RNA–Protein interactions for RNA: ENST00000456554.2

SNX18P4-201, Transcript of sorting nexin 18 pseudogene 4, humanhuman

BASIC

Gene SNX18P4, Length 838 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18P4-201ENST00000456554 USP31Q70CQ4 1352 aa12.02□□□□□ -0.49
SNX18P4-201ENST00000456554 HDGFL2Q7Z4V5 671 aaPredicted RBP12.01□□□□□ -0.49
SNX18P4-201ENST00000456554 PANK3Q9H999 370 aa12.01□□□□□ -0.49
SNX18P4-201ENST00000456554 NPHP3Q7Z494 1330 aa12.01□□□□□ -0.49
SNX18P4-201ENST00000456554 PXDNQ92626 1479 aa12.01□□□□□ -0.49
SNX18P4-201ENST00000456554 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
SNX18P4-201ENST00000456554 ORAI2Q96SN7 254 aa12□□□□□ -0.49
SNX18P4-201ENST00000456554 ESCO1Q5FWF5 840 aa11.99□□□□□ -0.49
SNX18P4-201ENST00000456554 ALS2Q96Q42 1657 aa11.99□□□□□ -0.49
SNX18P4-201ENST00000456554 ANKRD26Q9UPS8 1709 aa11.98□□□□□ -0.49
SNX18P4-201ENST00000456554 ROBO1Q9Y6N7 1651 aa11.98□□□□□ -0.49
SNX18P4-201ENST00000456554 PSME1Q06323 249 aa11.98□□□□□ -0.49
SNX18P4-201ENST00000456554 CGNL1Q0VF96 1302 aa11.97□□□□□ -0.49
SNX18P4-201ENST00000456554 TTC21BQ7Z4L5 1316 aa11.97□□□□□ -0.49
SNX18P4-201ENST00000456554 MED1Q15648 1581 aaPredicted RBP11.96□□□□□ -0.49
SNX18P4-201ENST00000456554 FYB1O15117 783 aa11.96□□□□□ -0.49
SNX18P4-201ENST00000456554 DDX10Q13206 875 aaKnown RBP11.96□□□□□ -0.49
SNX18P4-201ENST00000456554 NGDNQ8NEJ9 315 aaKnown RBP11.96□□□□□ -0.49
SNX18P4-201ENST00000456554 TMC1Q8TDI8 760 aa11.96□□□□□ -0.49
SNX18P4-201ENST00000456554 KNSTRNQ9Y448 316 aa11.96□□□□□ -0.49
SNX18P4-201ENST00000456554 NSD3Q9BZ95 1437 aa11.95□□□□□ -0.5
SNX18P4-201ENST00000456554 SPATA31A3Q5VYP0 1347 aa11.95□□□□□ -0.5
SNX18P4-201ENST00000456554 FOXO3O43524 673 aa11.95□□□□□ -0.5
SNX18P4-201ENST00000456554 OVOS2A0A0J9YW53 1432 aa11.94□□□□□ -0.5
SNX18P4-201ENST00000456554 OVOS2Q6IE36 1432 aa11.94□□□□□ -0.5
SNX18P4-201ENST00000456554 MARF1Q9Y4F3 1742 aaKnown RBP11.94□□□□□ -0.5
SNX18P4-201ENST00000456554 ARHGEF10O15013 1369 aa11.94□□□□□ -0.5
SNX18P4-201ENST00000456554 AATKQ6ZMQ8 1374 aa11.94□□□□□ -0.5
SNX18P4-201ENST00000456554 PARD3Q8TEW0 1356 aa11.94□□□□□ -0.5
SNX18P4-201ENST00000456554 COL22A1Q8NFW1 1626 aaPredicted RBP11.94□□□□□ -0.5
SNX18P4-201ENST00000456554 RALBP1Q15311 655 aa11.94□□□□□ -0.5
SNX18P4-201ENST00000456554 KRT28Q7Z3Y7 464 aa11.94□□□□□ -0.5
SNX18P4-201ENST00000456554 PMFBP1Q8TBY8 1022 aa11.94□□□□□ -0.5
SNX18P4-201ENST00000456554 KIF20BQ96Q89 1820 aa11.94□□□□□ -0.5
SNX18P4-201ENST00000456554 PIK3C2AO00443 1686 aa11.94□□□□□ -0.5
SNX18P4-201ENST00000456554 COL16A1Q07092 1604 aaPredicted RBP11.93□□□□□ -0.5
SNX18P4-201ENST00000456554 KIF24Q5T7B8 1368 aa11.93□□□□□ -0.5
SNX18P4-201ENST00000456554 USP19O94966 1318 aa11.93□□□□□ -0.5
SNX18P4-201ENST00000456554 SLIT3O75094 1523 aa11.93□□□□□ -0.5
SNX18P4-201ENST00000456554 LRRC59Q96AG4 307 aaKnown RBP11.93□□□□□ -0.5
SNX18P4-201ENST00000456554 CRYBG1Q9Y4K1 1723 aa11.93□□□□□ -0.5
SNX18P4-201ENST00000456554 TNS3Q68CZ2 1445 aa11.93□□□□□ -0.5
SNX18P4-201ENST00000456554 PHRF1Q9P1Y6 1649 aaKnown RBP11.93□□□□□ -0.5
SNX18P4-201ENST00000456554 INSRP06213 1382 aa11.92□□□□□ -0.5
SNX18P4-201ENST00000456554 NUTM2FA1L443 756 aa11.92□□□□□ -0.5
SNX18P4-201ENST00000456554 UBAP1LF5GYI3 381 aa11.92□□□□□ -0.5
SNX18P4-201ENST00000456554 PRKRIP1Q9H875 184 aaPredicted RBP11.91□□□□□ -0.5
SNX18P4-201ENST00000456554 ABCC6O95255 1503 aa11.91□□□□□ -0.5
SNX18P4-201ENST00000456554 SMG6Q86US8 1419 aaKnown RBP11.9□□□□□ -0.5
SNX18P4-201ENST00000456554 NLRP13Q86W25 1043 aa11.9□□□□□ -0.5
SNX18P4-201ENST00000456554 SHPRHQ149N8 1683 aa11.89□□□□□ -0.51
SNX18P4-201ENST00000456554 PNPLA6Q8IY17 1366 aa11.89□□□□□ -0.51
SNX18P4-201ENST00000456554 PHLPP1O60346 1717 aa11.89□□□□□ -0.51
SNX18P4-201ENST00000456554 DIEXFQ68CQ4 756 aaKnown RBP11.88□□□□□ -0.51
SNX18P4-201ENST00000456554 KCNH5Q8NCM2 988 aa11.88□□□□□ -0.51
SNX18P4-201ENST00000456554 CPDO75976 1380 aa11.88□□□□□ -0.51
SNX18P4-201ENST00000456554 NFAT5O94916 1531 aa11.87□□□□□ -0.51
SNX18P4-201ENST00000456554 ABTB2Q8N961 1025 aa11.87□□□□□ -0.51
SNX18P4-201ENST00000456554 FBXO41Q8TF61 875 aa11.87□□□□□ -0.51
SNX18P4-201ENST00000456554 NME9Q86XW9 330 aa11.86□□□□□ -0.51
SNX18P4-201ENST00000456554 COG3Q96JB2 828 aa11.86□□□□□ -0.51
SNX18P4-201ENST00000456554 POLR3GLQ9BT43 218 aa11.86□□□□□ -0.51
SNX18P4-201ENST00000456554 MAP2P11137 1827 aaKnown RBP11.86□□□□□ -0.51
SNX18P4-201ENST00000456554 JCADQ9P266 1359 aa11.85□□□□□ -0.51
SNX18P4-201ENST00000456554 CCER2I3L3R5 266 aa11.85□□□□□ -0.51
SNX18P4-201ENST00000456554 ABCA3Q99758 1704 aa11.85□□□□□ -0.51
SNX18P4-201ENST00000456554 NLRP6P59044 892 aa11.84□□□□□ -0.51
SNX18P4-201ENST00000456554 SPATA31A6Q5VVP1 1343 aa11.84□□□□□ -0.51
SNX18P4-201ENST00000456554 MYBBP1AQ9BQG0 1328 aaKnown RBP11.84□□□□□ -0.51
SNX18P4-201ENST00000456554 RTL1A6NKG5 1358 aa11.83□□□□□ -0.52
SNX18P4-201ENST00000456554 COL18A1P39060 1754 aa11.83□□□□□ -0.52
SNX18P4-201ENST00000456554 ANP32CO43423 234 aa11.83□□□□□ -0.52
SNX18P4-201ENST00000456554 GCP02774 474 aa11.83□□□□□ -0.52
SNX18P4-201ENST00000456554 MORC1Q86VD1 984 aa11.83□□□□□ -0.52
SNX18P4-201ENST00000456554 ARHGEF25Q86VW2 580 aa11.83□□□□□ -0.52
SNX18P4-201ENST00000456554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.83□□□□□ -0.52
SNX18P4-201ENST00000456554 GGNBP2Q9H3C7 697 aa11.83□□□□□ -0.52
SNX18P4-201ENST00000456554 PPP2R1AP30153 589 aa11.82□□□□□ -0.52
SNX18P4-201ENST00000456554 DDX17Q92841 729 aaKnown RBP11.82□□□□□ -0.52
SNX18P4-201ENST00000456554 POLKQ9UBT6 870 aa11.82□□□□□ -0.52
SNX18P4-201ENST00000456554 CDK12Q9NYV4 1490 aaPredicted RBP11.82□□□□□ -0.52
SNX18P4-201ENST00000456554 PLEKHG2Q9H7P9 1386 aa11.81□□□□□ -0.52
SNX18P4-201ENST00000456554 BLMP54132 1417 aaPredicted RBP11.8□□□□□ -0.52
SNX18P4-201ENST00000456554 PAK3O75914 559 aaPredicted RBP11.8□□□□□ -0.52
SNX18P4-201ENST00000456554 LMO7Q8WWI1 1683 aa11.8□□□□□ -0.52
SNX18P4-201ENST00000456554 PIP4K2BP78356 416 aa11.79□□□□□ -0.52
SNX18P4-201ENST00000456554 XPCQ01831 940 aaPredicted RBP11.79□□□□□ -0.52
SNX18P4-201ENST00000456554 CC2D1BQ5T0F9 858 aaKnown RBP11.79□□□□□ -0.52
SNX18P4-201ENST00000456554 IP6K1Q92551 441 aa11.79□□□□□ -0.52
SNX18P4-201ENST00000456554 ZRANB1Q9UGI0 708 aa11.79□□□□□ -0.52
SNX18P4-201ENST00000456554 FLT4P35916 1363 aa11.79□□□□□ -0.52
SNX18P4-201ENST00000456554 NCAPD2Q15021 1401 aa11.78□□□□□ -0.52
SNX18P4-201ENST00000456554 COL3A1P02461 1466 aaPredicted RBP11.78□□□□□ -0.52
SNX18P4-201ENST00000456554 LTN1O94822 1766 aa11.78□□□□□ -0.52
SNX18P4-201ENST00000456554 HSPA1LP34931 641 aa11.78□□□□□ -0.52
SNX18P4-201ENST00000456554 MAP3K19Q56UN5 1328 aa11.78□□□□□ -0.52
SNX18P4-201ENST00000456554 MTHFSP49914 203 aa11.77□□□□□ -0.53
SNX18P4-201ENST00000456554 PEAK1Q9H792 1746 aa11.77□□□□□ -0.53
SNX18P4-201ENST00000456554 NWD2Q9ULI1 1742 aa11.77□□□□□ -0.53
SNX18P4-201ENST00000456554 COL14A1Q05707 1796 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms