RNA–Protein interactions for RNA: ENST00000459645.1

RGPD6-206, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 3

Gene RGPD6, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-206ENST00000459645 KLHL34Q8N239 644 aa6.36□□□□□ -1.39
RGPD6-206ENST00000459645 ABCC5O15440 1437 aa6.35□□□□□ -1.39
RGPD6-206ENST00000459645 LRPPRCP42704 1394 aaKnown RBP6.35□□□□□ -1.39
RGPD6-206ENST00000459645 APLP1P51693 650 aa6.35□□□□□ -1.39
RGPD6-206ENST00000459645 NPM2Q86SE8 214 aaKnown RBP6.35□□□□□ -1.39
RGPD6-206ENST00000459645 ZNF526Q8TF50 670 aaPredicted RBP6.35□□□□□ -1.39
RGPD6-206ENST00000459645 GPBP1L1Q9HC44 474 aaPredicted RBP6.35□□□□□ -1.39
RGPD6-206ENST00000459645 NWD2Q9ULI1 1742 aa6.35□□□□□ -1.39
RGPD6-206ENST00000459645 MAP3K5Q99683 1374 aa6.34□□□□□ -1.39
RGPD6-206ENST00000459645 YBX3P16989 372 aaKnown RBP eCLIP6.34□□□□□ -1.39
RGPD6-206ENST00000459645 LMOD2Q6P5Q4 547 aa6.34□□□□□ -1.39
RGPD6-206ENST00000459645 PTF1AQ7RTS3 328 aa6.34□□□□□ -1.39
RGPD6-206ENST00000459645 PROM2Q8N271 834 aa6.34□□□□□ -1.39
RGPD6-206ENST00000459645 BCL11BQ9C0K0 894 aaPredicted RBP6.34□□□□□ -1.39
RGPD6-206ENST00000459645 MTFR1LQ9H019 292 aa6.34□□□□□ -1.39
RGPD6-206ENST00000459645 MYOM3Q5VTT5 1437 aa6.33□□□□□ -1.4
RGPD6-206ENST00000459645 TNS3Q68CZ2 1445 aa6.33□□□□□ -1.4
RGPD6-206ENST00000459645 SPATA31A1Q5TZJ5 1347 aa6.33□□□□□ -1.4
RGPD6-206ENST00000459645 CHIC2Q9UKJ5 165 aa6.33□□□□□ -1.4
RGPD6-206ENST00000459645 WWC3Q9ULE0 1092 aa6.33□□□□□ -1.4
RGPD6-206ENST00000459645 NRAPQ86VF7 1730 aa6.33□□□□□ -1.4
RGPD6-206ENST00000459645 CCDC144AA2RUR9 1427 aa6.33□□□□□ -1.4
RGPD6-206ENST00000459645 NEXMIFQ5QGS0 1516 aa6.32□□□□□ -1.4
RGPD6-206ENST00000459645 HMGB1P09429 215 aaKnown RBP6.32□□□□□ -1.4
RGPD6-206ENST00000459645 HTRA3P83110 453 aa6.32□□□□□ -1.4
RGPD6-206ENST00000459645 PDE3BQ13370 1112 aa6.32□□□□□ -1.4
RGPD6-206ENST00000459645 JMYQ8N9B5 988 aa6.32□□□□□ -1.4
RGPD6-206ENST00000459645 NLGN2Q8NFZ4 835 aa6.32□□□□□ -1.4
RGPD6-206ENST00000459645 TECPR2O15040 1411 aa6.32□□□□□ -1.4
RGPD6-206ENST00000459645 KIF3CO14782 793 aa6.31□□□□□ -1.4
RGPD6-206ENST00000459645 ZNF326Q5BKZ1 582 aaKnown RBP6.31□□□□□ -1.4
RGPD6-206ENST00000459645 USP35Q9P2H5 1018 aa6.31□□□□□ -1.4
RGPD6-206ENST00000459645 HFM1A2PYH4 1435 aa6.31□□□□□ -1.4
RGPD6-206ENST00000459645 NAIPQ13075 1403 aa6.31□□□□□ -1.4
RGPD6-206ENST00000459645 CDC42BPGQ6DT37 1551 aa6.31□□□□□ -1.4
RGPD6-206ENST00000459645 ADCY9O60503 1353 aa6.31□□□□□ -1.4
RGPD6-206ENST00000459645 PLSCR1O15162 318 aa6.3□□□□□ -1.4
RGPD6-206ENST00000459645 PDIA4P13667 645 aaKnown RBP6.3□□□□□ -1.4
RGPD6-206ENST00000459645 SLC15A2Q16348 729 aa6.3□□□□□ -1.4
RGPD6-206ENST00000459645 ERICH6BQ5W0A0 696 aa6.3□□□□□ -1.4
RGPD6-206ENST00000459645 KLRG1Q96E93 195 aa6.3□□□□□ -1.4
RGPD6-206ENST00000459645 STK32BQ9NY57 414 aa6.3□□□□□ -1.4
RGPD6-206ENST00000459645 PRAG1Q86YV5 1406 aa6.3□□□□□ -1.4
RGPD6-206ENST00000459645 RRBP1Q9P2E9 1410 aaKnown RBP6.3□□□□□ -1.4
RGPD6-206ENST00000459645 ARHGEF10O15013 1369 aa6.3□□□□□ -1.4
RGPD6-206ENST00000459645 PSME1Q06323 249 aa6.29□□□□□ -1.4
RGPD6-206ENST00000459645 STRN4Q9NRL3 753 aa6.29□□□□□ -1.4
RGPD6-206ENST00000459645 GTF3C3Q9Y5Q9 886 aa6.29□□□□□ -1.4
RGPD6-206ENST00000459645 SBNO1A3KN83 1393 aa6.29□□□□□ -1.4
RGPD6-206ENST00000459645 ANKRD30AQ9BXX3 1397 aa6.29□□□□□ -1.4
RGPD6-206ENST00000459645 ABCA3Q99758 1704 aa6.28□□□□□ -1.4
RGPD6-206ENST00000459645 DAPK1P53355 1430 aa6.28□□□□□ -1.4
RGPD6-206ENST00000459645 GRIN3BO60391 1043 aa6.28□□□□□ -1.4
RGPD6-206ENST00000459645 CHRNA2Q15822 529 aa6.28□□□□□ -1.4
RGPD6-206ENST00000459645 BARGINQ6ZT62 677 aa6.28□□□□□ -1.4
RGPD6-206ENST00000459645 WAPLQ7Z5K2 1190 aa6.28□□□□□ -1.4
RGPD6-206ENST00000459645 ANP32EQ9BTT0 268 aa6.28□□□□□ -1.4
RGPD6-206ENST00000459645 PRDM11Q9NQV5 511 aa6.28□□□□□ -1.4
RGPD6-206ENST00000459645 CROCC2H7BZ55 1655 aa6.27□□□□□ -1.41
RGPD6-206ENST00000459645 TNS2Q63HR2 1409 aa6.27□□□□□ -1.41
RGPD6-206ENST00000459645 FAM161AQ3B820 660 aa6.27□□□□□ -1.41
RGPD6-206ENST00000459645 PHF8Q9UPP1 1060 aa6.27□□□□□ -1.41
RGPD6-206ENST00000459645 COL14A1Q05707 1796 aaKnown RBP6.26□□□□□ -1.41
RGPD6-206ENST00000459645 TXNRD1Q16881 649 aa6.26□□□□□ -1.41
RGPD6-206ENST00000459645 TAF7LQ5H9L4 462 aa6.26□□□□□ -1.41
RGPD6-206ENST00000459645 KANK4Q5T7N3 995 aaPredicted RBP6.26□□□□□ -1.41
RGPD6-206ENST00000459645 PLEKHH1Q9ULM0 1364 aa6.26□□□□□ -1.41
RGPD6-206ENST00000459645 IQGAP3Q86VI3 1631 aa6.25□□□□□ -1.41
RGPD6-206ENST00000459645 KCNA4P22459 653 aa6.25□□□□□ -1.41
RGPD6-206ENST00000459645 LARP1Q6PKG0 1096 aaKnown RBP6.25□□□□□ -1.41
RGPD6-206ENST00000459645 PKNOX2Q96KN3 472 aa6.25□□□□□ -1.41
RGPD6-206ENST00000459645 STK26Q9P289 416 aa6.25□□□□□ -1.41
RGPD6-206ENST00000459645 AATKQ6ZMQ8 1374 aa6.25□□□□□ -1.41
RGPD6-206ENST00000459645 KIAA0232Q92628 1395 aa6.25□□□□□ -1.41
RGPD6-206ENST00000459645 ANKRD50Q9ULJ7 1429 aa6.25□□□□□ -1.41
RGPD6-206ENST00000459645 E9PCH4 1651 aa6.24□□□□□ -1.41
RGPD6-206ENST00000459645 TOMM70O94826 608 aa6.24□□□□□ -1.41
RGPD6-206ENST00000459645 HSPA1AP0DMV8 641 aaKnown RBP6.24□□□□□ -1.41
RGPD6-206ENST00000459645 HSPA1BP0DMV9 641 aaKnown RBP6.24□□□□□ -1.41
RGPD6-206ENST00000459645 ZNF827Q17R98 1081 aa6.24□□□□□ -1.41
RGPD6-206ENST00000459645 TCP11L2Q8N4U5 519 aa6.24□□□□□ -1.41
RGPD6-206ENST00000459645 PMFBP1Q8TBY8 1022 aa6.24□□□□□ -1.41
RGPD6-206ENST00000459645 OVOS2A0A0G2JMS6 1433 aa6.24□□□□□ -1.41
RGPD6-206ENST00000459645 OVOS2A0A0J9YW53 1432 aa6.24□□□□□ -1.41
RGPD6-206ENST00000459645 OVOS2Q6IE36 1432 aa6.24□□□□□ -1.41
RGPD6-206ENST00000459645 NRXN1Q9ULB1 1477 aa6.23□□□□□ -1.41
RGPD6-206ENST00000459645 SSH2Q76I76 1423 aa6.23□□□□□ -1.41
RGPD6-206ENST00000459645 KIF1AQ12756 1690 aa6.23□□□□□ -1.41
RGPD6-206ENST00000459645 RGPD3A6NKT7 1758 aaPredicted RBP6.22□□□□□ -1.41
RGPD6-206ENST00000459645 RGPD4Q7Z3J3 1758 aa6.22□□□□□ -1.41
RGPD6-206ENST00000459645 POLD1P28340 1107 aa6.22□□□□□ -1.41
RGPD6-206ENST00000459645 EVA1CP58658 441 aa6.22□□□□□ -1.41
RGPD6-206ENST00000459645 TPRNQ4KMQ1 711 aa6.22□□□□□ -1.41
RGPD6-206ENST00000459645 PEAK1Q9H792 1746 aa6.22□□□□□ -1.41
RGPD6-206ENST00000459645 DHX57Q6P158 1386 aaKnown RBP6.21□□□□□ -1.41
RGPD6-206ENST00000459645 C11orf95C9JLR9 678 aaPredicted RBP6.21□□□□□ -1.42
RGPD6-206ENST00000459645 BRD2P25440 801 aaKnown RBP6.21□□□□□ -1.42
RGPD6-206ENST00000459645 ZC3H6P61129 1189 aaKnown RBP6.21□□□□□ -1.42
RGPD6-206ENST00000459645 PDE4CQ08493 712 aa6.21□□□□□ -1.42
RGPD6-206ENST00000459645 MARCH10Q8NA82 808 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms