1.06
ITM2A-204ENST00000462038 POTEBQ6S5H4 581 aa8.4□□□□□ -1.06
ITM2A-204ENST00000462038 LZTS3O60299 673 aaPredicted RBP8.39□□□□□ -1.07
ITM2A-204ENST00000462038 DXOO77932 396 aaKnown RBP8.39□□□□□ -1.07
ITM2A-204ENST00000462038 CTHP32929 405 aa8.39□□□□□ -1.07
ITM2A-204ENST00000462038 KCNH2Q12809 1159 aa8.39□□□□□ -1.07
ITM2A-204ENST00000462038 WNT2BQ93097 391 aa8.39□□□□□ -1.07
ITM2A-204ENST00000462038 CARNS1A5YM72 827 aa8.38□□□□□ -1.07
ITM2A-204ENST00000462038 USP17L3A6NCW0 530 aa8.38□□□□□ -1.07
ITM2A-204ENST00000462038 USP17L4A6NCW7 530 aa8.38□□□□□ -1.07
ITM2A-204ENST00000462038 SKIP12755 728 aa8.38□□□□□ -1.07
ITM2A-204ENST00000462038 BCAMP50895 628 aa8.38□□□□□ -1.07
ITM2A-204ENST00000462038 MMP16P51512 607 aa8.38□□□□□ -1.07
ITM2A-204ENST00000462038 USP17L2Q6R6M4 530 aa8.38□□□□□ -1.07
ITM2A-204ENST00000462038 USP17L1Q7RTZ2 530 aa8.38□□□□□ -1.07
ITM2A-204ENST00000462038 CEP126Q9P2H0 1117 aa8.38□□□□□ -1.07
ITM2A-204ENST00000462038 PIK3CDO00329 1044 aa8.37□□□□□ -1.07
ITM2A-204ENST00000462038 NBPF14Q5TI25 921 aa8.37□□□□□ -1.07
ITM2A-204ENST00000462038 FAM160A2Q8N612 972 aaPredicted RBP8.37□□□□□ -1.07
ITM2A-204ENST00000462038 SPSB2Q99619 263 aa8.37□□□□□ -1.07
ITM2A-204ENST00000462038 NUDT12Q9BQG2 462 aa8.37□□□□□ -1.07
ITM2A-204ENST00000462038 MTMR7Q9Y216 660 aa8.37□□□□□ -1.07
ITM2A-204ENST00000462038 FAM196BA6NMK8 535 aa8.36□□□□□ -1.07
ITM2A-204ENST00000462038 USP17L5A8MUK1 530 aa8.36□□□□□ -1.07
ITM2A-204ENST00000462038 GNEQ9Y223 722 aaKnown RBP8.36□□□□□ -1.07
ITM2A-204ENST00000462038 IVNS1ABPQ9Y6Y0 642 aa8.36□□□□□ -1.07
ITM2A-204ENST00000462038 SLFNL1Q499Z3 407 aa8.35□□□□□ -1.07
ITM2A-204ENST00000462038 PHTF2Q8N3S3 785 aa8.35□□□□□ -1.07
ITM2A-204ENST00000462038 FAM163AQ96GL9 167 aaPredicted RBP8.35□□□□□ -1.07
ITM2A-204ENST00000462038 NOVA2Q9UNW9 492 aaKnown RBP8.35□□□□□ -1.07
ITM2A-204ENST00000462038 ATP5J2-PTCD1G3V325 749 aa8.34□□□□□ -1.07
ITM2A-204ENST00000462038 MAP7D1Q3KQU3 841 aa8.34□□□□□ -1.07
ITM2A-204ENST00000462038 TMEM164Q5U3C3 297 aa8.34□□□□□ -1.07
ITM2A-204ENST00000462038 ANKRD13DQ6ZTN6 518 aa8.34□□□□□ -1.07
ITM2A-204ENST00000462038 NYAP1Q6ZVC0 841 aa8.34□□□□□ -1.07
ITM2A-204ENST00000462038 FAM174AQ8TBP5 190 aa8.34□□□□□ -1.07
ITM2A-204ENST00000462038 WBP1LQ9NX94 342 aa8.34□□□□□ -1.07
ITM2A-204ENST00000462038 MKRN1Q9UHC7 482 aaKnown RBP8.34□□□□□ -1.07
ITM2A-204ENST00000462038 CHIC2Q9UKJ5 165 aa8.34□□□□□ -1.07
ITM2A-204ENST00000462038 ZMIZ1Q9ULJ6 1067 aa8.34□□□□□ -1.07
ITM2A-204ENST00000462038 OCSTAMPQ9BR26 566 aa8.33□□□□□ -1.08
ITM2A-204ENST00000462038 LARP1Q6PKG0 1096 aaKnown RBP8.32□□□□□ -1.08
ITM2A-204ENST00000462038 SND1Q7KZF4 910 aaKnown RBP eCLIP8.32□□□□□ -1.08
ITM2A-204ENST00000462038 RNF135Q8IUD6 432 aa8.32□□□□□ -1.08
ITM2A-204ENST00000462038 CDCA7Q9BWT1 371 aaPredicted RBP8.32□□□□□ -1.08
ITM2A-204ENST00000462038 PCDHB9Q9Y5E1 797 aa8.32□□□□□ -1.08
ITM2A-204ENST00000462038 USP17L15C9J2P7 530 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 USP17L10C9JJH3 530 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 USP17L13C9JLJ4 530 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 USP17L12C9JPN9 530 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 USP17L11C9JVI0 530 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 USP17L21D6R901 530 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 USP17L18D6R9N7 530 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 USP17L22D6RA61 530 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 USP17L17D6RBQ6 530 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 USP17L19D6RCP7 530 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 USP17L20D6RJB6 530 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 USP17L24Q0WX57 530 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 PTK7Q13308 1070 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 CCDC27Q2M243 656 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 PLPP7Q8NBV4 271 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 ADAM32Q8TC27 787 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 CCER1Q8TC90 406 aaPredicted RBP8.31□□□□□ -1.08
ITM2A-204ENST00000462038 STK32AQ8WU08 396 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 ARHGAP9Q9BRR9 750 aa8.31□□□□□ -1.08
ITM2A-204ENST00000462038 ZPR1O75312 459 aa8.3□□□□□ -1.08
ITM2A-204ENST00000462038 ADH1BP00325 375 aa8.3□□□□□ -1.08
ITM2A-204ENST00000462038 RASA1P20936 1047 aa8.3□□□□□ -1.08
ITM2A-204ENST00000462038 NCOA4Q13772 614 aa8.3□□□□□ -1.08
ITM2A-204ENST00000462038 ZBTB33Q86T24 672 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms