RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 NRAPQ86VF7 1730 aa16.93■□□□□ 0.3
TMEM56-202ENST00000455656 SRPK2P78362 688 aaKnown RBP16.92■□□□□ 0.3
TMEM56-202ENST00000455656 CARD11Q9BXL7 1154 aa16.92■□□□□ 0.3
TMEM56-202ENST00000455656 QTRT2Q9H974 415 aaKnown RBP16.92■□□□□ 0.3
TMEM56-202ENST00000455656 USP21Q9UK80 565 aa16.92■□□□□ 0.3
TMEM56-202ENST00000455656 RGS12O14924 1447 aa16.92■□□□□ 0.3
TMEM56-202ENST00000455656 RXRBP28702 533 aa16.91■□□□□ 0.3
TMEM56-202ENST00000455656 EVC2Q86UK5 1308 aa16.91■□□□□ 0.3
TMEM56-202ENST00000455656 CLSPNQ9HAW4 1339 aa16.91■□□□□ 0.3
TMEM56-202ENST00000455656 GLI3P10071 1580 aa16.9■□□□□ 0.3
TMEM56-202ENST00000455656 NRKQ7Z2Y5 1582 aa16.9■□□□□ 0.3
TMEM56-202ENST00000455656 COL14A1Q05707 1796 aaKnown RBP16.9■□□□□ 0.3
TMEM56-202ENST00000455656 LMOD2Q6P5Q4 547 aa16.9■□□□□ 0.3
TMEM56-202ENST00000455656 SSH2Q76I76 1423 aa16.89■□□□□ 0.29
TMEM56-202ENST00000455656 RBM6P78332 1123 aaKnown RBP16.89■□□□□ 0.29
TMEM56-202ENST00000455656 USP6P35125 1406 aa16.88■□□□□ 0.29
TMEM56-202ENST00000455656 PIK3C2AO00443 1686 aa16.88■□□□□ 0.29
TMEM56-202ENST00000455656 MON2Q7Z3U7 1717 aa16.88■□□□□ 0.29
TMEM56-202ENST00000455656 TRPC5Q9UL62 973 aaPredicted RBP16.88■□□□□ 0.29
TMEM56-202ENST00000455656 PLEKHG5O94827 1062 aa16.87■□□□□ 0.29
TMEM56-202ENST00000455656 CABP1Q9NZU7 370 aa16.87■□□□□ 0.29
TMEM56-202ENST00000455656 FAM83GA6ND36 823 aa16.86■□□□□ 0.29
TMEM56-202ENST00000455656 PAK3O75914 559 aaPredicted RBP16.86■□□□□ 0.29
TMEM56-202ENST00000455656 UNC5CLQ8IV45 518 aa16.85■□□□□ 0.29
TMEM56-202ENST00000455656 BRD4O60885 1362 aaPredicted RBP16.85■□□□□ 0.29
TMEM56-202ENST00000455656 CPSF1Q10570 1443 aaKnown RBP16.85■□□□□ 0.29
TMEM56-202ENST00000455656 CD163L1Q9NR16 1453 aa16.85■□□□□ 0.29
TMEM56-202ENST00000455656 TESK2Q96S53 571 aa16.84■□□□□ 0.29
TMEM56-202ENST00000455656 TIMELESSQ9UNS1 1208 aa16.84■□□□□ 0.29
TMEM56-202ENST00000455656 USP19O94966 1318 aa16.84■□□□□ 0.29
TMEM56-202ENST00000455656 ATAD2Q6PL18 1390 aa16.84■□□□□ 0.29
TMEM56-202ENST00000455656 LMO7Q8WWI1 1683 aa16.84■□□□□ 0.29
TMEM56-202ENST00000455656 SLIT3O75094 1523 aa16.83■□□□□ 0.28
TMEM56-202ENST00000455656 HAP1P54257 671 aaPredicted RBP16.83■□□□□ 0.28
TMEM56-202ENST00000455656 BRWD3Q6RI45 1802 aa16.83■□□□□ 0.28
TMEM56-202ENST00000455656 NUTM2GQ5VZR2 741 aa16.82■□□□□ 0.28
TMEM56-202ENST00000455656 GJD4Q96KN9 370 aaPredicted RBP16.82■□□□□ 0.28
TMEM56-202ENST00000455656 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
TMEM56-202ENST00000455656 ST20-MTHFSA0A0A6YYL1 179 aa16.81■□□□□ 0.28
TMEM56-202ENST00000455656 KIAA0232Q92628 1395 aa16.8■□□□□ 0.28
TMEM56-202ENST00000455656 ABTB2Q8N961 1025 aa16.8■□□□□ 0.28
TMEM56-202ENST00000455656 VPS72Q15906 364 aa16.79■□□□□ 0.28
TMEM56-202ENST00000455656 COL18A1P39060 1754 aa16.79■□□□□ 0.28
TMEM56-202ENST00000455656 USP47Q96K76 1375 aa16.78■□□□□ 0.28
TMEM56-202ENST00000455656 PUS7Q96PZ0 661 aaKnown RBP16.78■□□□□ 0.28
TMEM56-202ENST00000455656 CPDO75976 1380 aa16.77■□□□□ 0.28
TMEM56-202ENST00000455656 UPF1Q92900 1129 aaKnown RBP eCLIP16.77■□□□□ 0.28
TMEM56-202ENST00000455656 BTG4Q9NY30 223 aa16.77■□□□□ 0.28
TMEM56-202ENST00000455656 CAMTA1Q9Y6Y1 1673 aa16.77■□□□□ 0.28
TMEM56-202ENST00000455656 TTC21BQ7Z4L5 1316 aa16.76■□□□□ 0.27
TMEM56-202ENST00000455656 ZNF692Q9BU19 519 aaPredicted RBP16.76■□□□□ 0.27
TMEM56-202ENST00000455656 ZC3H6P61129 1189 aaKnown RBP16.75■□□□□ 0.27
TMEM56-202ENST00000455656 NLRP13Q86W25 1043 aa16.75■□□□□ 0.27
TMEM56-202ENST00000455656 PRDM11Q9NQV5 511 aa16.75■□□□□ 0.27
TMEM56-202ENST00000455656 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
TMEM56-202ENST00000455656 THSD7AQ9UPZ6 1657 aa16.75■□□□□ 0.27
TMEM56-202ENST00000455656 ONECUT3O60422 494 aaPredicted RBP16.74■□□□□ 0.27
TMEM56-202ENST00000455656 GCP02774 474 aa16.74■□□□□ 0.27
TMEM56-202ENST00000455656 CHRNA2Q15822 529 aa16.74■□□□□ 0.27
TMEM56-202ENST00000455656 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
TMEM56-202ENST00000455656 MYOM1P52179 1685 aa16.74■□□□□ 0.27
TMEM56-202ENST00000455656 NFAT5O94916 1531 aa16.74■□□□□ 0.27
TMEM56-202ENST00000455656 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
TMEM56-202ENST00000455656 TTC21AQ8NDW8 1320 aa16.73■□□□□ 0.27
TMEM56-202ENST00000455656 CCER1Q8TC90 406 aaPredicted RBP16.73■□□□□ 0.27
TMEM56-202ENST00000455656 A0A1W2PP64 1363 aa16.73■□□□□ 0.27
TMEM56-202ENST00000455656 NLRP6P59044 892 aa16.72■□□□□ 0.27
TMEM56-202ENST00000455656 SPATA31A5Q5VU36 1347 aa16.71■□□□□ 0.27
TMEM56-202ENST00000455656 SPATA31A7Q8IWB4 1347 aa16.71■□□□□ 0.27
TMEM56-202ENST00000455656 EP400Q96L91 3159 aa16.71■□□□□ 0.27
TMEM56-202ENST00000455656 USP31Q70CQ4 1352 aa16.71■□□□□ 0.27
TMEM56-202ENST00000455656 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
TMEM56-202ENST00000455656 COL5A2P05997 1499 aaPredicted RBP16.7■□□□□ 0.26
TMEM56-202ENST00000455656 NINLQ9Y2I6 1382 aa16.7■□□□□ 0.26
TMEM56-202ENST00000455656 TMC1Q8TDI8 760 aa16.69■□□□□ 0.26
TMEM56-202ENST00000455656 ZRANB1Q9UGI0 708 aa16.69■□□□□ 0.26
TMEM56-202ENST00000455656 LTN1O94822 1766 aa16.69■□□□□ 0.26
TMEM56-202ENST00000455656 SLC24A1O60721 1099 aa16.68■□□□□ 0.26
TMEM56-202ENST00000455656 SEPT12Q8IYM1 358 aa16.68■□□□□ 0.26
TMEM56-202ENST00000455656 WNK3Q9BYP7 1800 aa16.68■□□□□ 0.26
TMEM56-202ENST00000455656 SPATA31A1Q5TZJ5 1347 aa16.68■□□□□ 0.26
TMEM56-202ENST00000455656 AATKQ6ZMQ8 1374 aa16.67■□□□□ 0.26
TMEM56-202ENST00000455656 NME9Q86XW9 330 aa16.67■□□□□ 0.26
TMEM56-202ENST00000455656 CCDC9Q9Y3X0 531 aaKnown RBP16.67■□□□□ 0.26
TMEM56-202ENST00000455656 OVOS2A0A0J9YW53 1432 aa16.67■□□□□ 0.26
TMEM56-202ENST00000455656 OVOS2Q6IE36 1432 aa16.67■□□□□ 0.26
TMEM56-202ENST00000455656 TMF1P82094 1093 aa16.66■□□□□ 0.26
TMEM56-202ENST00000455656 FAM98CQ17RN3 349 aaKnown RBP16.66■□□□□ 0.26
TMEM56-202ENST00000455656 HDGFL2Q7Z4V5 671 aaPredicted RBP16.66■□□□□ 0.26
TMEM56-202ENST00000455656 ABCC6O95255 1503 aa16.65■□□□□ 0.26
TMEM56-202ENST00000455656 ANKRD36BQ8N2N9 1353 aa16.65■□□□□ 0.26
TMEM56-202ENST00000455656 ARHGEF25Q86VW2 580 aa16.65■□□□□ 0.26
TMEM56-202ENST00000455656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.65■□□□□ 0.262e-8■■■□□ 15.4
TMEM56-202ENST00000455656 STRN4Q9NRL3 753 aa16.65■□□□□ 0.26
TMEM56-202ENST00000455656 LARP1Q6PKG0 1096 aaKnown RBP16.64■□□□□ 0.25
TMEM56-202ENST00000455656 TERF2IPQ9NYB0 399 aa16.64■□□□□ 0.25
TMEM56-202ENST00000455656 AXIN2Q9Y2T1 843 aa16.64■□□□□ 0.25
TMEM56-202ENST00000455656 PARP4Q9UKK3 1724 aaKnown RBP16.64■□□□□ 0.25
TMEM56-202ENST00000455656 KIF20BQ96Q89 1820 aa16.63■□□□□ 0.25
TMEM56-202ENST00000455656 KCNH5Q8NCM2 988 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms