RNA–Protein interactions for RNA: ENST00000459750.5

MCF2L2-204, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 3,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-204ENST00000459750 CLTCQ00610 1675 aaKnown RBP11.62□□□□□ -0.55
MCF2L2-204ENST00000459750 SBNO2Q9Y2G9 1366 aa11.62□□□□□ -0.55
MCF2L2-204ENST00000459750 FTSJ3Q8IY81 847 aaKnown RBP11.62□□□□□ -0.55
MCF2L2-204ENST00000459750 FANCIQ9NVI1 1328 aa11.62□□□□□ -0.55
MCF2L2-204ENST00000459750 ZBTB47Q9UFB7 747 aaPredicted RBP11.62□□□□□ -0.55
MCF2L2-204ENST00000459750 NOP58Q9Y2X3 529 aaKnown RBP11.62□□□□□ -0.55
MCF2L2-204ENST00000459750 NKTRP30414 1462 aaKnown RBP11.62□□□□□ -0.55
MCF2L2-204ENST00000459750 IFT172Q9UG01 1749 aa11.62□□□□□ -0.55
MCF2L2-204ENST00000459750 NPC1L1Q9UHC9 1359 aa11.61□□□□□ -0.55
MCF2L2-204ENST00000459750 ITPRIPQ8IWB1 547 aa11.61□□□□□ -0.55
MCF2L2-204ENST00000459750 MIS18AQ9NYP9 233 aa11.61□□□□□ -0.55
MCF2L2-204ENST00000459750 TRIM35Q9UPQ4 493 aa11.61□□□□□ -0.55
MCF2L2-204ENST00000459750 A2ML1A8K2U0 1454 aa11.61□□□□□ -0.55
MCF2L2-204ENST00000459750 PRR36Q9H6K5 1346 aa11.6□□□□□ -0.55
MCF2L2-204ENST00000459750 PTPRMP28827 1452 aa11.6□□□□□ -0.55
MCF2L2-204ENST00000459750 XPCQ01831 940 aaPredicted RBP11.6□□□□□ -0.55
MCF2L2-204ENST00000459750 KRT24Q2M2I5 525 aa11.6□□□□□ -0.55
MCF2L2-204ENST00000459750 TRMT2AQ8IZ69 625 aaKnown RBP11.6□□□□□ -0.55
MCF2L2-204ENST00000459750 COG3Q96JB2 828 aa11.6□□□□□ -0.55
MCF2L2-204ENST00000459750 PCDHB15Q9Y5E8 787 aa11.6□□□□□ -0.55
MCF2L2-204ENST00000459750 PREX1Q8TCU6 1659 aa11.6□□□□□ -0.55
MCF2L2-204ENST00000459750 LMOD2Q6P5Q4 547 aa11.6□□□□□ -0.55
MCF2L2-204ENST00000459750 SSH1Q8WYL5 1049 aa11.6□□□□□ -0.55
MCF2L2-204ENST00000459750 C1orf115Q9H7X2 142 aa11.6□□□□□ -0.55
MCF2L2-204ENST00000459750 ARHGAP31Q2M1Z3 1444 aa11.59□□□□□ -0.55
MCF2L2-204ENST00000459750 NEFMP07197 916 aa11.59□□□□□ -0.55
MCF2L2-204ENST00000459750 AMOTL2Q9Y2J4 779 aa11.59□□□□□ -0.55
MCF2L2-204ENST00000459750 ATAD2Q6PL18 1390 aa11.59□□□□□ -0.55
MCF2L2-204ENST00000459750 ALKQ9UM73 1620 aa11.59□□□□□ -0.55
MCF2L2-204ENST00000459750 PPIP5K1Q6PFW1 1433 aa11.59□□□□□ -0.55
MCF2L2-204ENST00000459750 NGDNQ8NEJ9 315 aaKnown RBP11.59□□□□□ -0.55
MCF2L2-204ENST00000459750 BACH2Q9BYV9 841 aa11.59□□□□□ -0.55
MCF2L2-204ENST00000459750 CCDC61Q9Y6R9 512 aa11.59□□□□□ -0.55
MCF2L2-204ENST00000459750 TMEM131LA2VDJ0 1609 aa11.59□□□□□ -0.55
MCF2L2-204ENST00000459750 TNRQ92752 1358 aa11.59□□□□□ -0.55
MCF2L2-204ENST00000459750 HSP90AB2PQ58FF8 381 aa11.58□□□□□ -0.55
MCF2L2-204ENST00000459750 TSPYL6Q8N831 410 aa11.58□□□□□ -0.55
MCF2L2-204ENST00000459750 NOB1Q9ULX3 412 aaKnown RBP11.58□□□□□ -0.56
MCF2L2-204ENST00000459750 ROBO2Q9HCK4 1378 aa11.58□□□□□ -0.56
MCF2L2-204ENST00000459750 ABCC11Q96J66 1382 aa11.58□□□□□ -0.56
MCF2L2-204ENST00000459750 KIAA1210Q9ULL0 1709 aa11.58□□□□□ -0.56
MCF2L2-204ENST00000459750 SULT6B1Q6IMI4 303 aa11.57□□□□□ -0.56
MCF2L2-204ENST00000459750 IPO9Q96P70 1041 aaKnown RBP11.57□□□□□ -0.56
MCF2L2-204ENST00000459750 MYH16Q9H6N6 1097 aa11.57□□□□□ -0.56
MCF2L2-204ENST00000459750 EID1Q9Y6B2 187 aa11.57□□□□□ -0.56
MCF2L2-204ENST00000459750 ACEP12821 1306 aa11.57□□□□□ -0.56
MCF2L2-204ENST00000459750 ARHGEF28Q8N1W1 1705 aaKnown RBP11.57□□□□□ -0.56
MCF2L2-204ENST00000459750 INSRP06213 1382 aa11.57□□□□□ -0.56
MCF2L2-204ENST00000459750 PDE4CQ08493 712 aa11.57□□□□□ -0.56
MCF2L2-204ENST00000459750 NECTIN2Q92692 538 aa11.57□□□□□ -0.56
MCF2L2-204ENST00000459750 PLEKHF1Q96S99 279 aa11.57□□□□□ -0.56
MCF2L2-204ENST00000459750 MCM10Q7L590 875 aa11.56□□□□□ -0.56
MCF2L2-204ENST00000459750 ZNF428Q96B54 188 aa11.56□□□□□ -0.56
MCF2L2-204ENST00000459750 SETBP1Q9Y6X0 1596 aa11.56□□□□□ -0.56
MCF2L2-204ENST00000459750 CENPQQ7L2Z9 268 aaPredicted RBP11.56□□□□□ -0.56
MCF2L2-204ENST00000459750 FOXO3O43524 673 aa11.56□□□□□ -0.56
MCF2L2-204ENST00000459750 APBB1O00213 710 aa11.55□□□□□ -0.56
MCF2L2-204ENST00000459750 SEC24BO95487 1268 aa11.55□□□□□ -0.56
MCF2L2-204ENST00000459750 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.55□□□□□ -0.56
MCF2L2-204ENST00000459750 CD163L1Q9NR16 1453 aa11.55□□□□□ -0.56
MCF2L2-204ENST00000459750 PDIA4P13667 645 aaKnown RBP11.55□□□□□ -0.56
MCF2L2-204ENST00000459750 SPRYD3Q8NCJ5 442 aa11.55□□□□□ -0.56
MCF2L2-204ENST00000459750 ZC3H13Q5T200 1668 aaKnown RBP11.55□□□□□ -0.56
MCF2L2-204ENST00000459750 TRIM27P14373 513 aa11.54□□□□□ -0.56
MCF2L2-204ENST00000459750 KDM2BQ8NHM5 1336 aa11.54□□□□□ -0.56
MCF2L2-204ENST00000459750 HDGFP51858 240 aaKnown RBP11.54□□□□□ -0.56
MCF2L2-204ENST00000459750 USHBP1Q8N6Y0 703 aa11.54□□□□□ -0.56
MCF2L2-204ENST00000459750 KCNA6P17658 529 aa11.54□□□□□ -0.56
MCF2L2-204ENST00000459750 WDR63Q8IWG1 891 aa11.54□□□□□ -0.56
MCF2L2-204ENST00000459750 NCBP3Q53F19 620 aaKnown RBP11.53□□□□□ -0.56
MCF2L2-204ENST00000459750 DZIP1LQ8IYY4 767 aaKnown RBP11.53□□□□□ -0.56
MCF2L2-204ENST00000459750 TMEM57Q8N5G2 664 aa11.53□□□□□ -0.56
MCF2L2-204ENST00000459750 RSPH6AQ9H0K4 717 aa11.53□□□□□ -0.56
MCF2L2-204ENST00000459750 TMEM2Q9UHN6 1383 aa11.52□□□□□ -0.56
MCF2L2-204ENST00000459750 ZKSCAN2Q63HK3 967 aa11.52□□□□□ -0.56
MCF2L2-204ENST00000459750 ARHGEF40Q8TER5 1519 aa11.52□□□□□ -0.57
MCF2L2-204ENST00000459750 NLRP6P59044 892 aa11.52□□□□□ -0.57
MCF2L2-204ENST00000459750 C8orf58Q8NAV2 365 aa11.51□□□□□ -0.57
MCF2L2-204ENST00000459750 GLIPR1L2Q4G1C9 344 aa11.51□□□□□ -0.57
MCF2L2-204ENST00000459750 PDZRN3Q9UPQ7 1066 aa11.51□□□□□ -0.57
MCF2L2-204ENST00000459750 IL13P35225 146 aa11.5□□□□□ -0.57
MCF2L2-204ENST00000459750 AMPHP49418 695 aa11.5□□□□□ -0.57
MCF2L2-204ENST00000459750 EIF4A2Q14240 407 aaKnown RBP11.5□□□□□ -0.57
MCF2L2-204ENST00000459750 C8orf34Q49A92 452 aa11.5□□□□□ -0.57
MCF2L2-204ENST00000459750 KLHL34Q8N239 644 aa11.5□□□□□ -0.57
MCF2L2-204ENST00000459750 MBIPQ9NS73 344 aa11.5□□□□□ -0.57
MCF2L2-204ENST00000459750 MYO3AQ8NEV4 1616 aa11.5□□□□□ -0.57
MCF2L2-204ENST00000459750 ZFYVE9O95405 1425 aa11.5□□□□□ -0.57
MCF2L2-204ENST00000459750 TTC21BQ7Z4L5 1316 aa11.49□□□□□ -0.57
MCF2L2-204ENST00000459750 PDE3AQ14432 1141 aa11.49□□□□□ -0.57
MCF2L2-204ENST00000459750 FCHSD2O94868 740 aa11.49□□□□□ -0.57
MCF2L2-204ENST00000459750 PHF23Q9BUL5 403 aaPredicted RBP11.49□□□□□ -0.57
MCF2L2-204ENST00000459750 CPS1P31327 1500 aa11.49□□□□□ -0.57
MCF2L2-204ENST00000459750 LNPKQ9C0E8 428 aa11.49□□□□□ -0.57
MCF2L2-204ENST00000459750 RTN4Q9NQC3 1192 aaKnown RBP11.49□□□□□ -0.57
MCF2L2-204ENST00000459750 SHPRHQ149N8 1683 aa11.49□□□□□ -0.57
MCF2L2-204ENST00000459750 MVPQ14764 893 aaKnown RBP11.48□□□□□ -0.57
MCF2L2-204ENST00000459750 NFE2L2Q16236 605 aa11.48□□□□□ -0.57
MCF2L2-204ENST00000459750 ABTB2Q8N961 1025 aa11.48□□□□□ -0.57
MCF2L2-204ENST00000459750 IL27Q8NEV9 243 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms