RNA–Protein interactions for RNA: ENST00000461944.1

NGEF-208, Transcript of neuronal guanine nucleotide exchange factor, humanhuman

TSL 4

Gene NGEF, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGEF-208ENST00000461944 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.1■■□□□ 1.61
NGEF-208ENST00000461944 NPC1L1Q9UHC9 1359 aa25.09■■□□□ 1.61
NGEF-208ENST00000461944 BRINP3Q76B58 766 aa25.09■■□□□ 1.61
NGEF-208ENST00000461944 PSME1Q06323 249 aa25.08■■□□□ 1.61
NGEF-208ENST00000461944 AMER1Q5JTC6 1135 aaPredicted RBP25.08■■□□□ 1.61
NGEF-208ENST00000461944 NPHP3Q7Z494 1330 aa25.08■■□□□ 1.6
NGEF-208ENST00000461944 BRD4O60885 1362 aaPredicted RBP25.07■■□□□ 1.6
NGEF-208ENST00000461944 SSH2Q76I76 1423 aa25.06■■□□□ 1.6
NGEF-208ENST00000461944 FOXO3O43524 673 aa25.06■■□□□ 1.6
NGEF-208ENST00000461944 PXDNQ92626 1479 aa25.06■■□□□ 1.6
NGEF-208ENST00000461944 USP54Q70EL1 1684 aa25.06■■□□□ 1.6
NGEF-208ENST00000461944 TTC21BQ7Z4L5 1316 aa25.06■■□□□ 1.6
NGEF-208ENST00000461944 TTC21AQ8NDW8 1320 aa25.06■■□□□ 1.6
NGEF-208ENST00000461944 ALS2Q96Q42 1657 aa25.04■■□□□ 1.6
NGEF-208ENST00000461944 TOM1O60784 492 aa25.04■■□□□ 1.6
NGEF-208ENST00000461944 PAK3O75914 559 aaPredicted RBP25.04■■□□□ 1.6
NGEF-208ENST00000461944 XPCQ01831 940 aaPredicted RBP25.04■■□□□ 1.6
NGEF-208ENST00000461944 AHDC1Q5TGY3 1603 aaPredicted RBP25.04■■□□□ 1.6
NGEF-208ENST00000461944 PARD3Q8TEW0 1356 aa25.04■■□□□ 1.6
NGEF-208ENST00000461944 MARF1Q9Y4F3 1742 aaKnown RBP25.03■■□□□ 1.6
NGEF-208ENST00000461944 UBAP1LF5GYI3 381 aa25.02■■□□□ 1.6
NGEF-208ENST00000461944 NME9Q86XW9 330 aa25.02■■□□□ 1.6
NGEF-208ENST00000461944 PRKRIP1Q9H875 184 aaPredicted RBP25.02■■□□□ 1.6
NGEF-208ENST00000461944 PHLPP1O60346 1717 aa25.02■■□□□ 1.6
NGEF-208ENST00000461944 GGNBP2Q9H3C7 697 aa25.01■■□□□ 1.59
NGEF-208ENST00000461944 SCAF1Q9H7N4 1312 aaKnown RBP25.01■■□□□ 1.59
NGEF-208ENST00000461944 RALBP1Q15311 655 aa25■■□□□ 1.59
NGEF-208ENST00000461944 KRT28Q7Z3Y7 464 aa25■■□□□ 1.59
NGEF-208ENST00000461944 DDX17Q92841 729 aaKnown RBP25■■□□□ 1.59
NGEF-208ENST00000461944 TNS3Q68CZ2 1445 aa25■■□□□ 1.59
NGEF-208ENST00000461944 OVOS2A0A0J9YW53 1432 aa24.99■■□□□ 1.59
NGEF-208ENST00000461944 OVOS2Q6IE36 1432 aa24.99■■□□□ 1.59
NGEF-208ENST00000461944 MORC1Q86VD1 984 aa24.99■■□□□ 1.59
NGEF-208ENST00000461944 FYB1O15117 783 aa24.98■■□□□ 1.59
NGEF-208ENST00000461944 PIP4K2BP78356 416 aa24.98■■□□□ 1.59
NGEF-208ENST00000461944 MIER1Q8N108 512 aa24.98■■□□□ 1.59
NGEF-208ENST00000461944 SBNO1A3KN83 1393 aa24.97■■□□□ 1.59
NGEF-208ENST00000461944 COG3Q96JB2 828 aa24.97■■□□□ 1.59
NGEF-208ENST00000461944 MYBBP1AQ9BQG0 1328 aaKnown RBP24.95■■□□□ 1.58
NGEF-208ENST00000461944 PHRF1Q9P1Y6 1649 aaKnown RBP24.95■■□□□ 1.58
NGEF-208ENST00000461944 LMOD2Q6P5Q4 547 aa24.95■■□□□ 1.58
NGEF-208ENST00000461944 ABTB2Q8N961 1025 aa24.95■■□□□ 1.58
NGEF-208ENST00000461944 ZRANB1Q9UGI0 708 aa24.93■■□□□ 1.58
NGEF-208ENST00000461944 COL16A1Q07092 1604 aaPredicted RBP24.93■■□□□ 1.58
NGEF-208ENST00000461944 MED1Q15648 1581 aaPredicted RBP24.93■■□□□ 1.58
NGEF-208ENST00000461944 USP31Q70CQ4 1352 aa24.93■■□□□ 1.58
NGEF-208ENST00000461944 TNNT2P45379 298 aaPredicted RBP24.92■■□□□ 1.58
NGEF-208ENST00000461944 ABCA3Q99758 1704 aa24.92■■□□□ 1.58
NGEF-208ENST00000461944 CRYBG1Q9Y4K1 1723 aa24.92■■□□□ 1.58
NGEF-208ENST00000461944 SOS2Q07890 1332 aaPredicted RBP24.91■■□□□ 1.58
NGEF-208ENST00000461944 NUTM2GQ5VZR2 741 aa24.91■■□□□ 1.58
NGEF-208ENST00000461944 ARHGEF10O15013 1369 aa24.91■■□□□ 1.58
NGEF-208ENST00000461944 NLRP6P59044 892 aa24.9■■□□□ 1.58
NGEF-208ENST00000461944 SLIT3O75094 1523 aa24.89■■□□□ 1.57
NGEF-208ENST00000461944 LTN1O94822 1766 aa24.89■■□□□ 1.57
NGEF-208ENST00000461944 MAP2P11137 1827 aaKnown RBP24.89■■□□□ 1.57
NGEF-208ENST00000461944 SPATA31A3Q5VYP0 1347 aa24.87■■□□□ 1.57
NGEF-208ENST00000461944 PPP2R1AP30153 589 aa24.86■■□□□ 1.57
NGEF-208ENST00000461944 NLRP13Q86W25 1043 aa24.86■■□□□ 1.57
NGEF-208ENST00000461944 SOX12O15370 315 aa24.85■■□□□ 1.57
NGEF-208ENST00000461944 PLEKHG5O94827 1062 aa24.85■■□□□ 1.57
NGEF-208ENST00000461944 NFAT5O94916 1531 aa24.85■■□□□ 1.57
NGEF-208ENST00000461944 COL22A1Q8NFW1 1626 aaPredicted RBP24.84■■□□□ 1.57
NGEF-208ENST00000461944 CCER2I3L3R5 266 aa24.83■■□□□ 1.57
NGEF-208ENST00000461944 AATKQ6ZMQ8 1374 aa24.82■■□□□ 1.56
NGEF-208ENST00000461944 SMG6Q86US8 1419 aaKnown RBP24.82■■□□□ 1.56
NGEF-208ENST00000461944 USP19O94966 1318 aa24.82■■□□□ 1.56
NGEF-208ENST00000461944 HSPA1LP34931 641 aa24.81■■□□□ 1.56
NGEF-208ENST00000461944 MRS2Q9HD23 443 aa24.81■■□□□ 1.56
NGEF-208ENST00000461944 SHPRHQ149N8 1683 aa24.81■■□□□ 1.56
NGEF-208ENST00000461944 CDK12Q9NYV4 1490 aaPredicted RBP24.8■■□□□ 1.56
NGEF-208ENST00000461944 PEAK1Q9H792 1746 aa24.8■■□□□ 1.56
NGEF-208ENST00000461944 KCNH5Q8NCM2 988 aa24.78■■□□□ 1.56
NGEF-208ENST00000461944 LRRC59Q96AG4 307 aaKnown RBP24.78■■□□□ 1.56
NGEF-208ENST00000461944 HAP1P54257 671 aaPredicted RBP24.76■■□□□ 1.55
NGEF-208ENST00000461944 RRS1Q15050 365 aaKnown RBP24.76■■□□□ 1.55
NGEF-208ENST00000461944 PPM1GO15355 546 aaPredicted RBP24.75■■□□□ 1.55
NGEF-208ENST00000461944 CFAP53Q96M91 514 aa24.75■■□□□ 1.55
NGEF-208ENST00000461944 PNPLA6Q8IY17 1366 aa24.75■■□□□ 1.55
NGEF-208ENST00000461944 FBLN1P23142 703 aa24.74■■□□□ 1.55
NGEF-208ENST00000461944 MTHFSP49914 203 aa24.74■■□□□ 1.55
NGEF-208ENST00000461944 EMILIN1Q9Y6C2 1016 aa24.74■■□□□ 1.55
NGEF-208ENST00000461944 ZBTB7CA1YPR0 619 aa24.73■■□□□ 1.55
NGEF-208ENST00000461944 COL3A1P02461 1466 aaPredicted RBP24.72■■□□□ 1.55
NGEF-208ENST00000461944 RTL1A6NKG5 1358 aa24.72■■□□□ 1.55
NGEF-208ENST00000461944 GCP02774 474 aa24.72■■□□□ 1.55
NGEF-208ENST00000461944 CCDC184Q52MB2 194 aa24.72■■□□□ 1.55
NGEF-208ENST00000461944 CABLES1Q8TDN4 633 aa24.72■■□□□ 1.55
NGEF-208ENST00000461944 POLKQ9UBT6 870 aa24.72■■□□□ 1.55
NGEF-208ENST00000461944 FLT4P35916 1363 aa24.71■■□□□ 1.55
NGEF-208ENST00000461944 MAP3K19Q56UN5 1328 aa24.71■■□□□ 1.55
NGEF-208ENST00000461944 KIF24Q5T7B8 1368 aa24.69■■□□□ 1.54
NGEF-208ENST00000461944 AMPHP49418 695 aa24.69■■□□□ 1.54
NGEF-208ENST00000461944 ABCC6O95255 1503 aa24.69■■□□□ 1.54
NGEF-208ENST00000461944 JCADQ9P266 1359 aa24.67■■□□□ 1.54
NGEF-208ENST00000461944 RGPD5Q99666 1765 aa24.66■■□□□ 1.54
NGEF-208ENST00000461944 ZC3H6P61129 1189 aaKnown RBP24.64■■□□□ 1.54
NGEF-208ENST00000461944 WDR43Q15061 677 aaKnown RBP eCLIP24.64■■□□□ 1.54
NGEF-208ENST00000461944 COL14A1Q05707 1796 aaKnown RBP24.64■■□□□ 1.53
NGEF-208ENST00000461944 CPDO75976 1380 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms