RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 GPRASP1Q5JY77 1395 aa11.72□□□□□ -0.53
HPS4-207ENST00000459918 HRCP23327 699 aa11.72□□□□□ -0.53
HPS4-207ENST00000459918 EN1Q05925 392 aaPredicted RBP11.72□□□□□ -0.53
HPS4-207ENST00000459918 R3HDM1Q15032 1099 aaKnown RBP11.72□□□□□ -0.53
HPS4-207ENST00000459918 FAM182BQ5T319 152 aa11.72□□□□□ -0.53
HPS4-207ENST00000459918 FAM83GA6ND36 823 aa11.71□□□□□ -0.53
HPS4-207ENST00000459918 PAK3O75914 559 aaPredicted RBP11.71□□□□□ -0.53
HPS4-207ENST00000459918 ALS2Q96Q42 1657 aa11.71□□□□□ -0.54
HPS4-207ENST00000459918 EIF3AQ14152 1382 aaKnown RBP11.7□□□□□ -0.54
HPS4-207ENST00000459918 ITSN1Q15811 1721 aa11.7□□□□□ -0.54
HPS4-207ENST00000459918 ONECUT3O60422 494 aaPredicted RBP11.7□□□□□ -0.54
HPS4-207ENST00000459918 MPHOSPH9Q99550 1183 aa11.7□□□□□ -0.54
HPS4-207ENST00000459918 ANKARQ7Z5J8 1434 aa11.69□□□□□ -0.54
HPS4-207ENST00000459918 CFAP70Q5T0N1 1121 aa11.69□□□□□ -0.54
HPS4-207ENST00000459918 HIRIP3Q9BW71 556 aaPredicted RBP11.69□□□□□ -0.54
HPS4-207ENST00000459918 PRDM11Q9NQV5 511 aa11.69□□□□□ -0.54
HPS4-207ENST00000459918 NGDNQ8NEJ9 315 aaKnown RBP11.68□□□□□ -0.54
HPS4-207ENST00000459918 SIRT1Q96EB6 747 aa11.68□□□□□ -0.54
HPS4-207ENST00000459918 THSD7AQ9UPZ6 1657 aa11.68□□□□□ -0.54
HPS4-207ENST00000459918 MINK1Q8N4C8 1332 aaPredicted RBP11.67□□□□□ -0.54
HPS4-207ENST00000459918 DLC1Q96QB1 1528 aa11.67□□□□□ -0.54
HPS4-207ENST00000459918 CRYBG1Q9Y4K1 1723 aa11.67□□□□□ -0.54
HPS4-207ENST00000459918 C14orf93Q9H972 538 aaKnown RBP11.67□□□□□ -0.54
HPS4-207ENST00000459918 STRN4Q9NRL3 753 aa11.67□□□□□ -0.54
HPS4-207ENST00000459918 TULP4Q9NRJ4 1543 aa11.66□□□□□ -0.54
HPS4-207ENST00000459918 SPATA31A5Q5VU36 1347 aa11.66□□□□□ -0.54
HPS4-207ENST00000459918 SPATA31A7Q8IWB4 1347 aa11.66□□□□□ -0.54
HPS4-207ENST00000459918 EZH2Q15910 746 aaKnown RBP11.66□□□□□ -0.54
HPS4-207ENST00000459918 USP35Q9P2H5 1018 aa11.66□□□□□ -0.54
HPS4-207ENST00000459918 TRAK1Q9UPV9 953 aa11.66□□□□□ -0.54
HPS4-207ENST00000459918 PHRF1Q9P1Y6 1649 aaKnown RBP11.66□□□□□ -0.54
HPS4-207ENST00000459918 ACIN1Q9UKV3 1341 aaKnown RBP11.65□□□□□ -0.54
HPS4-207ENST00000459918 TRIM37O94972 964 aa11.65□□□□□ -0.54
HPS4-207ENST00000459918 APBA3O96018 575 aa11.64□□□□□ -0.55
HPS4-207ENST00000459918 PPP1R1BQ9UD71 204 aaPredicted RBP11.64□□□□□ -0.55
HPS4-207ENST00000459918 NUP188Q5SRE5 1749 aa11.63□□□□□ -0.55
HPS4-207ENST00000459918 DISP2A7MBM2 1401 aa11.63□□□□□ -0.55
HPS4-207ENST00000459918 EVA1CP58658 441 aa11.63□□□□□ -0.55
HPS4-207ENST00000459918 PDE3BQ13370 1112 aa11.63□□□□□ -0.55
HPS4-207ENST00000459918 CHRNA2Q15822 529 aa11.63□□□□□ -0.55
HPS4-207ENST00000459918 FAM196AQ6ZSG2 479 aa11.63□□□□□ -0.55
HPS4-207ENST00000459918 KIAA0232Q92628 1395 aa11.63□□□□□ -0.55
HPS4-207ENST00000459918 RREB1Q92766 1687 aa11.62□□□□□ -0.55
HPS4-207ENST00000459918 YY1P25490 414 aa11.62□□□□□ -0.55
HPS4-207ENST00000459918 NBPF8Q3BBV2 869 aa11.62□□□□□ -0.55
HPS4-207ENST00000459918 NBPF14Q5TI25 921 aa11.62□□□□□ -0.55
HPS4-207ENST00000459918 KDM2AQ9Y2K7 1162 aa11.62□□□□□ -0.55
HPS4-207ENST00000459918 SPATA31A1Q5TZJ5 1347 aa11.61□□□□□ -0.55
HPS4-207ENST00000459918 ZC3H6P61129 1189 aaKnown RBP11.61□□□□□ -0.55
HPS4-207ENST00000459918 NUTM2GQ5VZR2 741 aa11.61□□□□□ -0.55
HPS4-207ENST00000459918 PARD3Q8TEW0 1356 aa11.61□□□□□ -0.55
HPS4-207ENST00000459918 ADGRB1O14514 1584 aa11.61□□□□□ -0.55
HPS4-207ENST00000459918 PRR36Q9H6K5 1346 aa11.6□□□□□ -0.55
HPS4-207ENST00000459918 ARHGEF28Q8N1W1 1705 aaKnown RBP11.6□□□□□ -0.55
HPS4-207ENST00000459918 ATP7BP35670 1465 aa11.6□□□□□ -0.55
HPS4-207ENST00000459918 WASLO00401 505 aaPredicted RBP11.6□□□□□ -0.55
HPS4-207ENST00000459918 ZBTB7CA1YPR0 619 aa11.58□□□□□ -0.56
HPS4-207ENST00000459918 DCAF11Q8TEB1 546 aa11.58□□□□□ -0.56
HPS4-207ENST00000459918 CAMKK2Q96RR4 588 aa11.58□□□□□ -0.56
HPS4-207ENST00000459918 NRKQ7Z2Y5 1582 aa11.58□□□□□ -0.56
HPS4-207ENST00000459918 SSH2Q76I76 1423 aa11.57□□□□□ -0.56
HPS4-207ENST00000459918 TOPAZ1Q8N9V7 1692 aa11.56□□□□□ -0.56
HPS4-207ENST00000459918 NUDT16Q96DE0 195 aaKnown RBP11.56□□□□□ -0.56
HPS4-207ENST00000459918 SPON1Q9HCB6 807 aa11.56□□□□□ -0.56
HPS4-207ENST00000459918 PARP4Q9UKK3 1724 aaKnown RBP11.55□□□□□ -0.56
HPS4-207ENST00000459918 KCNA4P22459 653 aa11.55□□□□□ -0.56
HPS4-207ENST00000459918 ABTB2Q8N961 1025 aa11.55□□□□□ -0.56
HPS4-207ENST00000459918 LARP1Q6PKG0 1096 aaKnown RBP11.54□□□□□ -0.56
HPS4-207ENST00000459918 TCP11L2Q8N4U5 519 aa11.54□□□□□ -0.56
HPS4-207ENST00000459918 CAMTA1Q9Y6Y1 1673 aa11.54□□□□□ -0.56
HPS4-207ENST00000459918 BARGINQ6ZT62 677 aa11.53□□□□□ -0.56
HPS4-207ENST00000459918 CDK19Q9BWU1 502 aa11.53□□□□□ -0.56
HPS4-207ENST00000459918 AKAP12Q02952 1782 aa11.53□□□□□ -0.56
HPS4-207ENST00000459918 ACEP12821 1306 aa11.53□□□□□ -0.56
HPS4-207ENST00000459918 LMO7Q8WWI1 1683 aa11.52□□□□□ -0.56
HPS4-207ENST00000459918 RGPD3A6NKT7 1758 aaPredicted RBP11.52□□□□□ -0.57
HPS4-207ENST00000459918 RGPD4Q7Z3J3 1758 aa11.52□□□□□ -0.57
HPS4-207ENST00000459918 KCNQ2O43526 872 aa11.52□□□□□ -0.57
HPS4-207ENST00000459918 RAB3GAP2Q9H2M9 1393 aa11.52□□□□□ -0.57
HPS4-207ENST00000459918 NINLQ9Y2I6 1382 aa11.52□□□□□ -0.57
HPS4-207ENST00000459918 OVOS2A0A0G2JMS6 1433 aa11.52□□□□□ -0.57
HPS4-207ENST00000459918 OVOS2A0A0J9YW53 1432 aa11.52□□□□□ -0.57
HPS4-207ENST00000459918 OVOS2Q6IE36 1432 aa11.52□□□□□ -0.57
HPS4-207ENST00000459918 LRRC37A3O60309 1634 aa11.51□□□□□ -0.57
HPS4-207ENST00000459918 SRPK2P78362 688 aaKnown RBP11.51□□□□□ -0.57
HPS4-207ENST00000459918 SBF2Q86WG5 1849 aa11.51□□□□□ -0.57
HPS4-207ENST00000459918 WNK3Q9BYP7 1800 aa11.51□□□□□ -0.57
HPS4-207ENST00000459918 C11orf95C9JLR9 678 aaPredicted RBP11.5□□□□□ -0.57
HPS4-207ENST00000459918 NLRP13Q86W25 1043 aa11.5□□□□□ -0.57
HPS4-207ENST00000459918 THRAP3Q9Y2W1 955 aaKnown RBP11.5□□□□□ -0.57
HPS4-207ENST00000459918 CCDC61Q9Y6R9 512 aa11.5□□□□□ -0.57
HPS4-207ENST00000459918 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
HPS4-207ENST00000459918 POLR3AO14802 1390 aaPredicted RBP11.5□□□□□ -0.57
HPS4-207ENST00000459918 COL5A2P05997 1499 aaPredicted RBP11.5□□□□□ -0.57
HPS4-207ENST00000459918 TOM1L2Q6ZVM7 507 aa11.49□□□□□ -0.57
HPS4-207ENST00000459918 BCL11BQ9C0K0 894 aaPredicted RBP11.49□□□□□ -0.57
HPS4-207ENST00000459918 CPDO75976 1380 aa11.49□□□□□ -0.57
HPS4-207ENST00000459918 CRB1P82279 1406 aa11.49□□□□□ -0.57
HPS4-207ENST00000459918 PPIP5K1Q6PFW1 1433 aa11.49□□□□□ -0.57
HPS4-207ENST00000459918 MYOM1P52179 1685 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms