RNA–Protein interactions for RNA: ENST00000459659.1

PDCD6IP-207, Transcript of programmed cell death 6 interacting protein, humanhuman

TSL 3

Gene PDCD6IP, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-207ENST00000459659 PURBQ96QR8 312 aaKnown RBP7.44□□□□□ -1.22
PDCD6IP-207ENST00000459659 RIMBP3CA6NJZ7 1639 aa7.43□□□□□ -1.22
PDCD6IP-207ENST00000459659 RIMBP3BA6NNM3 1639 aa7.43□□□□□ -1.22
PDCD6IP-207ENST00000459659 RIMBP3Q9UFD9 1639 aa7.43□□□□□ -1.22
PDCD6IP-207ENST00000459659 KDM4AO75164 1064 aa7.43□□□□□ -1.22
PDCD6IP-207ENST00000459659 JUNDP17535 347 aa7.43□□□□□ -1.22
PDCD6IP-207ENST00000459659 RASSF7Q02833 373 aa7.43□□□□□ -1.22
PDCD6IP-207ENST00000459659 MRPL14Q6P1L8 145 aaKnown RBP7.43□□□□□ -1.22
PDCD6IP-207ENST00000459659 TLL2Q9Y6L7 1015 aa7.43□□□□□ -1.22
PDCD6IP-207ENST00000459659 PRDM2Q13029 1718 aa7.42□□□□□ -1.22
PDCD6IP-207ENST00000459659 NUDT12Q9BQG2 462 aa7.41□□□□□ -1.22
PDCD6IP-207ENST00000459659 RSF1Q96T23 1441 aaPredicted RBP7.41□□□□□ -1.22
PDCD6IP-207ENST00000459659 ZNF608Q9ULD9 1512 aaPredicted RBP7.4□□□□□ -1.22
PDCD6IP-207ENST00000459659 EIF4G3O43432 1585 aaKnown RBP7.39□□□□□ -1.23
PDCD6IP-207ENST00000459659 HOXA2O43364 376 aa7.39□□□□□ -1.23
PDCD6IP-207ENST00000459659 TIMP2P16035 220 aa7.39□□□□□ -1.23
PDCD6IP-207ENST00000459659 NNTQ13423 1086 aa7.39□□□□□ -1.23
PDCD6IP-207ENST00000459659 LINC01559Q495D7 138 aa7.39□□□□□ -1.23
PDCD6IP-207ENST00000459659 ARHGEF11O15085 1522 aa7.38□□□□□ -1.23
PDCD6IP-207ENST00000459659 TESPA1A2RU30 521 aaPredicted RBP7.38□□□□□ -1.23
PDCD6IP-207ENST00000459659 SCARF1Q14162 830 aa7.38□□□□□ -1.23
PDCD6IP-207ENST00000459659 PPFIA3O75145 1194 aa7.37□□□□□ -1.23
PDCD6IP-207ENST00000459659 KRT76Q01546 638 aa7.37□□□□□ -1.23
PDCD6IP-207ENST00000459659 IFT140Q96RY7 1462 aa7.36□□□□□ -1.23
PDCD6IP-207ENST00000459659 WDR4P57081 412 aaKnown RBP7.36□□□□□ -1.23
PDCD6IP-207ENST00000459659 XP32Q5T750 250 aa7.36□□□□□ -1.23
PDCD6IP-207ENST00000459659 GPR161Q8N6U8 529 aaKnown RBP7.36□□□□□ -1.23
PDCD6IP-207ENST00000459659 BAP1Q92560 729 aa7.36□□□□□ -1.23
PDCD6IP-207ENST00000459659 KLF16Q9BXK1 252 aaPredicted RBP7.36□□□□□ -1.23
PDCD6IP-207ENST00000459659 ADAMTS8Q9UP79 889 aa7.36□□□□□ -1.23
PDCD6IP-207ENST00000459659 TOPBP1Q92547 1522 aa7.36□□□□□ -1.23
PDCD6IP-207ENST00000459659 CHD1O14646 1710 aa7.35□□□□□ -1.23
PDCD6IP-207ENST00000459659 USP46P62068 366 aa7.35□□□□□ -1.23
PDCD6IP-207ENST00000459659 CCDC88BA6NC98 1476 aa7.34□□□□□ -1.23
PDCD6IP-207ENST00000459659 DNMBPQ6XZF7 1577 aa7.33□□□□□ -1.24
PDCD6IP-207ENST00000459659 ADH1CP00326 375 aa7.33□□□□□ -1.24
PDCD6IP-207ENST00000459659 C6orf118Q5T5N4 469 aa7.33□□□□□ -1.24
PDCD6IP-207ENST00000459659 RETREG3Q86VR2 466 aa7.33□□□□□ -1.24
PDCD6IP-207ENST00000459659 P3H3Q8IVL6 736 aa7.33□□□□□ -1.24
PDCD6IP-207ENST00000459659 CNTNAP3BQ96NU0 1288 aa7.33□□□□□ -1.24
PDCD6IP-207ENST00000459659 CNTNAP3Q9BZ76 1288 aa7.33□□□□□ -1.24
PDCD6IP-207ENST00000459659 UNC93B1Q9H1C4 597 aa7.33□□□□□ -1.24
PDCD6IP-207ENST00000459659 ZFAND3Q9H8U3 227 aa7.33□□□□□ -1.24
PDCD6IP-207ENST00000459659 MAN1A2O60476 641 aa7.32□□□□□ -1.24
PDCD6IP-207ENST00000459659 CCNYL3P0C7X3 344 aa7.32□□□□□ -1.24
PDCD6IP-207ENST00000459659 GPAT2Q6NUI2 795 aa7.32□□□□□ -1.24
PDCD6IP-207ENST00000459659 ARAP1Q96P48 1450 aa7.31□□□□□ -1.24
PDCD6IP-207ENST00000459659 PLEKHG3A1L390 1219 aa7.31□□□□□ -1.24
PDCD6IP-207ENST00000459659 MDM2Q00987 491 aaPredicted RBP7.31□□□□□ -1.24
PDCD6IP-207ENST00000459659 MPNDQ8N594 471 aa7.31□□□□□ -1.24
PDCD6IP-207ENST00000459659 PCDHGC3Q9UN70 934 aa7.31□□□□□ -1.24
PDCD6IP-207ENST00000459659 MS4A1P11836 297 aa7.3□□□□□ -1.24
PDCD6IP-207ENST00000459659 VARSP26640 1264 aaKnown RBP7.3□□□□□ -1.24
PDCD6IP-207ENST00000459659 SMYD5Q6GMV2 418 aa7.3□□□□□ -1.24
PDCD6IP-207ENST00000459659 ZNF511Q8NB15 262 aa7.3□□□□□ -1.24
PDCD6IP-207ENST00000459659 TARBP1Q13395 1621 aaKnown RBP7.3□□□□□ -1.24
PDCD6IP-207ENST00000459659 AQRO60306 1485 aaKnown RBP eCLIP7.3□□□□□ -1.242e-11■■■■■ 42.8
PDCD6IP-207ENST00000459659 ZIC2O95409 532 aaPredicted RBP7.29□□□□□ -1.24
PDCD6IP-207ENST00000459659 ZNF385CQ66K41 422 aaPredicted RBP7.29□□□□□ -1.24
PDCD6IP-207ENST00000459659 ITPKCQ96DU7 683 aa7.29□□□□□ -1.24
PDCD6IP-207ENST00000459659 EVA1BQ9NVM1 165 aa7.29□□□□□ -1.24
PDCD6IP-207ENST00000459659 RNF225M0QZC1 329 aaPredicted RBP7.28□□□□□ -1.24
PDCD6IP-207ENST00000459659 IRS1P35568 1242 aa7.28□□□□□ -1.24
PDCD6IP-207ENST00000459659 CYB5RLQ6IPT4 315 aa7.28□□□□□ -1.24
PDCD6IP-207ENST00000459659 WHAMMQ8TF30 809 aa7.28□□□□□ -1.24
PDCD6IP-207ENST00000459659 DNMT3LQ9UJW3 386 aa7.28□□□□□ -1.24
PDCD6IP-207ENST00000459659 POLA1P09884 1462 aaPredicted RBP7.28□□□□□ -1.24
PDCD6IP-207ENST00000459659 KCNH2Q12809 1159 aa7.27□□□□□ -1.25
PDCD6IP-207ENST00000459659 GPIHBP1Q8IV16 184 aa7.27□□□□□ -1.25
PDCD6IP-207ENST00000459659 KRTAP4-8Q9BYQ9 185 aa7.27□□□□□ -1.25
PDCD6IP-207ENST00000459659 ABCC8Q09428 1581 aa7.26□□□□□ -1.25
PDCD6IP-207ENST00000459659 SNAPC4Q5SXM2 1469 aa7.26□□□□□ -1.25
PDCD6IP-207ENST00000459659 RAD54L2Q9Y4B4 1467 aa7.26□□□□□ -1.25
PDCD6IP-207ENST00000459659 C6orf229H3BNL8 230 aa7.26□□□□□ -1.25
PDCD6IP-207ENST00000459659 NR3C2P08235 984 aa7.26□□□□□ -1.25
PDCD6IP-207ENST00000459659 PTPRNQ16849 979 aa7.26□□□□□ -1.25
PDCD6IP-207ENST00000459659 COL25A1Q9BXS0 654 aaPredicted RBP7.26□□□□□ -1.25
PDCD6IP-207ENST00000459659 DNMT3AQ9Y6K1 912 aaPredicted RBP7.26□□□□□ -1.25
PDCD6IP-207ENST00000459659 IGHA1P01876 353 aa7.25□□□□□ -1.25
PDCD6IP-207ENST00000459659 FDX1P10109 184 aa7.25□□□□□ -1.25
PDCD6IP-207ENST00000459659 BMP2P12643 396 aa7.25□□□□□ -1.25
PDCD6IP-207ENST00000459659 ARID5BQ14865 1188 aa7.25□□□□□ -1.25
PDCD6IP-207ENST00000459659 RNFT1Q5M7Z0 435 aa7.25□□□□□ -1.25
PDCD6IP-207ENST00000459659 SOS2Q07890 1332 aaPredicted RBP7.25□□□□□ -1.25
PDCD6IP-207ENST00000459659 LINC00528Q8N1L1 170 aa7.24□□□□□ -1.25
PDCD6IP-207ENST00000459659 SVOPQ8N4V2 548 aa7.24□□□□□ -1.25
PDCD6IP-207ENST00000459659 FOXJ1Q92949 421 aa7.24□□□□□ -1.25
PDCD6IP-207ENST00000459659 FGD5Q6ZNL6 1462 aa7.24□□□□□ -1.25
PDCD6IP-207ENST00000459659 CLASP1Q7Z460 1538 aa7.23□□□□□ -1.25
PDCD6IP-207ENST00000459659 MAP2K5Q13163 448 aa7.23□□□□□ -1.25
PDCD6IP-207ENST00000459659 NUTM1Q86Y26 1132 aa7.23□□□□□ -1.25
PDCD6IP-207ENST00000459659 FAM174AQ8TBP5 190 aa7.23□□□□□ -1.25
PDCD6IP-207ENST00000459659 CDK15Q96Q40 435 aa7.23□□□□□ -1.25
PDCD6IP-207ENST00000459659 TDRD9Q8NDG6 1382 aaKnown RBP7.22□□□□□ -1.25
PDCD6IP-207ENST00000459659 SYNJ1O43426 1573 aa7.22□□□□□ -1.25
PDCD6IP-207ENST00000459659 ARHGEF15O94989 841 aa7.22□□□□□ -1.25
PDCD6IP-207ENST00000459659 FAM217BQ9NTX9 383 aaPredicted RBP7.22□□□□□ -1.25
PDCD6IP-207ENST00000459659 IRF6O14896 467 aa7.21□□□□□ -1.26
PDCD6IP-207ENST00000459659 NDUFV2P19404 249 aa7.21□□□□□ -1.26
PDCD6IP-207ENST00000459659 GRM5P41594 1212 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms