RNA–Protein interactions for RNA: ENST00000461259.5

CCDC146-204, Transcript of coiled-coil domain containing 146, humanhuman

TSL 1 (best)

Gene CCDC146, Length 1,554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146-204ENST00000461259 TCOF1Q13428 1488 aaKnown RBP7.41□□□□□ -1.22
CCDC146-204ENST00000461259 ROCK1Q13464 1354 aa7.41□□□□□ -1.22
CCDC146-204ENST00000461259 DNAJB2P25686 324 aa7.41□□□□□ -1.22
CCDC146-204ENST00000461259 MLLT3P42568 568 aaPredicted RBP7.41□□□□□ -1.22
CCDC146-204ENST00000461259 ANKLE1Q8NAG6 615 aa7.41□□□□□ -1.22
CCDC146-204ENST00000461259 WDR62O43379 1518 aa7.4□□□□□ -1.22
CCDC146-204ENST00000461259 MAGI1Q96QZ7 1491 aaPredicted RBP7.4□□□□□ -1.22
CCDC146-204ENST00000461259 PPEF1O14829 653 aaPredicted RBP7.4□□□□□ -1.22
CCDC146-204ENST00000461259 S1PR4O95977 384 aa7.4□□□□□ -1.22
CCDC146-204ENST00000461259 TSPY4P0CV99 314 aa7.4□□□□□ -1.22
CCDC146-204ENST00000461259 TSPY10P0CW01 314 aa7.4□□□□□ -1.22
CCDC146-204ENST00000461259 RSPH4AQ5TD94 716 aa7.4□□□□□ -1.22
CCDC146-204ENST00000461259 ZNF598Q86UK7 904 aaKnown RBP7.4□□□□□ -1.22
CCDC146-204ENST00000461259 TMEM134Q9H6X4 195 aa7.4□□□□□ -1.22
CCDC146-204ENST00000461259 ADAMTS12P58397 1594 aa7.4□□□□□ -1.23
CCDC146-204ENST00000461259 PTPN23Q9H3S7 1636 aa7.39□□□□□ -1.23
CCDC146-204ENST00000461259 ARID3CA6NKF2 412 aa7.39□□□□□ -1.23
CCDC146-204ENST00000461259 PTGDRQ13258 359 aa7.39□□□□□ -1.23
CCDC146-204ENST00000461259 LIAT1Q6ZQX7 453 aa7.39□□□□□ -1.23
CCDC146-204ENST00000461259 ARID3AQ99856 593 aa7.39□□□□□ -1.23
CCDC146-204ENST00000461259 ADGRG1Q9Y653 693 aa7.39□□□□□ -1.23
CCDC146-204ENST00000461259 PTPRKQ15262 1439 aa7.39□□□□□ -1.23
CCDC146-204ENST00000461259 ARHGEF11O15085 1522 aa7.38□□□□□ -1.23
CCDC146-204ENST00000461259 POTECB2RU33 542 aa7.38□□□□□ -1.23
CCDC146-204ENST00000461259 ACTN4O43707 911 aaKnown RBP7.38□□□□□ -1.23
CCDC146-204ENST00000461259 NEFLP07196 543 aa7.38□□□□□ -1.23
CCDC146-204ENST00000461259 PDIA4P13667 645 aaKnown RBP7.38□□□□□ -1.23
CCDC146-204ENST00000461259 SYNJ2O15056 1496 aa7.38□□□□□ -1.23
CCDC146-204ENST00000461259 GRIN2AQ12879 1464 aa7.38□□□□□ -1.23
CCDC146-204ENST00000461259 PBRM1Q86U86 1689 aa7.38□□□□□ -1.23
CCDC146-204ENST00000461259 ZNF608Q9ULD9 1512 aaPredicted RBP7.38□□□□□ -1.23
CCDC146-204ENST00000461259 CFHP08603 1231 aa7.37□□□□□ -1.23
CCDC146-204ENST00000461259 ZNF697Q5TEC3 545 aa7.37□□□□□ -1.23
CCDC146-204ENST00000461259 RBM46Q8TBY0 533 aaKnown RBP7.37□□□□□ -1.23
CCDC146-204ENST00000461259 KMT5BQ4FZB7 885 aa7.37□□□□□ -1.23
CCDC146-204ENST00000461259 ZNF777Q9ULD5 760 aaPredicted RBP7.37□□□□□ -1.23
CCDC146-204ENST00000461259 TROQ12816 1431 aaPredicted RBP7.36□□□□□ -1.23
CCDC146-204ENST00000461259 RCCD1A6NED2 376 aa7.36□□□□□ -1.23
CCDC146-204ENST00000461259 TNFRSF10AO00220 468 aa7.36□□□□□ -1.23
CCDC146-204ENST00000461259 GDF9O60383 454 aa7.36□□□□□ -1.23
CCDC146-204ENST00000461259 ADH1BP00325 375 aa7.36□□□□□ -1.23
CCDC146-204ENST00000461259 FAM161AQ3B820 660 aa7.36□□□□□ -1.23
CCDC146-204ENST00000461259 LCE2AQ5TA79 106 aaPredicted RBP7.36□□□□□ -1.23
CCDC146-204ENST00000461259 ANKRD30AQ9BXX3 1397 aa7.36□□□□□ -1.23
CCDC146-204ENST00000461259 FAM187AA6NFU0 413 aa7.35□□□□□ -1.23
CCDC146-204ENST00000461259 PLA2G2CQ5R387 149 aa7.35□□□□□ -1.23
CCDC146-204ENST00000461259 DAPK1P53355 1430 aa7.34□□□□□ -1.23
CCDC146-204ENST00000461259 DISP1Q96F81 1524 aa7.34□□□□□ -1.23
CCDC146-204ENST00000461259 EIF5BO60841 1220 aaKnown RBP7.34□□□□□ -1.23
CCDC146-204ENST00000461259 SLC10A3P09131 477 aa7.34□□□□□ -1.23
CCDC146-204ENST00000461259 L3MBTL2Q969R5 705 aa7.34□□□□□ -1.23
CCDC146-204ENST00000461259 HIRIP3Q9BW71 556 aaPredicted RBP7.34□□□□□ -1.23
CCDC146-204ENST00000461259 TREML4Q6UXN2 200 aa7.33□□□□□ -1.24
CCDC146-204ENST00000461259 ARHGEF1Q92888 912 aaKnown RBP7.33□□□□□ -1.24
CCDC146-204ENST00000461259 ABCC5O15440 1437 aa7.33□□□□□ -1.24
CCDC146-204ENST00000461259 KIAA0556O60303 1618 aa7.33□□□□□ -1.24
CCDC146-204ENST00000461259 NR1I2O75469 434 aa7.33□□□□□ -1.24
CCDC146-204ENST00000461259 HSPA5P11021 654 aaKnown RBP7.33□□□□□ -1.24
CCDC146-204ENST00000461259 CDK13Q14004 1512 aaKnown RBP7.32□□□□□ -1.24
CCDC146-204ENST00000461259 NUP153P49790 1475 aaKnown RBP7.32□□□□□ -1.24
CCDC146-204ENST00000461259 ST8SIA5O15466 376 aa7.32□□□□□ -1.24
CCDC146-204ENST00000461259 KCNV2Q8TDN2 545 aa7.32□□□□□ -1.24
CCDC146-204ENST00000461259 SLC6A16Q9GZN6 736 aa7.32□□□□□ -1.24
CCDC146-204ENST00000461259 STK17AQ9UEE5 414 aa7.32□□□□□ -1.24
CCDC146-204ENST00000461259 RAPGEF6Q8TEU7 1601 aa7.32□□□□□ -1.24
CCDC146-204ENST00000461259 MAGI3Q5TCQ9 1506 aa7.32□□□□□ -1.24
CCDC146-204ENST00000461259 PTPRGP23470 1445 aa7.32□□□□□ -1.24
CCDC146-204ENST00000461259 ZNF644Q9H582 1327 aaPredicted RBP7.31□□□□□ -1.24
CCDC146-204ENST00000461259 ANKRD30BQ9BXX2 1392 aa7.31□□□□□ -1.24
CCDC146-204ENST00000461259 AAASQ9NRG9 546 aa7.31□□□□□ -1.24
CCDC146-204ENST00000461259 NUP160Q12769 1436 aa7.31□□□□□ -1.24
CCDC146-204ENST00000461259 PRG4Q92954 1404 aaPredicted RBP7.31□□□□□ -1.24
CCDC146-204ENST00000461259 ARID4BQ4LE39 1312 aaPredicted RBP7.31□□□□□ -1.24
CCDC146-204ENST00000461259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.3□□□□□ -1.24
CCDC146-204ENST00000461259 NUTM2FA1L443 756 aa7.3□□□□□ -1.24
CCDC146-204ENST00000461259 SUPT16HQ9Y5B9 1047 aaKnown RBP7.3□□□□□ -1.24
CCDC146-204ENST00000461259 EIF4G3O43432 1585 aaKnown RBP7.3□□□□□ -1.24
CCDC146-204ENST00000461259 NCOA1Q15788 1441 aa7.29□□□□□ -1.24
CCDC146-204ENST00000461259 ZC3H15Q8WU90 426 aaKnown RBP7.29□□□□□ -1.24
CCDC146-204ENST00000461259 SLC24A3Q9HC58 644 aa7.29□□□□□ -1.24
CCDC146-204ENST00000461259 PKD2L1Q9P0L9 805 aa7.29□□□□□ -1.24
CCDC146-204ENST00000461259 GPATCH8Q9UKJ3 1502 aaKnown RBP7.29□□□□□ -1.24
CCDC146-204ENST00000461259 HMGB1P09429 215 aaKnown RBP7.29□□□□□ -1.24
CCDC146-204ENST00000461259 SCUBE3Q8IX30 993 aa7.29□□□□□ -1.24
CCDC146-204ENST00000461259 C1orf115Q9H7X2 142 aa7.29□□□□□ -1.24
CCDC146-204ENST00000461259 RPRD2Q5VT52 1461 aaKnown RBP7.28□□□□□ -1.24
CCDC146-204ENST00000461259 PUS10Q3MIT2 529 aaKnown RBP7.28□□□□□ -1.24
CCDC146-204ENST00000461259 PLB1Q6P1J6 1458 aa7.28□□□□□ -1.24
CCDC146-204ENST00000461259 LRRIQ1Q96JM4 1722 aa7.28□□□□□ -1.24
CCDC146-204ENST00000461259 NUP155O75694 1391 aa7.27□□□□□ -1.25
CCDC146-204ENST00000461259 ANKRD50Q9ULJ7 1429 aa7.27□□□□□ -1.25
CCDC146-204ENST00000461259 KIAA1107Q9UPP5 1409 aa7.27□□□□□ -1.25
CCDC146-204ENST00000461259 GCC2Q8IWJ2 1684 aa7.27□□□□□ -1.25
CCDC146-204ENST00000461259 FCHSD2O94868 740 aa7.27□□□□□ -1.25
CCDC146-204ENST00000461259 ERICH6BQ5W0A0 696 aa7.27□□□□□ -1.25
CCDC146-204ENST00000461259 PXYLP1Q8TE99 480 aa7.27□□□□□ -1.25
CCDC146-204ENST00000461259 WASHC2AQ641Q2 1341 aa7.27□□□□□ -1.25
CCDC146-204ENST00000461259 DNMT1P26358 1616 aaKnown RBP7.27□□□□□ -1.25
CCDC146-204ENST00000461259 FOXC1Q12948 553 aa7.26□□□□□ -1.25
CCDC146-204ENST00000461259 CRIPAKQ8N1N5 446 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms