RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TRPM3Q9HCF6 1732 aaPredicted RBP25.62■■□□□ 1.69
TOP3A-202ENST00000461127 THSD7AQ9UPZ6 1657 aa25.61■■□□□ 1.69
TOP3A-202ENST00000461127 FAM196AQ6ZSG2 479 aa25.61■■□□□ 1.69
TOP3A-202ENST00000461127 PRDM11Q9NQV5 511 aa25.61■■□□□ 1.69
TOP3A-202ENST00000461127 EIF3AQ14152 1382 aaKnown RBP25.6■■□□□ 1.69
TOP3A-202ENST00000461127 ALS2Q96Q42 1657 aa25.6■■□□□ 1.69
TOP3A-202ENST00000461127 PARD3Q8TEW0 1356 aa25.59■■□□□ 1.69
TOP3A-202ENST00000461127 TRIM37O94972 964 aa25.59■■□□□ 1.69
TOP3A-202ENST00000461127 CAMKK2Q96RR4 588 aa25.59■■□□□ 1.69
TOP3A-202ENST00000461127 ACIN1Q9UKV3 1341 aaKnown RBP25.59■■□□□ 1.69
TOP3A-202ENST00000461127 DLC1Q96QB1 1528 aa25.58■■□□□ 1.69
TOP3A-202ENST00000461127 YY1P25490 414 aa25.58■■□□□ 1.69
TOP3A-202ENST00000461127 PAK3O75914 559 aaPredicted RBP25.56■■□□□ 1.68
TOP3A-202ENST00000461127 APBA3O96018 575 aa25.56■■□□□ 1.68
TOP3A-202ENST00000461127 NGDNQ8NEJ9 315 aaKnown RBP25.55■■□□□ 1.68
TOP3A-202ENST00000461127 SPATA31A1Q5TZJ5 1347 aa25.55■■□□□ 1.68
TOP3A-202ENST00000461127 HIRIP3Q9BW71 556 aaPredicted RBP25.54■■□□□ 1.68
TOP3A-202ENST00000461127 DCAF8L1A6NGE4 600 aa25.52■■□□□ 1.68
TOP3A-202ENST00000461127 NBPF8Q3BBV2 869 aa25.52■■□□□ 1.68
TOP3A-202ENST00000461127 NBPF14Q5TI25 921 aa25.52■■□□□ 1.68
TOP3A-202ENST00000461127 STRN4Q9NRL3 753 aa25.51■■□□□ 1.67
TOP3A-202ENST00000461127 MINK1Q8N4C8 1332 aaPredicted RBP25.5■■□□□ 1.67
TOP3A-202ENST00000461127 TULP4Q9NRJ4 1543 aa25.5■■□□□ 1.67
TOP3A-202ENST00000461127 TRAK1Q9UPV9 953 aa25.5■■□□□ 1.67
TOP3A-202ENST00000461127 CRYBG1Q9Y4K1 1723 aa25.5■■□□□ 1.67
TOP3A-202ENST00000461127 KIAA0232Q92628 1395 aa25.49■■□□□ 1.67
TOP3A-202ENST00000461127 PRR36Q9H6K5 1346 aa25.49■■□□□ 1.67
TOP3A-202ENST00000461127 PDE3BQ13370 1112 aa25.49■■□□□ 1.67
TOP3A-202ENST00000461127 WASLO00401 505 aaPredicted RBP25.48■■□□□ 1.67
TOP3A-202ENST00000461127 PPP1R1BQ9UD71 204 aaPredicted RBP25.48■■□□□ 1.67
TOP3A-202ENST00000461127 CHRNA2Q15822 529 aa25.47■■□□□ 1.67
TOP3A-202ENST00000461127 USP35Q9P2H5 1018 aa25.46■■□□□ 1.67
TOP3A-202ENST00000461127 EVA1CP58658 441 aa25.45■■□□□ 1.66
TOP3A-202ENST00000461127 SPON1Q9HCB6 807 aa25.45■■□□□ 1.66
TOP3A-202ENST00000461127 RREB1Q92766 1687 aa25.45■■□□□ 1.66
TOP3A-202ENST00000461127 BARGINQ6ZT62 677 aa25.44■■□□□ 1.66
TOP3A-202ENST00000461127 ADGRB1O14514 1584 aa25.43■■□□□ 1.66
TOP3A-202ENST00000461127 ZC3H6P61129 1189 aaKnown RBP25.42■■□□□ 1.66
TOP3A-202ENST00000461127 NUP188Q5SRE5 1749 aa25.42■■□□□ 1.66
TOP3A-202ENST00000461127 ATP7BP35670 1465 aa25.4■■□□□ 1.66
TOP3A-202ENST00000461127 ITSN1Q15811 1721 aa25.4■■□□□ 1.66
TOP3A-202ENST00000461127 SSH2Q76I76 1423 aa25.39■■□□□ 1.66
TOP3A-202ENST00000461127 PHRF1Q9P1Y6 1649 aaKnown RBP25.39■■□□□ 1.66
TOP3A-202ENST00000461127 KCNQ2O43526 872 aa25.39■■□□□ 1.66
TOP3A-202ENST00000461127 NINLQ9Y2I6 1382 aa25.39■■□□□ 1.65
TOP3A-202ENST00000461127 C11orf95C9JLR9 678 aaPredicted RBP25.37■■□□□ 1.65
TOP3A-202ENST00000461127 TCP11L2Q8N4U5 519 aa25.37■■□□□ 1.65
TOP3A-202ENST00000461127 NUTM2GQ5VZR2 741 aa25.36■■□□□ 1.65
TOP3A-202ENST00000461127 NUDT16Q96DE0 195 aaKnown RBP25.36■■□□□ 1.65
TOP3A-202ENST00000461127 LARP1Q6PKG0 1096 aaKnown RBP25.34■■□□□ 1.65
TOP3A-202ENST00000461127 THRAP3Q9Y2W1 955 aaKnown RBP25.34■■□□□ 1.65
TOP3A-202ENST00000461127 KDM2AQ9Y2K7 1162 aa25.32■■□□□ 1.64
TOP3A-202ENST00000461127 CAMTA1Q9Y6Y1 1673 aa25.29■■□□□ 1.64
TOP3A-202ENST00000461127 ABTB2Q8N961 1025 aa25.29■■□□□ 1.64
TOP3A-202ENST00000461127 DCAF11Q8TEB1 546 aa25.29■■□□□ 1.64
TOP3A-202ENST00000461127 STAC3Q96MF2 364 aa25.29■■□□□ 1.64
TOP3A-202ENST00000461127 CPDO75976 1380 aa25.29■■□□□ 1.64
TOP3A-202ENST00000461127 ACEP12821 1306 aa25.28■■□□□ 1.64
TOP3A-202ENST00000461127 POLR3AO14802 1390 aaPredicted RBP25.28■■□□□ 1.64
TOP3A-202ENST00000461127 NRKQ7Z2Y5 1582 aa25.27■■□□□ 1.64
TOP3A-202ENST00000461127 CDK19Q9BWU1 502 aa25.26■■□□□ 1.63
TOP3A-202ENST00000461127 CCDC61Q9Y6R9 512 aa25.26■■□□□ 1.63
TOP3A-202ENST00000461127 PARP4Q9UKK3 1724 aaKnown RBP25.26■■□□□ 1.63
TOP3A-202ENST00000461127 OVOS2A0A0G2JMS6 1433 aa25.25■■□□□ 1.63
TOP3A-202ENST00000461127 OVOS2A0A0J9YW53 1432 aa25.25■■□□□ 1.63
TOP3A-202ENST00000461127 OVOS2Q6IE36 1432 aa25.25■■□□□ 1.63
TOP3A-202ENST00000461127 ARHGEF28Q8N1W1 1705 aaKnown RBP25.24■■□□□ 1.63
TOP3A-202ENST00000461127 LMO7Q8WWI1 1683 aa25.24■■□□□ 1.63
TOP3A-202ENST00000461127 PLSCR1O15162 318 aa25.24■■□□□ 1.63
TOP3A-202ENST00000461127 USP19O94966 1318 aa25.23■■□□□ 1.63
TOP3A-202ENST00000461127 NLRP13Q86W25 1043 aa25.23■■□□□ 1.63
TOP3A-202ENST00000461127 RGPD3A6NKT7 1758 aaPredicted RBP25.23■■□□□ 1.63
TOP3A-202ENST00000461127 RGPD4Q7Z3J3 1758 aa25.23■■□□□ 1.63
TOP3A-202ENST00000461127 PLEKHG3A1L390 1219 aa25.21■■□□□ 1.63
TOP3A-202ENST00000461127 CRB1P82279 1406 aa25.2■■□□□ 1.63
TOP3A-202ENST00000461127 GCP02774 474 aa25.2■■□□□ 1.62
TOP3A-202ENST00000461127 COL5A2P05997 1499 aaPredicted RBP25.2■■□□□ 1.62
TOP3A-202ENST00000461127 TOPAZ1Q8N9V7 1692 aa25.2■■□□□ 1.62
TOP3A-202ENST00000461127 DDB1Q16531 1140 aa25.18■■□□□ 1.62
TOP3A-202ENST00000461127 BCL11BQ9C0K0 894 aaPredicted RBP25.18■■□□□ 1.62
TOP3A-202ENST00000461127 ANO8Q9HCE9 1232 aaPredicted RBP25.17■■□□□ 1.62
TOP3A-202ENST00000461127 PEAK1Q9H792 1746 aa25.16■■□□□ 1.62
TOP3A-202ENST00000461127 SBF2Q86WG5 1849 aa25.16■■□□□ 1.62
TOP3A-202ENST00000461127 CASZ1Q86V15 1759 aa25.16■■□□□ 1.62
TOP3A-202ENST00000461127 ZBTB7CA1YPR0 619 aa25.15■■□□□ 1.62
TOP3A-202ENST00000461127 ZBTB7AO95365 584 aa25.14■■□□□ 1.62
TOP3A-202ENST00000461127 ZNF784Q8NCA9 323 aaPredicted RBP25.14■■□□□ 1.62
TOP3A-202ENST00000461127 TOM1L2Q6ZVM7 507 aa25.13■■□□□ 1.61
TOP3A-202ENST00000461127 BRD4O60885 1362 aaPredicted RBP25.12■■□□□ 1.61
TOP3A-202ENST00000461127 LRRC37A3O60309 1634 aa25.12■■□□□ 1.61
TOP3A-202ENST00000461127 AATKQ6ZMQ8 1374 aa25.11■■□□□ 1.61
TOP3A-202ENST00000461127 RAB3GAP2Q9H2M9 1393 aa25.11■■□□□ 1.61
TOP3A-202ENST00000461127 STK32BQ9NY57 414 aa25.1■■□□□ 1.61
TOP3A-202ENST00000461127 PTGER2P43116 358 aa25.09■■□□□ 1.61
TOP3A-202ENST00000461127 SRPK2P78362 688 aaKnown RBP25.09■■□□□ 1.61
TOP3A-202ENST00000461127 CDCA7Q9BWT1 371 aaPredicted RBP25.09■■□□□ 1.61
TOP3A-202ENST00000461127 PDGFDQ9GZP0 370 aaPredicted RBP25.09■■□□□ 1.61
TOP3A-202ENST00000461127 ATF5Q9Y2D1 282 aaPredicted RBP25.09■■□□□ 1.61
TOP3A-202ENST00000461127 MYOM1P52179 1685 aa25.09■■□□□ 1.61
TOP3A-202ENST00000461127 PPIP5K1Q6PFW1 1433 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms