RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 LRRC7Q96NW7 1537 aa19.37■□□□□ 0.69
PCNP-202ENST00000460231 NGDNQ8NEJ9 315 aaKnown RBP19.37■□□□□ 0.69
PCNP-202ENST00000460231 ANKARQ7Z5J8 1434 aa19.36■□□□□ 0.69
PCNP-202ENST00000460231 MTHFSP49914 203 aa19.36■□□□□ 0.69
PCNP-202ENST00000460231 HNRNPUQ00839 825 aaKnown RBP eCLIP19.36■□□□□ 0.69
PCNP-202ENST00000460231 PHF23Q9BUL5 403 aaPredicted RBP19.36■□□□□ 0.69
PCNP-202ENST00000460231 NUTM2GQ5VZR2 741 aa19.36■□□□□ 0.69
PCNP-202ENST00000460231 C19orf44Q9H6X5 657 aa19.36■□□□□ 0.69
PCNP-202ENST00000460231 ANKRD26Q9UPS8 1709 aa19.35■□□□□ 0.69
PCNP-202ENST00000460231 PHF8Q9UPP1 1060 aa19.34■□□□□ 0.69
PCNP-202ENST00000460231 FOXO3O43524 673 aa19.33■□□□□ 0.69
PCNP-202ENST00000460231 ADAMTS8Q9UP79 889 aa19.33■□□□□ 0.69
PCNP-202ENST00000460231 C1orf167Q5SNV9 1468 aa19.33■□□□□ 0.68
PCNP-202ENST00000460231 NSD2O96028 1365 aa19.32■□□□□ 0.68
PCNP-202ENST00000460231 MST1RQ04912 1400 aa19.32■□□□□ 0.68
PCNP-202ENST00000460231 SOX12O15370 315 aa19.32■□□□□ 0.68
PCNP-202ENST00000460231 ZNF692Q9BU19 519 aaPredicted RBP19.32■□□□□ 0.68
PCNP-202ENST00000460231 PIK3C2AO00443 1686 aa19.31■□□□□ 0.68
PCNP-202ENST00000460231 RRS1Q15050 365 aaKnown RBP19.31■□□□□ 0.68
PCNP-202ENST00000460231 EMILIN1Q9Y6C2 1016 aa19.31■□□□□ 0.68
PCNP-202ENST00000460231 SHPRHQ149N8 1683 aa19.3■□□□□ 0.68
PCNP-202ENST00000460231 MARF1Q9Y4F3 1742 aaKnown RBP19.29■□□□□ 0.68
PCNP-202ENST00000460231 PLEKHG5O94827 1062 aa19.29■□□□□ 0.68
PCNP-202ENST00000460231 POLKQ9UBT6 870 aa19.29■□□□□ 0.68
PCNP-202ENST00000460231 SALL2Q9Y467 1007 aaPredicted RBP19.29■□□□□ 0.68
PCNP-202ENST00000460231 MAP2P11137 1827 aaKnown RBP19.29■□□□□ 0.68
PCNP-202ENST00000460231 OVOS2A0A0J9YW53 1432 aa19.28■□□□□ 0.68
PCNP-202ENST00000460231 OVOS2Q6IE36 1432 aa19.28■□□□□ 0.68
PCNP-202ENST00000460231 PAK3O75914 559 aaPredicted RBP19.28■□□□□ 0.68
PCNP-202ENST00000460231 PPM1GO15355 546 aaPredicted RBP19.27■□□□□ 0.68
PCNP-202ENST00000460231 ATF3P18847 181 aa19.27■□□□□ 0.68
PCNP-202ENST00000460231 CCDC146Q8IYE0 955 aa19.26■□□□□ 0.67
PCNP-202ENST00000460231 COG3Q96JB2 828 aa19.25■□□□□ 0.67
PCNP-202ENST00000460231 COL3A1P02461 1466 aaPredicted RBP19.25■□□□□ 0.67
PCNP-202ENST00000460231 MSH6P52701 1360 aa19.24■□□□□ 0.67
PCNP-202ENST00000460231 PSME1Q06323 249 aa19.23■□□□□ 0.67
PCNP-202ENST00000460231 ABTB2Q8N961 1025 aa19.22■□□□□ 0.67
PCNP-202ENST00000460231 NCOA3Q9Y6Q9 1424 aa19.22■□□□□ 0.67
PCNP-202ENST00000460231 PEAK1Q9H792 1746 aa19.22■□□□□ 0.67
PCNP-202ENST00000460231 NLRP6P59044 892 aa19.22■□□□□ 0.67
PCNP-202ENST00000460231 DCCP43146 1447 aa19.21■□□□□ 0.67
PCNP-202ENST00000460231 CENPBP07199 599 aaPredicted RBP19.21■□□□□ 0.67
PCNP-202ENST00000460231 BRINP3Q76B58 766 aa19.2■□□□□ 0.66
PCNP-202ENST00000460231 CADPS2Q86UW7 1296 aa19.2■□□□□ 0.66
PCNP-202ENST00000460231 LTBP4Q8N2S1 1624 aa19.2■□□□□ 0.66
PCNP-202ENST00000460231 BLMP54132 1417 aaPredicted RBP19.2■□□□□ 0.66
PCNP-202ENST00000460231 DMRT2Q9Y5R5 561 aa19.2■□□□□ 0.66
PCNP-202ENST00000460231 TRPM3Q9HCF6 1732 aaPredicted RBP19.19■□□□□ 0.66
PCNP-202ENST00000460231 TTC21AQ8NDW8 1320 aa19.19■□□□□ 0.66
PCNP-202ENST00000460231 USP31Q70CQ4 1352 aa19.19■□□□□ 0.66
PCNP-202ENST00000460231 PNPLA6Q8IY17 1366 aa19.19■□□□□ 0.66
PCNP-202ENST00000460231 WDR43Q15061 677 aaKnown RBP eCLIP19.19■□□□□ 0.66
PCNP-202ENST00000460231 KRT28Q7Z3Y7 464 aa19.18■□□□□ 0.66
PCNP-202ENST00000460231 SLAIN2Q9P270 581 aa19.17■□□□□ 0.66
PCNP-202ENST00000460231 LMOD2Q6P5Q4 547 aa19.17■□□□□ 0.66
PCNP-202ENST00000460231 HSP90AB2PQ58FF8 381 aa19.16■□□□□ 0.66
PCNP-202ENST00000460231 MAP3K19Q56UN5 1328 aa19.16■□□□□ 0.66
PCNP-202ENST00000460231 AATKQ6ZMQ8 1374 aa19.16■□□□□ 0.66
PCNP-202ENST00000460231 SCAF1Q9H7N4 1312 aaKnown RBP19.16■□□□□ 0.66
PCNP-202ENST00000460231 ZBED9Q6R2W3 1325 aa19.15■□□□□ 0.66
PCNP-202ENST00000460231 SMG6Q86US8 1419 aaKnown RBP19.15■□□□□ 0.66
PCNP-202ENST00000460231 U2SURPO15042 1029 aaKnown RBP19.15■□□□□ 0.66
PCNP-202ENST00000460231 APAF1O14727 1248 aa19.13■□□□□ 0.65
PCNP-202ENST00000460231 U2AF1L5P0DN76 240 aaPredicted RBP19.13■□□□□ 0.65
PCNP-202ENST00000460231 U2AF1Q01081 240 aaKnown RBP eCLIP19.13■□□□□ 0.65
PCNP-202ENST00000460231 KIF1AQ12756 1690 aa19.13■□□□□ 0.65
PCNP-202ENST00000460231 PXDNQ92626 1479 aa19.13■□□□□ 0.65
PCNP-202ENST00000460231 CABLES1Q8TDN4 633 aa19.13■□□□□ 0.65
PCNP-202ENST00000460231 IL13P35225 146 aa19.12■□□□□ 0.65
PCNP-202ENST00000460231 CDCA7LQ96GN5 454 aa19.12■□□□□ 0.65
PCNP-202ENST00000460231 RRP7AQ9Y3A4 280 aaKnown RBP19.12■□□□□ 0.65
PCNP-202ENST00000460231 DIAPH1O60610 1272 aaKnown RBP19.11■□□□□ 0.65
PCNP-202ENST00000460231 CFAP53Q96M91 514 aa19.11■□□□□ 0.65
PCNP-202ENST00000460231 CDK12Q9NYV4 1490 aaPredicted RBP19.11■□□□□ 0.65
PCNP-202ENST00000460231 ALS2Q96Q42 1657 aa19.11■□□□□ 0.65
PCNP-202ENST00000460231 HMOX1P09601 288 aa19.1■□□□□ 0.65
PCNP-202ENST00000460231 USP54Q70EL1 1684 aa19.1■□□□□ 0.65
PCNP-202ENST00000460231 NFAT5O94916 1531 aa19.1■□□□□ 0.65
PCNP-202ENST00000460231 MED1Q15648 1581 aaPredicted RBP19.1■□□□□ 0.65
PCNP-202ENST00000460231 INSRP06213 1382 aa19.1■□□□□ 0.65
PCNP-202ENST00000460231 EIF4A2Q14240 407 aaKnown RBP19.09■□□□□ 0.65
PCNP-202ENST00000460231 AEBP1Q8IUX7 1158 aa19.09■□□□□ 0.65
PCNP-202ENST00000460231 NEUROD2Q15784 382 aa19.08■□□□□ 0.65
PCNP-202ENST00000460231 PLEKHF1Q96S99 279 aa19.08■□□□□ 0.65
PCNP-202ENST00000460231 ZBTB7CA1YPR0 619 aa19.08■□□□□ 0.64
PCNP-202ENST00000460231 LTN1O94822 1766 aa19.07■□□□□ 0.64
PCNP-202ENST00000460231 GCP02774 474 aa19.06■□□□□ 0.64
PCNP-202ENST00000460231 SPINK5Q9NQ38 1064 aaPredicted RBP19.06■□□□□ 0.64
PCNP-202ENST00000460231 NPHP3Q7Z494 1330 aa19.06■□□□□ 0.64
PCNP-202ENST00000460231 IQSEC2Q5JU85 1478 aa19.05■□□□□ 0.64
PCNP-202ENST00000460231 PHACTR3Q96KR7 559 aa19.05■□□□□ 0.64
PCNP-202ENST00000460231 HOXC9P31274 260 aa19.05■□□□□ 0.64
PCNP-202ENST00000460231 TCP11L2Q8N4U5 519 aa19.05■□□□□ 0.64
PCNP-202ENST00000460231 ZC3H6P61129 1189 aaKnown RBP19.04■□□□□ 0.64
PCNP-202ENST00000460231 RSPH6AQ9H0K4 717 aa19.04■□□□□ 0.64
PCNP-202ENST00000460231 AXIN2Q9Y2T1 843 aa19.04■□□□□ 0.64
PCNP-202ENST00000460231 USP19O94966 1318 aa19.04■□□□□ 0.64
PCNP-202ENST00000460231 SPATA31A3Q5VYP0 1347 aa19.04■□□□□ 0.64
PCNP-202ENST00000460231 LTV1Q96GA3 475 aaPredicted RBP19.03■□□□□ 0.64
PCNP-202ENST00000460231 ZNF521Q96K83 1311 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms