RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 NUDT16Q96DE0 195 aaKnown RBP9.02□□□□□ -0.97
MSH2-204ENST00000461394 GGNBP2Q9H3C7 697 aa9.02□□□□□ -0.97
MSH2-204ENST00000461394 ADAMTS8Q9UP79 889 aa9.02□□□□□ -0.97
MSH2-204ENST00000461394 ADGRB2O60241 1585 aa9.02□□□□□ -0.97
MSH2-204ENST00000461394 NUTM2FA1L443 756 aa9.01□□□□□ -0.97
MSH2-204ENST00000461394 ECM2O94769 699 aaPredicted RBP9.01□□□□□ -0.97
MSH2-204ENST00000461394 CDC42BPGQ6DT37 1551 aa9.01□□□□□ -0.97
MSH2-204ENST00000461394 MON2Q7Z3U7 1717 aa9.01□□□□□ -0.97
MSH2-204ENST00000461394 SMG6Q86US8 1419 aaKnown RBP9.01□□□□□ -0.97
MSH2-204ENST00000461394 CCDC146Q8IYE0 955 aa9.01□□□□□ -0.97
MSH2-204ENST00000461394 PTPRUQ92729 1446 aa9.01□□□□□ -0.97
MSH2-204ENST00000461394 NUDCQ9Y266 331 aa9.01□□□□□ -0.97
MSH2-204ENST00000461394 MED14O60244 1454 aa9.01□□□□□ -0.97
MSH2-204ENST00000461394 INSRP06213 1382 aa9□□□□□ -0.97
MSH2-204ENST00000461394 XRN1Q8IZH2 1706 aaKnown RBP9□□□□□ -0.97
MSH2-204ENST00000461394 IRX6P78412 446 aaPredicted RBP9□□□□□ -0.97
MSH2-204ENST00000461394 PELP1Q8IZL8 1130 aaKnown RBP9□□□□□ -0.97
MSH2-204ENST00000461394 SPRYD3Q8NCJ5 442 aa9□□□□□ -0.97
MSH2-204ENST00000461394 SPOCK2Q92563 424 aa9□□□□□ -0.97
MSH2-204ENST00000461394 CD163L1Q9NR16 1453 aa9□□□□□ -0.97
MSH2-204ENST00000461394 SHPRHQ149N8 1683 aa9□□□□□ -0.97
MSH2-204ENST00000461394 POLR3AO14802 1390 aaPredicted RBP8.99□□□□□ -0.97
MSH2-204ENST00000461394 CHD2O14647 1828 aaKnown RBP8.99□□□□□ -0.97
MSH2-204ENST00000461394 MTHFSP49914 203 aa8.99□□□□□ -0.97
MSH2-204ENST00000461394 CCDC61Q9Y6R9 512 aa8.99□□□□□ -0.97
MSH2-204ENST00000461394 TOPAZ1Q8N9V7 1692 aa8.99□□□□□ -0.97
MSH2-204ENST00000461394 RGPD8O14715 1765 aaPredicted RBP8.99□□□□□ -0.97
MSH2-204ENST00000461394 PTCH1Q13635 1447 aa8.98□□□□□ -0.97
MSH2-204ENST00000461394 EDC4Q6P2E9 1401 aaKnown RBP8.98□□□□□ -0.97
MSH2-204ENST00000461394 PDE3BQ13370 1112 aa8.98□□□□□ -0.97
MSH2-204ENST00000461394 KLHL34Q8N239 644 aa8.98□□□□□ -0.97
MSH2-204ENST00000461394 MAP2P11137 1827 aaKnown RBP8.98□□□□□ -0.97
MSH2-204ENST00000461394 U2SURPO15042 1029 aaKnown RBP8.97□□□□□ -0.97
MSH2-204ENST00000461394 FYB1O15117 783 aa8.97□□□□□ -0.97
MSH2-204ENST00000461394 PPM1GO15355 546 aaPredicted RBP8.97□□□□□ -0.97
MSH2-204ENST00000461394 C14orf37Q86TY3 774 aa8.97□□□□□ -0.97
MSH2-204ENST00000461394 NCKAP5LQ9HCH0 1330 aa8.97□□□□□ -0.97
MSH2-204ENST00000461394 PIK3R4Q99570 1358 aa8.97□□□□□ -0.97
MSH2-204ENST00000461394 NPHP4O75161 1426 aaPredicted RBP8.97□□□□□ -0.97
MSH2-204ENST00000461394 U2AF1L5P0DN76 240 aaPredicted RBP8.96□□□□□ -0.98
MSH2-204ENST00000461394 KCNA6P17658 529 aa8.96□□□□□ -0.98
MSH2-204ENST00000461394 U2AF1Q01081 240 aaKnown RBP eCLIP8.96□□□□□ -0.98
MSH2-204ENST00000461394 COG3Q96JB2 828 aa8.96□□□□□ -0.98
MSH2-204ENST00000461394 ZNF692Q9BU19 519 aaPredicted RBP8.96□□□□□ -0.98
MSH2-204ENST00000461394 PRR36Q9H6K5 1346 aa8.96□□□□□ -0.98
MSH2-204ENST00000461394 FMN2Q9NZ56 1722 aa8.96□□□□□ -0.98
MSH2-204ENST00000461394 NALCNQ8IZF0 1738 aa8.95□□□□□ -0.98
MSH2-204ENST00000461394 NBR1Q14596 966 aa8.95□□□□□ -0.98
MSH2-204ENST00000461394 ERICH6Q7L0X2 663 aa8.95□□□□□ -0.98
MSH2-204ENST00000461394 NME9Q86XW9 330 aa8.95□□□□□ -0.98
MSH2-204ENST00000461394 NGDNQ8NEJ9 315 aaKnown RBP8.95□□□□□ -0.98
MSH2-204ENST00000461394 CPSF1Q10570 1443 aaKnown RBP8.95□□□□□ -0.98
MSH2-204ENST00000461394 APAF1O14727 1248 aa8.94□□□□□ -0.98
MSH2-204ENST00000461394 PMFBP1Q8TBY8 1022 aa8.94□□□□□ -0.98
MSH2-204ENST00000461394 RUNDC1Q96C34 613 aa8.94□□□□□ -0.98
MSH2-204ENST00000461394 ACEP12821 1306 aa8.94□□□□□ -0.98
MSH2-204ENST00000461394 NRKQ7Z2Y5 1582 aa8.94□□□□□ -0.98
MSH2-204ENST00000461394 DIAPH1O60610 1272 aaKnown RBP8.93□□□□□ -0.98
MSH2-204ENST00000461394 NEFMP07197 916 aa8.93□□□□□ -0.98
MSH2-204ENST00000461394 GOLGA2Q08379 1002 aa8.93□□□□□ -0.98
MSH2-204ENST00000461394 NEUROD2Q15784 382 aa8.93□□□□□ -0.98
MSH2-204ENST00000461394 CDCA7LQ96GN5 454 aa8.93□□□□□ -0.98
MSH2-204ENST00000461394 MAPK8IP3Q9UPT6 1336 aa8.93□□□□□ -0.98
MSH2-204ENST00000461394 NKTRP30414 1462 aaKnown RBP8.93□□□□□ -0.98
MSH2-204ENST00000461394 PLEKHG3A1L390 1219 aa8.92□□□□□ -0.98
MSH2-204ENST00000461394 PNNQ9H307 717 aaKnown RBP8.92□□□□□ -0.98
MSH2-204ENST00000461394 TSHZ2Q9NRE2 1034 aa8.92□□□□□ -0.98
MSH2-204ENST00000461394 ZRANB1Q9UGI0 708 aa8.92□□□□□ -0.98
MSH2-204ENST00000461394 RCAN3Q9UKA8 241 aa8.92□□□□□ -0.98
MSH2-204ENST00000461394 USP6P35125 1406 aa8.91□□□□□ -0.98
MSH2-204ENST00000461394 ANKARQ7Z5J8 1434 aa8.91□□□□□ -0.98
MSH2-204ENST00000461394 TTC21BQ7Z4L5 1316 aa8.91□□□□□ -0.98
MSH2-204ENST00000461394 SOX12O15370 315 aa8.91□□□□□ -0.98
MSH2-204ENST00000461394 NGEFQ8N5V2 710 aa8.91□□□□□ -0.98
MSH2-204ENST00000461394 RBM33Q96EV2 1170 aaKnown RBP8.91□□□□□ -0.98
MSH2-204ENST00000461394 RRP7AQ9Y3A4 280 aaKnown RBP8.91□□□□□ -0.98
MSH2-204ENST00000461394 PAK3O75914 559 aaPredicted RBP8.9□□□□□ -0.98
MSH2-204ENST00000461394 ERICH6BQ5W0A0 696 aa8.9□□□□□ -0.98
MSH2-204ENST00000461394 PROSER2Q86WR7 435 aaPredicted RBP8.9□□□□□ -0.98
MSH2-204ENST00000461394 COL3A1P02461 1466 aaPredicted RBP8.89□□□□□ -0.99
MSH2-204ENST00000461394 TTC21AQ8NDW8 1320 aa8.89□□□□□ -0.99
MSH2-204ENST00000461394 TULP1O00294 542 aaPredicted RBP8.89□□□□□ -0.99
MSH2-204ENST00000461394 FBLN1P23142 703 aa8.89□□□□□ -0.99
MSH2-204ENST00000461394 TCP11L2Q8N4U5 519 aa8.89□□□□□ -0.99
MSH2-204ENST00000461394 ARXQ96QS3 562 aa8.89□□□□□ -0.99
MSH2-204ENST00000461394 PPP4R2Q9NY27 417 aa8.89□□□□□ -0.99
MSH2-204ENST00000461394 POLKQ9UBT6 870 aa8.89□□□□□ -0.99
MSH2-204ENST00000461394 EMILIN1Q9Y6C2 1016 aa8.89□□□□□ -0.99
MSH2-204ENST00000461394 NWD1Q149M9 1564 aa8.89□□□□□ -0.99
MSH2-204ENST00000461394 CDK12Q9NYV4 1490 aaPredicted RBP8.89□□□□□ -0.99
MSH2-204ENST00000461394 ADGRL3Q9HAR2 1447 aa8.88□□□□□ -0.99
MSH2-204ENST00000461394 E9PSI1 815 aa8.88□□□□□ -0.99
MSH2-204ENST00000461394 RRP1P56182 461 aaKnown RBP8.88□□□□□ -0.99
MSH2-204ENST00000461394 RRS1Q15050 365 aaKnown RBP8.88□□□□□ -0.99
MSH2-204ENST00000461394 IQSEC2Q5JU85 1478 aa8.88□□□□□ -0.99
MSH2-204ENST00000461394 AATKQ6ZMQ8 1374 aa8.87□□□□□ -0.99
MSH2-204ENST00000461394 HSPA2P54652 639 aa8.87□□□□□ -0.99
MSH2-204ENST00000461394 SLFN5Q08AF3 891 aa8.87□□□□□ -0.99
MSH2-204ENST00000461394 ESCO1Q5FWF5 840 aa8.87□□□□□ -0.99
MSH2-204ENST00000461394 PHF8Q9UPP1 1060 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms