RNA–Protein interactions for RNA: ENST00000460207.1

RUNX1-209, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-209ENST00000460207 ARHGEF28Q8N1W1 1705 aaKnown RBP23.73■■□□□ 1.39
RUNX1-209ENST00000460207 BRWD3Q6RI45 1802 aa23.73■■□□□ 1.39
RUNX1-209ENST00000460207 CCDC61Q9Y6R9 512 aa23.73■■□□□ 1.39
RUNX1-209ENST00000460207 ATP7BP35670 1465 aa23.72■■□□□ 1.39
RUNX1-209ENST00000460207 KIAA1210Q9ULL0 1709 aa23.71■■□□□ 1.39
RUNX1-209ENST00000460207 PLEKHG3A1L390 1219 aa23.71■■□□□ 1.39
RUNX1-209ENST00000460207 SF3B2Q13435 895 aaKnown RBP23.71■■□□□ 1.39
RUNX1-209ENST00000460207 COL14A1Q05707 1796 aaKnown RBP23.7■■□□□ 1.39
RUNX1-209ENST00000460207 ITSN1Q15811 1721 aa23.7■■□□□ 1.38
RUNX1-209ENST00000460207 POLR3AO14802 1390 aaPredicted RBP23.69■■□□□ 1.38
RUNX1-209ENST00000460207 NBPF8Q3BBV2 869 aa23.69■■□□□ 1.38
RUNX1-209ENST00000460207 PRDM11Q9NQV5 511 aa23.69■■□□□ 1.38
RUNX1-209ENST00000460207 SPATA31A5Q5VU36 1347 aa23.68■■□□□ 1.38
RUNX1-209ENST00000460207 SPATA31A7Q8IWB4 1347 aa23.68■■□□□ 1.38
RUNX1-209ENST00000460207 FAM98CQ17RN3 349 aaKnown RBP23.68■■□□□ 1.38
RUNX1-209ENST00000460207 NBPF1Q3BBV0 1214 aa23.68■■□□□ 1.38
RUNX1-209ENST00000460207 ACEP12821 1306 aa23.67■■□□□ 1.38
RUNX1-209ENST00000460207 NRAPQ86VF7 1730 aa23.67■■□□□ 1.38
RUNX1-209ENST00000460207 A0A0G2JS52 829 aa23.65■■□□□ 1.38
RUNX1-209ENST00000460207 MYT1Q01538 1121 aa23.65■■□□□ 1.38
RUNX1-209ENST00000460207 DEFB132Q7Z7B7 95 aa23.65■■□□□ 1.38
RUNX1-209ENST00000460207 CRYBG1Q9Y4K1 1723 aa23.64■■□□□ 1.37
RUNX1-209ENST00000460207 KIAA0232Q92628 1395 aa23.63■■□□□ 1.37
RUNX1-209ENST00000460207 CENPJQ9HC77 1338 aaPredicted RBP23.61■■□□□ 1.37
RUNX1-209ENST00000460207 ABTB2Q8N961 1025 aa23.6■■□□□ 1.37
RUNX1-209ENST00000460207 SPATA31A1Q5TZJ5 1347 aa23.59■■□□□ 1.37
RUNX1-209ENST00000460207 BAG6P46379 1132 aa23.59■■□□□ 1.37
RUNX1-209ENST00000460207 ZC3H6P61129 1189 aaKnown RBP23.59■■□□□ 1.37
RUNX1-209ENST00000460207 TOPAZ1Q8N9V7 1692 aa23.58■■□□□ 1.37
RUNX1-209ENST00000460207 BRD4O60885 1362 aaPredicted RBP23.58■■□□□ 1.37
RUNX1-209ENST00000460207 SRPK2P78362 688 aaKnown RBP23.58■■□□□ 1.37
RUNX1-209ENST00000460207 CHRNA2Q15822 529 aa23.58■■□□□ 1.37
RUNX1-209ENST00000460207 NUTM2GQ5VZR2 741 aa23.58■■□□□ 1.37
RUNX1-209ENST00000460207 L3MBTL2Q969R5 705 aa23.57■■□□□ 1.36
RUNX1-209ENST00000460207 NLRP13Q86W25 1043 aa23.56■■□□□ 1.36
RUNX1-209ENST00000460207 EVA1CP58658 441 aa23.55■■□□□ 1.36
RUNX1-209ENST00000460207 CPDO75976 1380 aa23.54■■□□□ 1.36
RUNX1-209ENST00000460207 CABP2Q9NPB3 220 aa23.54■■□□□ 1.36
RUNX1-209ENST00000460207 STRN4Q9NRL3 753 aa23.54■■□□□ 1.36
RUNX1-209ENST00000460207 USP19O94966 1318 aa23.54■■□□□ 1.36
RUNX1-209ENST00000460207 PPIP5K1Q6PFW1 1433 aa23.53■■□□□ 1.36
RUNX1-209ENST00000460207 PHRF1Q9P1Y6 1649 aaKnown RBP23.53■■□□□ 1.36
RUNX1-209ENST00000460207 BARGINQ6ZT62 677 aa23.53■■□□□ 1.36
RUNX1-209ENST00000460207 THSD7AQ9UPZ6 1657 aa23.52■■□□□ 1.36
RUNX1-209ENST00000460207 GCP02774 474 aa23.52■■□□□ 1.36
RUNX1-209ENST00000460207 FAM196AQ6ZSG2 479 aa23.52■■□□□ 1.36
RUNX1-209ENST00000460207 FAM182BQ5T319 152 aa23.5■■□□□ 1.35
RUNX1-209ENST00000460207 CABP1Q9NZU7 370 aa23.5■■□□□ 1.35
RUNX1-209ENST00000460207 SSH2Q76I76 1423 aa23.49■■□□□ 1.35
RUNX1-209ENST00000460207 THRAP3Q9Y2W1 955 aaKnown RBP23.48■■□□□ 1.35
RUNX1-209ENST00000460207 EVC2Q86UK5 1308 aa23.48■■□□□ 1.35
RUNX1-209ENST00000460207 CAMTA1Q9Y6Y1 1673 aa23.48■■□□□ 1.35
RUNX1-209ENST00000460207 EN1Q05925 392 aaPredicted RBP23.47■■□□□ 1.35
RUNX1-209ENST00000460207 SIN3AQ96ST3 1273 aa23.47■■□□□ 1.35
RUNX1-209ENST00000460207 DISP2A7MBM2 1401 aa23.47■■□□□ 1.35
RUNX1-209ENST00000460207 RGPD1P0DJD0 1748 aa23.46■■□□□ 1.35
RUNX1-209ENST00000460207 LARP1Q6PKG0 1096 aaKnown RBP23.46■■□□□ 1.35
RUNX1-209ENST00000460207 TCP11L2Q8N4U5 519 aa23.46■■□□□ 1.35
RUNX1-209ENST00000460207 USP35Q9P2H5 1018 aa23.46■■□□□ 1.35
RUNX1-209ENST00000460207 NRKQ7Z2Y5 1582 aa23.45■■□□□ 1.34
RUNX1-209ENST00000460207 NLRP6P59044 892 aa23.45■■□□□ 1.34
RUNX1-209ENST00000460207 PDE3BQ13370 1112 aa23.45■■□□□ 1.34
RUNX1-209ENST00000460207 QRICH2Q9H0J4 1663 aa23.44■■□□□ 1.34
RUNX1-209ENST00000460207 USP6P35125 1406 aa23.44■■□□□ 1.34
RUNX1-209ENST00000460207 ZNF692Q9BU19 519 aaPredicted RBP23.44■■□□□ 1.34
RUNX1-209ENST00000460207 LMO7Q8WWI1 1683 aa23.42■■□□□ 1.34
RUNX1-209ENST00000460207 TRIM37O94972 964 aa23.42■■□□□ 1.34
RUNX1-209ENST00000460207 NEUROD1Q13562 356 aa23.42■■□□□ 1.34
RUNX1-209ENST00000460207 CAMKK2Q96RR4 588 aa23.41■■□□□ 1.34
RUNX1-209ENST00000460207 ROCK2O75116 1388 aaKnown RBP23.4■■□□□ 1.34
RUNX1-209ENST00000460207 AATKQ6ZMQ8 1374 aa23.4■■□□□ 1.34
RUNX1-209ENST00000460207 C11orf95C9JLR9 678 aaPredicted RBP23.4■■□□□ 1.34
RUNX1-209ENST00000460207 TRPM1Q7Z4N2 1603 aa23.4■■□□□ 1.34
RUNX1-209ENST00000460207 PARD3Q8TEW0 1356 aa23.4■■□□□ 1.34
RUNX1-209ENST00000460207 PSDA5PKW4 1024 aaPredicted RBP23.39■■□□□ 1.33
RUNX1-209ENST00000460207 COL5A2P05997 1499 aaPredicted RBP23.37■■□□□ 1.33
RUNX1-209ENST00000460207 APBA3O96018 575 aa23.37■■□□□ 1.33
RUNX1-209ENST00000460207 EZH2Q15910 746 aaKnown RBP23.37■■□□□ 1.33
RUNX1-209ENST00000460207 CRB1P82279 1406 aa23.36■■□□□ 1.33
RUNX1-209ENST00000460207 LRP5O75197 1615 aa23.36■■□□□ 1.33
RUNX1-209ENST00000460207 TNS1Q9HBL0 1735 aaKnown RBP23.36■■□□□ 1.33
RUNX1-209ENST00000460207 SLIT3O75094 1523 aa23.35■■□□□ 1.33
RUNX1-209ENST00000460207 TTC21BQ7Z4L5 1316 aa23.34■■□□□ 1.33
RUNX1-209ENST00000460207 TTC21AQ8NDW8 1320 aa23.34■■□□□ 1.33
RUNX1-209ENST00000460207 KCNH5Q8NCM2 988 aa23.34■■□□□ 1.33
RUNX1-209ENST00000460207 R3HDM1Q15032 1099 aaKnown RBP23.33■■□□□ 1.33
RUNX1-209ENST00000460207 ARHGEF25Q86VW2 580 aa23.33■■□□□ 1.33
RUNX1-209ENST00000460207 CPSF1Q10570 1443 aaKnown RBP23.32■■□□□ 1.32
RUNX1-209ENST00000460207 SBNO2Q9Y2G9 1366 aa23.31■■□□□ 1.32
RUNX1-209ENST00000460207 ZBTB7CA1YPR0 619 aa23.31■■□□□ 1.32
RUNX1-209ENST00000460207 TOM1L2Q6ZVM7 507 aa23.3■■□□□ 1.32
RUNX1-209ENST00000460207 CDCA7Q9BWT1 371 aaPredicted RBP23.3■■□□□ 1.32
RUNX1-209ENST00000460207 AXIN2Q9Y2T1 843 aa23.3■■□□□ 1.32
RUNX1-209ENST00000460207 PIK3C2AO00443 1686 aa23.29■■□□□ 1.32
RUNX1-209ENST00000460207 PARP4Q9UKK3 1724 aaKnown RBP23.29■■□□□ 1.32
RUNX1-209ENST00000460207 WDR17Q8IZU2 1322 aa23.29■■□□□ 1.32
RUNX1-209ENST00000460207 COL18A1P39060 1754 aa23.28■■□□□ 1.32
RUNX1-209ENST00000460207 DDB1Q16531 1140 aa23.27■■□□□ 1.32
RUNX1-209ENST00000460207 KTN1Q86UP2 1357 aaKnown RBP23.27■■□□□ 1.31
RUNX1-209ENST00000460207 NBPF14Q5TI25 921 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms