RNA–Protein interactions for RNA: ENST00000456842.1

SMIM12-205, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-205ENST00000456842 TRPM1Q7Z4N2 1603 aa37.94■■■■□ 3.66
SMIM12-205ENST00000456842 POLR3AO14802 1390 aaPredicted RBP37.93■■■■□ 3.66
SMIM12-205ENST00000456842 ITSN1Q15811 1721 aa37.93■■■■□ 3.66
SMIM12-205ENST00000456842 RALGAPBQ86X10 1494 aa37.92■■■■□ 3.66
SMIM12-205ENST00000456842 CCDC9Q9Y3X0 531 aaKnown RBP37.9■■■■□ 3.66
SMIM12-205ENST00000456842 VPS72Q15906 364 aa37.89■■■■□ 3.66
SMIM12-205ENST00000456842 TOPAZ1Q8N9V7 1692 aa37.88■■■■□ 3.66
SMIM12-205ENST00000456842 PPIP5K1Q6PFW1 1433 aa37.88■■■■□ 3.66
SMIM12-205ENST00000456842 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.88■■■■□ 3.65
SMIM12-205ENST00000456842 QRICH2Q9H0J4 1663 aa37.88■■■■□ 3.65
SMIM12-205ENST00000456842 BTG4Q9NY30 223 aa37.87■■■■□ 3.65
SMIM12-205ENST00000456842 GLI3P10071 1580 aa37.87■■■■□ 3.65
SMIM12-205ENST00000456842 ATAD2Q6PL18 1390 aa37.86■■■■□ 3.65
SMIM12-205ENST00000456842 CABP1Q9NZU7 370 aa37.85■■■■□ 3.65
SMIM12-205ENST00000456842 PLCH1Q4KWH8 1693 aa37.84■■■■□ 3.65
SMIM12-205ENST00000456842 TONSLQ96HA7 1378 aa37.83■■■■□ 3.65
SMIM12-205ENST00000456842 EVC2Q86UK5 1308 aa37.82■■■■□ 3.64
SMIM12-205ENST00000456842 PRDM11Q9NQV5 511 aa37.81■■■■□ 3.64
SMIM12-205ENST00000456842 ABTB2Q8N961 1025 aa37.8■■■■□ 3.64
SMIM12-205ENST00000456842 ZC3H6P61129 1189 aaKnown RBP37.79■■■■□ 3.64
SMIM12-205ENST00000456842 SEPT12Q8IYM1 358 aa37.79■■■■□ 3.64
SMIM12-205ENST00000456842 CHRNA2Q15822 529 aa37.78■■■■□ 3.64
SMIM12-205ENST00000456842 NWD2Q9ULI1 1742 aa37.78■■■■□ 3.64
SMIM12-205ENST00000456842 CARD11Q9BXL7 1154 aa37.77■■■■□ 3.64
SMIM12-205ENST00000456842 KIAA0232Q92628 1395 aa37.77■■■■□ 3.64
SMIM12-205ENST00000456842 CRYBG1Q9Y4K1 1723 aa37.76■■■■□ 3.64
SMIM12-205ENST00000456842 COL14A1Q05707 1796 aaKnown RBP37.73■■■■□ 3.63
SMIM12-205ENST00000456842 ONECUT3O60422 494 aaPredicted RBP37.71■■■■□ 3.63
SMIM12-205ENST00000456842 FAM98CQ17RN3 349 aaKnown RBP37.7■■■■□ 3.63
SMIM12-205ENST00000456842 NRAPQ86VF7 1730 aa37.69■■■■□ 3.62
SMIM12-205ENST00000456842 A0A0G2JS52 829 aa37.68■■■■□ 3.62
SMIM12-205ENST00000456842 MYT1Q01538 1121 aa37.68■■■■□ 3.62
SMIM12-205ENST00000456842 NLRP13Q86W25 1043 aa37.67■■■■□ 3.62
SMIM12-205ENST00000456842 USP6P35125 1406 aa37.67■■■■□ 3.62
SMIM12-205ENST00000456842 PHRF1Q9P1Y6 1649 aaKnown RBP37.66■■■■□ 3.62
SMIM12-205ENST00000456842 USP19O94966 1318 aa37.65■■■■□ 3.62
SMIM12-205ENST00000456842 STRN4Q9NRL3 753 aa37.65■■■■□ 3.62
SMIM12-205ENST00000456842 SPATA31A5Q5VU36 1347 aa37.64■■■■□ 3.62
SMIM12-205ENST00000456842 SPATA31A7Q8IWB4 1347 aa37.64■■■■□ 3.62
SMIM12-205ENST00000456842 GCP02774 474 aa37.62■■■■□ 3.61
SMIM12-205ENST00000456842 NLRP6P59044 892 aa37.62■■■■□ 3.61
SMIM12-205ENST00000456842 BRD4O60885 1362 aaPredicted RBP37.61■■■■□ 3.61
SMIM12-205ENST00000456842 KRT27Q7Z3Y8 459 aa37.61■■■■□ 3.61
SMIM12-205ENST00000456842 BRWD3Q6RI45 1802 aa37.6■■■■□ 3.61
SMIM12-205ENST00000456842 SSH2Q76I76 1423 aa37.59■■■■□ 3.61
SMIM12-205ENST00000456842 NRKQ7Z2Y5 1582 aa37.58■■■■□ 3.61
SMIM12-205ENST00000456842 ZBTB7CA1YPR0 619 aa37.56■■■■□ 3.6
SMIM12-205ENST00000456842 EVA1CP58658 441 aa37.56■■■■□ 3.6
SMIM12-205ENST00000456842 ZNF692Q9BU19 519 aaPredicted RBP37.56■■■■□ 3.6
SMIM12-205ENST00000456842 SBNO2Q9Y2G9 1366 aa37.55■■■■□ 3.6
SMIM12-205ENST00000456842 CCDC125Q86Z20 511 aa37.55■■■■□ 3.6
SMIM12-205ENST00000456842 TTC21BQ7Z4L5 1316 aa37.55■■■■□ 3.6
SMIM12-205ENST00000456842 CPDO75976 1380 aa37.55■■■■□ 3.6
SMIM12-205ENST00000456842 SPATA31A1Q5TZJ5 1347 aa37.54■■■■□ 3.6
SMIM12-205ENST00000456842 EP400Q96L91 3159 aa37.53■■■■□ 3.6
SMIM12-205ENST00000456842 USP35Q9P2H5 1018 aa37.52■■■■□ 3.6
SMIM12-205ENST00000456842 CAMTA1Q9Y6Y1 1673 aa37.51■■■■□ 3.6
SMIM12-205ENST00000456842 FAM182BQ5T319 152 aa37.5■■■■□ 3.59
SMIM12-205ENST00000456842 LARP1Q6PKG0 1096 aaKnown RBP37.5■■■■□ 3.59
SMIM12-205ENST00000456842 TMC1Q8TDI8 760 aa37.49■■■■□ 3.59
SMIM12-205ENST00000456842 PCGF6Q9BYE7 350 aa37.49■■■■□ 3.59
SMIM12-205ENST00000456842 BLMP54132 1417 aaPredicted RBP37.48■■■■□ 3.59
SMIM12-205ENST00000456842 CPSF1Q10570 1443 aaKnown RBP37.48■■■■□ 3.59
SMIM12-205ENST00000456842 KTN1Q86UP2 1357 aaKnown RBP37.48■■■■□ 3.59
SMIM12-205ENST00000456842 ST20-MTHFSA0A0A6YYL1 179 aa37.46■■■■□ 3.59
SMIM12-205ENST00000456842 DEFB132Q7Z7B7 95 aa37.46■■■■□ 3.59
SMIM12-205ENST00000456842 SOX12O15370 315 aa37.45■■■■□ 3.59
SMIM12-205ENST00000456842 SLC12A5Q9H2X9 1139 aa37.45■■■■□ 3.59
SMIM12-205ENST00000456842 PIK3C2AO00443 1686 aa37.44■■■■□ 3.58
SMIM12-205ENST00000456842 SLIT3O75094 1523 aa37.43■■■■□ 3.58
SMIM12-205ENST00000456842 TTC21AQ8NDW8 1320 aa37.42■■■■□ 3.58
SMIM12-205ENST00000456842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.42■■■■□ 3.58
SMIM12-205ENST00000456842 TESK2Q96S53 571 aa37.42■■■■□ 3.58
SMIM12-205ENST00000456842 ZRANB1Q9UGI0 708 aa37.42■■■■□ 3.58
SMIM12-205ENST00000456842 LMO7Q8WWI1 1683 aa37.41■■■■□ 3.58
SMIM12-205ENST00000456842 SF3B2Q13435 895 aaKnown RBP37.41■■■■□ 3.58
SMIM12-205ENST00000456842 AKAP12Q02952 1782 aa37.4■■■■□ 3.58
SMIM12-205ENST00000456842 THSD7AQ9UPZ6 1657 aa37.38■■■■□ 3.57
SMIM12-205ENST00000456842 CD163L1Q9NR16 1453 aa37.38■■■■□ 3.57
SMIM12-205ENST00000456842 TCP11L2Q8N4U5 519 aa37.37■■■■□ 3.57
SMIM12-205ENST00000456842 AATKQ6ZMQ8 1374 aa37.37■■■■□ 3.57
SMIM12-205ENST00000456842 COL5A2P05997 1499 aaPredicted RBP37.36■■■■□ 3.57
SMIM12-205ENST00000456842 BARGINQ6ZT62 677 aa37.35■■■■□ 3.57
SMIM12-205ENST00000456842 AXIN2Q9Y2T1 843 aa37.35■■■■□ 3.57
SMIM12-205ENST00000456842 HDGFL2Q7Z4V5 671 aaPredicted RBP37.34■■■■□ 3.57
SMIM12-205ENST00000456842 ARHGEF25Q86VW2 580 aa37.34■■■■□ 3.57
SMIM12-205ENST00000456842 NME9Q86XW9 330 aa37.34■■■■□ 3.57
SMIM12-205ENST00000456842 KCNH5Q8NCM2 988 aa37.34■■■■□ 3.57
SMIM12-205ENST00000456842 PUS7Q96PZ0 661 aaKnown RBP37.31■■■■□ 3.56
SMIM12-205ENST00000456842 TERF2IPQ9NYB0 399 aa37.28■■■■□ 3.56
SMIM12-205ENST00000456842 MON2Q7Z3U7 1717 aa37.27■■■■□ 3.56
SMIM12-205ENST00000456842 A0A1W2PP64 1363 aa37.27■■■■□ 3.56
SMIM12-205ENST00000456842 USP47Q96K76 1375 aa37.27■■■■□ 3.56
SMIM12-205ENST00000456842 PDE3BQ13370 1112 aa37.26■■■■□ 3.56
SMIM12-205ENST00000456842 TOM1L2Q6ZVM7 507 aa37.26■■■■□ 3.56
SMIM12-205ENST00000456842 THRAP3Q9Y2W1 955 aaKnown RBP37.26■■■■□ 3.56
SMIM12-205ENST00000456842 CRB1P82279 1406 aa37.26■■■■□ 3.55
SMIM12-205ENST00000456842 USP31Q70CQ4 1352 aa37.25■■■■□ 3.55
SMIM12-205ENST00000456842 COL18A1P39060 1754 aa37.24■■■■□ 3.55
SMIM12-205ENST00000456842 BAG6P46379 1132 aa37.23■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms