RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 PHF8Q9UPP1 1060 aa21.27■■□□□ 1
PCYT1A-212ENST00000460677 ZNF335Q9H4Z2 1342 aaPredicted RBP21.25■□□□□ 0.99
PCYT1A-212ENST00000460677 HNRNPUQ00839 825 aaKnown RBP eCLIP21.25■□□□□ 0.99
PCYT1A-212ENST00000460677 TTC21AQ8NDW8 1320 aa21.25■□□□□ 0.99
PCYT1A-212ENST00000460677 SCAF1Q9H7N4 1312 aaKnown RBP21.25■□□□□ 0.99
PCYT1A-212ENST00000460677 INSRP06213 1382 aa21.24■□□□□ 0.99
PCYT1A-212ENST00000460677 ATF3P18847 181 aa21.23■□□□□ 0.99
PCYT1A-212ENST00000460677 MTHFSP49914 203 aa21.23■□□□□ 0.99
PCYT1A-212ENST00000460677 ESCO1Q5FWF5 840 aa21.23■□□□□ 0.99
PCYT1A-212ENST00000460677 COG3Q96JB2 828 aa21.23■□□□□ 0.99
PCYT1A-212ENST00000460677 LRRC7Q96NW7 1537 aa21.23■□□□□ 0.99
PCYT1A-212ENST00000460677 MSH6P52701 1360 aa21.22■□□□□ 0.99
PCYT1A-212ENST00000460677 C1orf167Q5SNV9 1468 aa21.22■□□□□ 0.99
PCYT1A-212ENST00000460677 WDR43Q15061 677 aaKnown RBP eCLIP21.21■□□□□ 0.99
PCYT1A-212ENST00000460677 CADPS2Q86UW7 1296 aa21.21■□□□□ 0.99
PCYT1A-212ENST00000460677 CFAP53Q96M91 514 aa21.21■□□□□ 0.99
PCYT1A-212ENST00000460677 ZRANB1Q9UGI0 708 aa21.21■□□□□ 0.99
PCYT1A-212ENST00000460677 XIRP1Q702N8 1843 aaKnown RBP21.2■□□□□ 0.98
PCYT1A-212ENST00000460677 MST1RQ04912 1400 aa21.19■□□□□ 0.98
PCYT1A-212ENST00000460677 ORAI2Q96SN7 254 aa21.19■□□□□ 0.98
PCYT1A-212ENST00000460677 OVOS2A0A0J9YW53 1432 aa21.18■□□□□ 0.98
PCYT1A-212ENST00000460677 OVOS2Q6IE36 1432 aa21.18■□□□□ 0.98
PCYT1A-212ENST00000460677 AATKQ6ZMQ8 1374 aa21.18■□□□□ 0.98
PCYT1A-212ENST00000460677 ADAMTS8Q9UP79 889 aa21.17■□□□□ 0.98
PCYT1A-212ENST00000460677 USP31Q70CQ4 1352 aa21.17■□□□□ 0.98
PCYT1A-212ENST00000460677 KIF1AQ12756 1690 aa21.17■□□□□ 0.98
PCYT1A-212ENST00000460677 BLMP54132 1417 aaPredicted RBP21.16■□□□□ 0.98
PCYT1A-212ENST00000460677 PSME1Q06323 249 aa21.15■□□□□ 0.98
PCYT1A-212ENST00000460677 POLKQ9UBT6 870 aa21.15■□□□□ 0.98
PCYT1A-212ENST00000460677 ZBED9Q6R2W3 1325 aa21.15■□□□□ 0.98
PCYT1A-212ENST00000460677 PIK3C2AO00443 1686 aa21.13■□□□□ 0.97
PCYT1A-212ENST00000460677 SHPRHQ149N8 1683 aa21.13■□□□□ 0.97
PCYT1A-212ENST00000460677 PNPLA6Q8IY17 1366 aa21.13■□□□□ 0.97
PCYT1A-212ENST00000460677 SMG6Q86US8 1419 aaKnown RBP21.12■□□□□ 0.97
PCYT1A-212ENST00000460677 FOXO3O43524 673 aa21.11■□□□□ 0.97
PCYT1A-212ENST00000460677 PAK3O75914 559 aaPredicted RBP21.11■□□□□ 0.97
PCYT1A-212ENST00000460677 FBLN1P23142 703 aa21.11■□□□□ 0.97
PCYT1A-212ENST00000460677 COL3A1P02461 1466 aaPredicted RBP21.11■□□□□ 0.97
PCYT1A-212ENST00000460677 MAP2P11137 1827 aaKnown RBP21.11■□□□□ 0.97
PCYT1A-212ENST00000460677 USP54Q70EL1 1684 aa21.11■□□□□ 0.97
PCYT1A-212ENST00000460677 NLRP6P59044 892 aa21.1■□□□□ 0.97
PCYT1A-212ENST00000460677 ABTB2Q8N961 1025 aa21.1■□□□□ 0.97
PCYT1A-212ENST00000460677 EMILIN1Q9Y6C2 1016 aa21.09■□□□□ 0.97
PCYT1A-212ENST00000460677 CDK12Q9NYV4 1490 aaPredicted RBP21.08■□□□□ 0.97
PCYT1A-212ENST00000460677 NUDCQ9Y266 331 aa21.08■□□□□ 0.96
PCYT1A-212ENST00000460677 PPM1GO15355 546 aaPredicted RBP21.07■□□□□ 0.96
PCYT1A-212ENST00000460677 DIAPH1O60610 1272 aaKnown RBP21.07■□□□□ 0.96
PCYT1A-212ENST00000460677 RRS1Q15050 365 aaKnown RBP21.07■□□□□ 0.96
PCYT1A-212ENST00000460677 KRT28Q7Z3Y7 464 aa21.07■□□□□ 0.96
PCYT1A-212ENST00000460677 MARF1Q9Y4F3 1742 aaKnown RBP21.05■□□□□ 0.96
PCYT1A-212ENST00000460677 TRPM3Q9HCF6 1732 aaPredicted RBP21.05■□□□□ 0.96
PCYT1A-212ENST00000460677 NPHP3Q7Z494 1330 aa21.04■□□□□ 0.96
PCYT1A-212ENST00000460677 XPCQ01831 940 aaPredicted RBP21.04■□□□□ 0.96
PCYT1A-212ENST00000460677 NUTM2GQ5VZR2 741 aa21.04■□□□□ 0.96
PCYT1A-212ENST00000460677 SLAIN2Q9P270 581 aa21.04■□□□□ 0.96
PCYT1A-212ENST00000460677 U2AF1L5P0DN76 240 aaPredicted RBP21.02■□□□□ 0.96
PCYT1A-212ENST00000460677 U2AF1Q01081 240 aaKnown RBP eCLIP21.02■□□□□ 0.96
PCYT1A-212ENST00000460677 LTBP4Q8N2S1 1624 aa21.02■□□□□ 0.96
PCYT1A-212ENST00000460677 SENP3-EIF4A1A0A087X0R7 540 aa21.01■□□□□ 0.95
PCYT1A-212ENST00000460677 BRINP3Q76B58 766 aa21.01■□□□□ 0.95
PCYT1A-212ENST00000460677 CCDC146Q8IYE0 955 aa21.01■□□□□ 0.95
PCYT1A-212ENST00000460677 SBNO1A3KN83 1393 aa21.01■□□□□ 0.95
PCYT1A-212ENST00000460677 U2SURPO15042 1029 aaKnown RBP21■□□□□ 0.95
PCYT1A-212ENST00000460677 SOX12O15370 315 aa21■□□□□ 0.95
PCYT1A-212ENST00000460677 MAP3K19Q56UN5 1328 aa21■□□□□ 0.95
PCYT1A-212ENST00000460677 RUNDC1Q96C34 613 aa20.99■□□□□ 0.95
PCYT1A-212ENST00000460677 IL13P35225 146 aa20.98■□□□□ 0.95
PCYT1A-212ENST00000460677 PEAK1Q9H792 1746 aa20.98■□□□□ 0.95
PCYT1A-212ENST00000460677 PXDNQ92626 1479 aa20.98■□□□□ 0.95
PCYT1A-212ENST00000460677 KCNH5Q8NCM2 988 aa20.97■□□□□ 0.95
PCYT1A-212ENST00000460677 DDX17Q92841 729 aaKnown RBP20.97■□□□□ 0.95
PCYT1A-212ENST00000460677 KIF24Q5T7B8 1368 aa20.97■□□□□ 0.95
PCYT1A-212ENST00000460677 ALS2Q96Q42 1657 aa20.97■□□□□ 0.95
PCYT1A-212ENST00000460677 APAF1O14727 1248 aa20.97■□□□□ 0.95
PCYT1A-212ENST00000460677 NGEFQ8N5V2 710 aa20.97■□□□□ 0.95
PCYT1A-212ENST00000460677 SALL2Q9Y467 1007 aaPredicted RBP20.97■□□□□ 0.95
PCYT1A-212ENST00000460677 FLT4P35916 1363 aa20.96■□□□□ 0.95
PCYT1A-212ENST00000460677 LMOD2Q6P5Q4 547 aa20.96■□□□□ 0.95
PCYT1A-212ENST00000460677 AEBP2Q6ZN18 517 aaPredicted RBP20.96■□□□□ 0.95
PCYT1A-212ENST00000460677 PNNQ9H307 717 aaKnown RBP20.96■□□□□ 0.95
PCYT1A-212ENST00000460677 SLIT3O75094 1523 aa20.96■□□□□ 0.95
PCYT1A-212ENST00000460677 NFAT5O94916 1531 aa20.96■□□□□ 0.95
PCYT1A-212ENST00000460677 USP19O94966 1318 aa20.95■□□□□ 0.94
PCYT1A-212ENST00000460677 AMPHP49418 695 aa20.95■□□□□ 0.94
PCYT1A-212ENST00000460677 PDE3BQ13370 1112 aa20.95■□□□□ 0.94
PCYT1A-212ENST00000460677 TNS3Q68CZ2 1445 aa20.94■□□□□ 0.94
PCYT1A-212ENST00000460677 FCHSD2O94868 740 aa20.94■□□□□ 0.94
PCYT1A-212ENST00000460677 EIF4A2Q14240 407 aaKnown RBP20.93■□□□□ 0.94
PCYT1A-212ENST00000460677 HSP90AB2PQ58FF8 381 aa20.93■□□□□ 0.94
PCYT1A-212ENST00000460677 PLEKHF1Q96S99 279 aa20.93■□□□□ 0.94
PCYT1A-212ENST00000460677 SPATA31A3Q5VYP0 1347 aa20.92■□□□□ 0.94
PCYT1A-212ENST00000460677 IQSEC2Q5JU85 1478 aa20.92■□□□□ 0.94
PCYT1A-212ENST00000460677 RTL1A6NKG5 1358 aa20.92■□□□□ 0.94
PCYT1A-212ENST00000460677 GCP02774 474 aa20.92■□□□□ 0.94
PCYT1A-212ENST00000460677 SOS2Q07890 1332 aaPredicted RBP20.92■□□□□ 0.94
PCYT1A-212ENST00000460677 HOXC9P31274 260 aa20.91■□□□□ 0.94
PCYT1A-212ENST00000460677 TCP11L2Q8N4U5 519 aa20.91■□□□□ 0.94
PCYT1A-212ENST00000460677 ARHGEF10O15013 1369 aa20.9■□□□□ 0.94
PCYT1A-212ENST00000460677 NCBP3Q53F19 620 aaKnown RBP20.9■□□□□ 0.94
PCYT1A-212ENST00000460677 ZNF521Q96K83 1311 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms