RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 A0A1W2PP64 1363 aa7.76□□□□□ -1.17
RNU1-88P-201ENST00000459274 PARD3Q8TEW0 1356 aa7.76□□□□□ -1.17
RNU1-88P-201ENST00000459274 FMN2Q9NZ56 1722 aa7.76□□□□□ -1.17
RNU1-88P-201ENST00000459274 ANKRD26Q9UPS8 1709 aa7.76□□□□□ -1.17
RNU1-88P-201ENST00000459274 PPM1GO15355 546 aaPredicted RBP7.76□□□□□ -1.17
RNU1-88P-201ENST00000459274 PPP2R1AP30153 589 aa7.76□□□□□ -1.17
RNU1-88P-201ENST00000459274 HNRNPUQ00839 825 aaKnown RBP eCLIP7.76□□□□□ -1.17
RNU1-88P-201ENST00000459274 AMER1Q5JTC6 1135 aaPredicted RBP7.76□□□□□ -1.17
RNU1-88P-201ENST00000459274 LMOD2Q6P5Q4 547 aa7.76□□□□□ -1.17
RNU1-88P-201ENST00000459274 GGNBP2Q9H3C7 697 aa7.76□□□□□ -1.17
RNU1-88P-201ENST00000459274 STRCQ7RTU9 1775 aa7.76□□□□□ -1.17
RNU1-88P-201ENST00000459274 NWD1Q149M9 1564 aa7.76□□□□□ -1.17
RNU1-88P-201ENST00000459274 CDC42BPGQ6DT37 1551 aa7.76□□□□□ -1.17
RNU1-88P-201ENST00000459274 MAP2P11137 1827 aaKnown RBP7.75□□□□□ -1.17
RNU1-88P-201ENST00000459274 HAP1P54257 671 aaPredicted RBP7.75□□□□□ -1.17
RNU1-88P-201ENST00000459274 ABTB2Q8N961 1025 aa7.75□□□□□ -1.17
RNU1-88P-201ENST00000459274 CARD14Q9BXL6 1004 aa7.75□□□□□ -1.17
RNU1-88P-201ENST00000459274 FYB1O15117 783 aa7.74□□□□□ -1.17
RNU1-88P-201ENST00000459274 NLRP6P59044 892 aa7.74□□□□□ -1.17
RNU1-88P-201ENST00000459274 NGEFQ8N5V2 710 aa7.74□□□□□ -1.17
RNU1-88P-201ENST00000459274 KCNH5Q8NCM2 988 aa7.74□□□□□ -1.17
RNU1-88P-201ENST00000459274 RBM33Q96EV2 1170 aaKnown RBP7.74□□□□□ -1.17
RNU1-88P-201ENST00000459274 DCCP43146 1447 aa7.74□□□□□ -1.17
RNU1-88P-201ENST00000459274 MON2Q7Z3U7 1717 aa7.74□□□□□ -1.17
RNU1-88P-201ENST00000459274 NALCNQ8IZF0 1738 aa7.74□□□□□ -1.17
RNU1-88P-201ENST00000459274 SCAF1Q9H7N4 1312 aaKnown RBP7.74□□□□□ -1.17
RNU1-88P-201ENST00000459274 KIF1AQ12756 1690 aa7.73□□□□□ -1.17
RNU1-88P-201ENST00000459274 TMEM94Q12767 1356 aa7.73□□□□□ -1.17
RNU1-88P-201ENST00000459274 AMPHP49418 695 aa7.73□□□□□ -1.17
RNU1-88P-201ENST00000459274 MTHFSP49914 203 aa7.73□□□□□ -1.17
RNU1-88P-201ENST00000459274 NPHP3Q7Z494 1330 aa7.73□□□□□ -1.17
RNU1-88P-201ENST00000459274 TTC21BQ7Z4L5 1316 aa7.73□□□□□ -1.17
RNU1-88P-201ENST00000459274 CPSF1Q10570 1443 aaKnown RBP7.72□□□□□ -1.17
RNU1-88P-201ENST00000459274 DIAPH1O60610 1272 aaKnown RBP7.72□□□□□ -1.17
RNU1-88P-201ENST00000459274 TOPAZ1Q8N9V7 1692 aa7.72□□□□□ -1.17
RNU1-88P-201ENST00000459274 MAPK8IP3Q9UPT6 1336 aa7.72□□□□□ -1.17
RNU1-88P-201ENST00000459274 USP6P35125 1406 aa7.71□□□□□ -1.17
RNU1-88P-201ENST00000459274 U2SURPO15042 1029 aaKnown RBP7.71□□□□□ -1.18
RNU1-88P-201ENST00000459274 FOXO3O43524 673 aa7.71□□□□□ -1.18
RNU1-88P-201ENST00000459274 TOM1O60784 492 aa7.71□□□□□ -1.18
RNU1-88P-201ENST00000459274 KRT28Q7Z3Y7 464 aa7.71□□□□□ -1.18
RNU1-88P-201ENST00000459274 PNISRQ8TF01 805 aaKnown RBP7.71□□□□□ -1.18
RNU1-88P-201ENST00000459274 SLAIN2Q9P270 581 aa7.71□□□□□ -1.18
RNU1-88P-201ENST00000459274 ZNF335Q9H4Z2 1342 aaPredicted RBP7.71□□□□□ -1.18
RNU1-88P-201ENST00000459274 POLR3AO14802 1390 aaPredicted RBP7.71□□□□□ -1.18
RNU1-88P-201ENST00000459274 NEFLP07196 543 aa7.7□□□□□ -1.18
RNU1-88P-201ENST00000459274 U2AF1L5P0DN76 240 aaPredicted RBP7.7□□□□□ -1.18
RNU1-88P-201ENST00000459274 U2AF1Q01081 240 aaKnown RBP eCLIP7.7□□□□□ -1.18
RNU1-88P-201ENST00000459274 NME9Q86XW9 330 aa7.7□□□□□ -1.18
RNU1-88P-201ENST00000459274 PRR36Q9H6K5 1346 aa7.7□□□□□ -1.18
RNU1-88P-201ENST00000459274 ZBTB7CA1YPR0 619 aa7.69□□□□□ -1.18
RNU1-88P-201ENST00000459274 SOX12O15370 315 aa7.69□□□□□ -1.18
RNU1-88P-201ENST00000459274 PCDH10Q9P2E7 1040 aa7.69□□□□□ -1.18
RNU1-88P-201ENST00000459274 DSG3P32926 999 aa7.68□□□□□ -1.18
RNU1-88P-201ENST00000459274 PDE3BQ13370 1112 aa7.68□□□□□ -1.18
RNU1-88P-201ENST00000459274 ORAI2Q96SN7 254 aa7.68□□□□□ -1.18
RNU1-88P-201ENST00000459274 STRCP1A6NGW2 1772 aa7.68□□□□□ -1.18
RNU1-88P-201ENST00000459274 AATKQ6ZMQ8 1374 aa7.68□□□□□ -1.18
RNU1-88P-201ENST00000459274 SMG6Q86US8 1419 aaKnown RBP7.68□□□□□ -1.18
RNU1-88P-201ENST00000459274 C1orf167Q5SNV9 1468 aa7.68□□□□□ -1.18
RNU1-88P-201ENST00000459274 CD163L1Q9NR16 1453 aa7.68□□□□□ -1.18
RNU1-88P-201ENST00000459274 PLEKHG5O94827 1062 aa7.67□□□□□ -1.18
RNU1-88P-201ENST00000459274 NUTM2GQ5VZR2 741 aa7.67□□□□□ -1.18
RNU1-88P-201ENST00000459274 RUNDC1Q96C34 613 aa7.67□□□□□ -1.18
RNU1-88P-201ENST00000459274 ADAMTS8Q9UP79 889 aa7.67□□□□□ -1.18
RNU1-88P-201ENST00000459274 ARHGEF10O15013 1369 aa7.67□□□□□ -1.18
RNU1-88P-201ENST00000459274 INSRP06213 1382 aa7.67□□□□□ -1.18
RNU1-88P-201ENST00000459274 LRRC7Q96NW7 1537 aa7.67□□□□□ -1.18
RNU1-88P-201ENST00000459274 POTEMA6NI47 508 aa7.66□□□□□ -1.18
RNU1-88P-201ENST00000459274 FCHSD2O94868 740 aa7.66□□□□□ -1.18
RNU1-88P-201ENST00000459274 CALD1Q05682 793 aaKnown RBP7.66□□□□□ -1.18
RNU1-88P-201ENST00000459274 CCDC184Q52MB2 194 aa7.66□□□□□ -1.18
RNU1-88P-201ENST00000459274 LRRC59Q96AG4 307 aaKnown RBP7.66□□□□□ -1.18
RNU1-88P-201ENST00000459274 ZBED9Q6R2W3 1325 aa7.66□□□□□ -1.18
RNU1-88P-201ENST00000459274 XPCQ01831 940 aaPredicted RBP7.65□□□□□ -1.18
RNU1-88P-201ENST00000459274 LMOD3Q0VAK6 560 aa7.65□□□□□ -1.18
RNU1-88P-201ENST00000459274 KIF24Q5T7B8 1368 aa7.65□□□□□ -1.18
RNU1-88P-201ENST00000459274 XIRP1Q702N8 1843 aaKnown RBP7.65□□□□□ -1.18
RNU1-88P-201ENST00000459274 USP31Q70CQ4 1352 aa7.65□□□□□ -1.18
RNU1-88P-201ENST00000459274 POLKQ9UBT6 870 aa7.65□□□□□ -1.18
RNU1-88P-201ENST00000459274 SALL2Q9Y467 1007 aaPredicted RBP7.65□□□□□ -1.18
RNU1-88P-201ENST00000459274 MST1RQ04912 1400 aa7.64□□□□□ -1.19
RNU1-88P-201ENST00000459274 SBNO1A3KN83 1393 aa7.64□□□□□ -1.19
RNU1-88P-201ENST00000459274 FLT4P35916 1363 aa7.64□□□□□ -1.19
RNU1-88P-201ENST00000459274 HAX1O00165 279 aa7.64□□□□□ -1.19
RNU1-88P-201ENST00000459274 RRS1Q15050 365 aaKnown RBP7.64□□□□□ -1.19
RNU1-88P-201ENST00000459274 LTN1O94822 1766 aa7.64□□□□□ -1.19
RNU1-88P-201ENST00000459274 NRKQ7Z2Y5 1582 aa7.63□□□□□ -1.19
RNU1-88P-201ENST00000459274 GCP02774 474 aa7.63□□□□□ -1.19
RNU1-88P-201ENST00000459274 CSB-PGBD3P0DP91 1061 aa7.63□□□□□ -1.19
RNU1-88P-201ENST00000459274 EVA1CP58658 441 aa7.63□□□□□ -1.19
RNU1-88P-201ENST00000459274 GOLGA2Q08379 1002 aa7.63□□□□□ -1.19
RNU1-88P-201ENST00000459274 NEUROD2Q15784 382 aa7.63□□□□□ -1.19
RNU1-88P-201ENST00000459274 BRINP3Q76B58 766 aa7.63□□□□□ -1.19
RNU1-88P-201ENST00000459274 CCDC146Q8IYE0 955 aa7.63□□□□□ -1.19
RNU1-88P-201ENST00000459274 RTF1Q92541 710 aaKnown RBP7.63□□□□□ -1.19
RNU1-88P-201ENST00000459274 EMILIN1Q9Y6C2 1016 aa7.63□□□□□ -1.19
RNU1-88P-201ENST00000459274 CDK12Q9NYV4 1490 aaPredicted RBP7.62□□□□□ -1.19
RNU1-88P-201ENST00000459274 UBAP1LF5GYI3 381 aa7.62□□□□□ -1.19
RNU1-88P-201ENST00000459274 APAF1O14727 1248 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms