RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 SPATA31A5Q5VU36 1347 aa18.01■□□□□ 0.47
GPNMB-204ENST00000459927 SPATA31A7Q8IWB4 1347 aa18.01■□□□□ 0.47
GPNMB-204ENST00000459927 ADGRB2O60241 1585 aa18.01■□□□□ 0.47
GPNMB-204ENST00000459927 PLCH1Q4KWH8 1693 aa18■□□□□ 0.47
GPNMB-204ENST00000459927 NBPF8Q3BBV2 869 aa18■□□□□ 0.47
GPNMB-204ENST00000459927 TRPM3Q9HCF6 1732 aaPredicted RBP18■□□□□ 0.47
GPNMB-204ENST00000459927 BAG6P46379 1132 aa17.99■□□□□ 0.47
GPNMB-204ENST00000459927 FAM182BQ5T319 152 aa17.99■□□□□ 0.47
GPNMB-204ENST00000459927 PRDM11Q9NQV5 511 aa17.99■□□□□ 0.47
GPNMB-204ENST00000459927 TULP4Q9NRJ4 1543 aa17.98■□□□□ 0.47
GPNMB-204ENST00000459927 CCDC61Q9Y6R9 512 aa17.98■□□□□ 0.47
GPNMB-204ENST00000459927 ALS2Q96Q42 1657 aa17.97■□□□□ 0.47
GPNMB-204ENST00000459927 PLEKHG3A1L390 1219 aa17.97■□□□□ 0.47
GPNMB-204ENST00000459927 ZC3H6P61129 1189 aaKnown RBP17.97■□□□□ 0.47
GPNMB-204ENST00000459927 EN1Q05925 392 aaPredicted RBP17.97■□□□□ 0.47
GPNMB-204ENST00000459927 NUTM2GQ5VZR2 741 aa17.97■□□□□ 0.47
GPNMB-204ENST00000459927 ABCA3Q99758 1704 aa17.97■□□□□ 0.47
GPNMB-204ENST00000459927 CHRNA2Q15822 529 aa17.96■□□□□ 0.47
GPNMB-204ENST00000459927 ACEP12821 1306 aa17.96■□□□□ 0.46
GPNMB-204ENST00000459927 COL14A1Q05707 1796 aaKnown RBP17.95■□□□□ 0.46
GPNMB-204ENST00000459927 NBPF1Q3BBV0 1214 aa17.95■□□□□ 0.46
GPNMB-204ENST00000459927 SPATA31A1Q5TZJ5 1347 aa17.95■□□□□ 0.46
GPNMB-204ENST00000459927 EVA1CP58658 441 aa17.94■□□□□ 0.46
GPNMB-204ENST00000459927 KIAA0232Q92628 1395 aa17.93■□□□□ 0.46
GPNMB-204ENST00000459927 PSDA5PKW4 1024 aaPredicted RBP17.93■□□□□ 0.46
GPNMB-204ENST00000459927 STRN4Q9NRL3 753 aa17.93■□□□□ 0.46
GPNMB-204ENST00000459927 NRAPQ86VF7 1730 aa17.92■□□□□ 0.46
GPNMB-204ENST00000459927 ABTB2Q8N961 1025 aa17.92■□□□□ 0.46
GPNMB-204ENST00000459927 POLR3AO14802 1390 aaPredicted RBP17.91■□□□□ 0.46
GPNMB-204ENST00000459927 FAM196AQ6ZSG2 479 aa17.91■□□□□ 0.46
GPNMB-204ENST00000459927 ATP7BP35670 1465 aa17.89■□□□□ 0.45
GPNMB-204ENST00000459927 TRIM37O94972 964 aa17.89■□□□□ 0.45
GPNMB-204ENST00000459927 EZH2Q15910 746 aaKnown RBP17.89■□□□□ 0.45
GPNMB-204ENST00000459927 CAMKK2Q96RR4 588 aa17.89■□□□□ 0.45
GPNMB-204ENST00000459927 USP35Q9P2H5 1018 aa17.89■□□□□ 0.45
GPNMB-204ENST00000459927 BARGINQ6ZT62 677 aa17.88■□□□□ 0.45
GPNMB-204ENST00000459927 NLRP13Q86W25 1043 aa17.88■□□□□ 0.45
GPNMB-204ENST00000459927 ARHGEF28Q8N1W1 1705 aaKnown RBP17.87■□□□□ 0.45
GPNMB-204ENST00000459927 GCP02774 474 aa17.87■□□□□ 0.45
GPNMB-204ENST00000459927 SRPK2P78362 688 aaKnown RBP17.87■□□□□ 0.45
GPNMB-204ENST00000459927 PDE3BQ13370 1112 aa17.87■□□□□ 0.45
GPNMB-204ENST00000459927 LARP1Q6PKG0 1096 aaKnown RBP17.87■□□□□ 0.45
GPNMB-204ENST00000459927 CABP2Q9NPB3 220 aa17.87■□□□□ 0.45
GPNMB-204ENST00000459927 CRYBG1Q9Y4K1 1723 aa17.86■□□□□ 0.45
GPNMB-204ENST00000459927 APBA3O96018 575 aa17.86■□□□□ 0.45
GPNMB-204ENST00000459927 R3HDM1Q15032 1099 aaKnown RBP17.86■□□□□ 0.45
GPNMB-204ENST00000459927 TCP11L2Q8N4U5 519 aa17.84■□□□□ 0.45
GPNMB-204ENST00000459927 CABP1Q9NZU7 370 aa17.84■□□□□ 0.45
GPNMB-204ENST00000459927 ITSN1Q15811 1721 aa17.84■□□□□ 0.45
GPNMB-204ENST00000459927 CENPJQ9HC77 1338 aaPredicted RBP17.83■□□□□ 0.44
GPNMB-204ENST00000459927 THSD7AQ9UPZ6 1657 aa17.83■□□□□ 0.44
GPNMB-204ENST00000459927 DISP2A7MBM2 1401 aa17.82■□□□□ 0.44
GPNMB-204ENST00000459927 CPDO75976 1380 aa17.82■□□□□ 0.44
GPNMB-204ENST00000459927 THRAP3Q9Y2W1 955 aaKnown RBP17.82■□□□□ 0.44
GPNMB-204ENST00000459927 CAMTA1Q9Y6Y1 1673 aa17.82■□□□□ 0.44
GPNMB-204ENST00000459927 USP19O94966 1318 aa17.81■□□□□ 0.44
GPNMB-204ENST00000459927 RGPD1P0DJD0 1748 aa17.81■□□□□ 0.44
GPNMB-204ENST00000459927 KIAA1210Q9ULL0 1709 aa17.81■□□□□ 0.44
GPNMB-204ENST00000459927 SSH2Q76I76 1423 aa17.81■□□□□ 0.44
GPNMB-204ENST00000459927 NLRP6P59044 892 aa17.8■□□□□ 0.44
GPNMB-204ENST00000459927 L3MBTL2Q969R5 705 aa17.8■□□□□ 0.44
GPNMB-204ENST00000459927 PPIP5K1Q6PFW1 1433 aa17.79■□□□□ 0.44
GPNMB-204ENST00000459927 BRD4O60885 1362 aaPredicted RBP17.79■□□□□ 0.44
GPNMB-204ENST00000459927 PHRF1Q9P1Y6 1649 aaKnown RBP17.78■□□□□ 0.44
GPNMB-204ENST00000459927 LRP5O75197 1615 aa17.77■□□□□ 0.44
GPNMB-204ENST00000459927 NBPF14Q5TI25 921 aa17.76■□□□□ 0.43
GPNMB-204ENST00000459927 SIN3AQ96ST3 1273 aa17.76■□□□□ 0.43
GPNMB-204ENST00000459927 ZNF692Q9BU19 519 aaPredicted RBP17.76■□□□□ 0.43
GPNMB-204ENST00000459927 TOPAZ1Q8N9V7 1692 aa17.76■□□□□ 0.43
GPNMB-204ENST00000459927 ZBTB7CA1YPR0 619 aa17.75■□□□□ 0.43
GPNMB-204ENST00000459927 C11orf95C9JLR9 678 aaPredicted RBP17.75■□□□□ 0.43
GPNMB-204ENST00000459927 PARD3Q8TEW0 1356 aa17.75■□□□□ 0.43
GPNMB-204ENST00000459927 AXIN2Q9Y2T1 843 aa17.74■□□□□ 0.43
GPNMB-204ENST00000459927 EVC2Q86UK5 1308 aa17.73■□□□□ 0.43
GPNMB-204ENST00000459927 TNS1Q9HBL0 1735 aaKnown RBP17.73■□□□□ 0.43
GPNMB-204ENST00000459927 AATKQ6ZMQ8 1374 aa17.73■□□□□ 0.43
GPNMB-204ENST00000459927 LMO7Q8WWI1 1683 aa17.71■□□□□ 0.43
GPNMB-204ENST00000459927 NRKQ7Z2Y5 1582 aa17.71■□□□□ 0.43
GPNMB-204ENST00000459927 NEUROD1Q13562 356 aa17.71■□□□□ 0.43
GPNMB-204ENST00000459927 TOM1L2Q6ZVM7 507 aa17.71■□□□□ 0.43
GPNMB-204ENST00000459927 USP6P35125 1406 aa17.71■□□□□ 0.43
GPNMB-204ENST00000459927 CRB1P82279 1406 aa17.71■□□□□ 0.43
GPNMB-204ENST00000459927 COL5A2P05997 1499 aaPredicted RBP17.7■□□□□ 0.42
GPNMB-204ENST00000459927 PLSCR1O15162 318 aa17.7■□□□□ 0.42
GPNMB-204ENST00000459927 DDB1Q16531 1140 aa17.7■□□□□ 0.42
GPNMB-204ENST00000459927 ARHGEF25Q86VW2 580 aa17.7■□□□□ 0.42
GPNMB-204ENST00000459927 TTC21BQ7Z4L5 1316 aa17.7■□□□□ 0.42
GPNMB-204ENST00000459927 KCNH5Q8NCM2 988 aa17.68■□□□□ 0.42
GPNMB-204ENST00000459927 BCL11BQ9C0K0 894 aaPredicted RBP17.67■□□□□ 0.42
GPNMB-204ENST00000459927 PTF1AQ7RTS3 328 aa17.66■□□□□ 0.42
GPNMB-204ENST00000459927 MARCH10Q8NA82 808 aaPredicted RBP17.66■□□□□ 0.42
GPNMB-204ENST00000459927 CDCA7Q9BWT1 371 aaPredicted RBP17.66■□□□□ 0.42
GPNMB-204ENST00000459927 WDR17Q8IZU2 1322 aa17.66■□□□□ 0.42
GPNMB-204ENST00000459927 KCNQ2O43526 872 aa17.65■□□□□ 0.42
GPNMB-204ENST00000459927 PROM2Q8N271 834 aa17.65■□□□□ 0.42
GPNMB-204ENST00000459927 CARD10Q9BWT7 1032 aa17.65■□□□□ 0.42
GPNMB-204ENST00000459927 EXOC5O00471 708 aa17.64■□□□□ 0.41
GPNMB-204ENST00000459927 SPON1Q9HCB6 807 aa17.64■□□□□ 0.41
GPNMB-204ENST00000459927 TTC21AQ8NDW8 1320 aa17.64■□□□□ 0.41
GPNMB-204ENST00000459927 QRICH2Q9H0J4 1663 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms