RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 SSH2Q76I76 1423 aa22.53■■□□□ 1.2
PDXDC1-204ENST00000455313 NME9Q86XW9 330 aa22.52■■□□□ 1.2
PDXDC1-204ENST00000455313 TTC21BQ7Z4L5 1316 aa22.51■■□□□ 1.19
PDXDC1-204ENST00000455313 PHF8Q9UPP1 1060 aa22.51■■□□□ 1.19
PDXDC1-204ENST00000455313 C1orf167Q5SNV9 1468 aa22.5■■□□□ 1.19
PDXDC1-204ENST00000455313 MSH6P52701 1360 aa22.49■■□□□ 1.19
PDXDC1-204ENST00000455313 ESCO1Q5FWF5 840 aa22.49■■□□□ 1.19
PDXDC1-204ENST00000455313 MST1RQ04912 1400 aa22.49■■□□□ 1.19
PDXDC1-204ENST00000455313 SCAF1Q9H7N4 1312 aaKnown RBP22.48■■□□□ 1.19
PDXDC1-204ENST00000455313 ATF3P18847 181 aa22.48■■□□□ 1.19
PDXDC1-204ENST00000455313 ZRANB1Q9UGI0 708 aa22.47■■□□□ 1.19
PDXDC1-204ENST00000455313 ORAI2Q96SN7 254 aa22.46■■□□□ 1.19
PDXDC1-204ENST00000455313 KIF1AQ12756 1690 aa22.46■■□□□ 1.19
PDXDC1-204ENST00000455313 TTC21AQ8NDW8 1320 aa22.46■■□□□ 1.19
PDXDC1-204ENST00000455313 OVOS2A0A0J9YW53 1432 aa22.46■■□□□ 1.19
PDXDC1-204ENST00000455313 OVOS2Q6IE36 1432 aa22.46■■□□□ 1.19
PDXDC1-204ENST00000455313 PIK3C2AO00443 1686 aa22.46■■□□□ 1.19
PDXDC1-204ENST00000455313 HNRNPUQ00839 825 aaKnown RBP eCLIP22.45■■□□□ 1.18
PDXDC1-204ENST00000455313 CADPS2Q86UW7 1296 aa22.45■■□□□ 1.18
PDXDC1-204ENST00000455313 MTHFSP49914 203 aa22.45■■□□□ 1.18
PDXDC1-204ENST00000455313 COG3Q96JB2 828 aa22.45■■□□□ 1.18
PDXDC1-204ENST00000455313 SHPRHQ149N8 1683 aa22.42■■□□□ 1.18
PDXDC1-204ENST00000455313 MAP2P11137 1827 aaKnown RBP22.41■■□□□ 1.18
PDXDC1-204ENST00000455313 USP54Q70EL1 1684 aa22.39■■□□□ 1.18
PDXDC1-204ENST00000455313 AATKQ6ZMQ8 1374 aa22.39■■□□□ 1.17
PDXDC1-204ENST00000455313 MARF1Q9Y4F3 1742 aaKnown RBP22.39■■□□□ 1.17
PDXDC1-204ENST00000455313 FOXO3O43524 673 aa22.39■■□□□ 1.17
PDXDC1-204ENST00000455313 WDR43Q15061 677 aaKnown RBP eCLIP22.39■■□□□ 1.17
PDXDC1-204ENST00000455313 USP31Q70CQ4 1352 aa22.38■■□□□ 1.17
PDXDC1-204ENST00000455313 FBLN1P23142 703 aa22.38■■□□□ 1.17
PDXDC1-204ENST00000455313 PSME1Q06323 249 aa22.38■■□□□ 1.17
PDXDC1-204ENST00000455313 CFAP53Q96M91 514 aa22.38■■□□□ 1.17
PDXDC1-204ENST00000455313 INSRP06213 1382 aa22.37■■□□□ 1.17
PDXDC1-204ENST00000455313 COL3A1P02461 1466 aaPredicted RBP22.37■■□□□ 1.17
PDXDC1-204ENST00000455313 BLMP54132 1417 aaPredicted RBP22.37■■□□□ 1.17
PDXDC1-204ENST00000455313 SMG6Q86US8 1419 aaKnown RBP22.37■■□□□ 1.17
PDXDC1-204ENST00000455313 PAK3O75914 559 aaPredicted RBP22.36■■□□□ 1.17
PDXDC1-204ENST00000455313 ADAMTS8Q9UP79 889 aa22.36■■□□□ 1.17
PDXDC1-204ENST00000455313 TRPM3Q9HCF6 1732 aaPredicted RBP22.36■■□□□ 1.17
PDXDC1-204ENST00000455313 POLKQ9UBT6 870 aa22.36■■□□□ 1.17
PDXDC1-204ENST00000455313 LTBP4Q8N2S1 1624 aa22.35■■□□□ 1.17
PDXDC1-204ENST00000455313 PNPLA6Q8IY17 1366 aa22.34■■□□□ 1.17
PDXDC1-204ENST00000455313 XPCQ01831 940 aaPredicted RBP22.33■■□□□ 1.17
PDXDC1-204ENST00000455313 ABTB2Q8N961 1025 aa22.33■■□□□ 1.17
PDXDC1-204ENST00000455313 EMILIN1Q9Y6C2 1016 aa22.33■■□□□ 1.17
PDXDC1-204ENST00000455313 NLRP6P59044 892 aa22.33■■□□□ 1.16
PDXDC1-204ENST00000455313 CDK12Q9NYV4 1490 aaPredicted RBP22.33■■□□□ 1.16
PDXDC1-204ENST00000455313 ZBED9Q6R2W3 1325 aa22.32■■□□□ 1.16
PDXDC1-204ENST00000455313 RRS1Q15050 365 aaKnown RBP22.32■■□□□ 1.16
PDXDC1-204ENST00000455313 NUTM2GQ5VZR2 741 aa22.31■■□□□ 1.16
PDXDC1-204ENST00000455313 PPM1GO15355 546 aaPredicted RBP22.31■■□□□ 1.16
PDXDC1-204ENST00000455313 GTF3C3Q9Y5Q9 886 aa22.31■■□□□ 1.16
PDXDC1-204ENST00000455313 KRT28Q7Z3Y7 464 aa22.3■■□□□ 1.16
PDXDC1-204ENST00000455313 SLAIN2Q9P270 581 aa22.29■■□□□ 1.16
PDXDC1-204ENST00000455313 SENP3-EIF4A1A0A087X0R7 540 aa22.29■■□□□ 1.16
PDXDC1-204ENST00000455313 BRINP3Q76B58 766 aa22.29■■□□□ 1.16
PDXDC1-204ENST00000455313 ALS2Q96Q42 1657 aa22.28■■□□□ 1.16
PDXDC1-204ENST00000455313 SOX12O15370 315 aa22.28■■□□□ 1.16
PDXDC1-204ENST00000455313 NPHP3Q7Z494 1330 aa22.28■■□□□ 1.16
PDXDC1-204ENST00000455313 PEAK1Q9H792 1746 aa22.28■■□□□ 1.16
PDXDC1-204ENST00000455313 DDX17Q92841 729 aaKnown RBP22.28■■□□□ 1.16
PDXDC1-204ENST00000455313 PXDNQ92626 1479 aa22.27■■□□□ 1.15
PDXDC1-204ENST00000455313 DIAPH1O60610 1272 aaKnown RBP22.25■■□□□ 1.15
PDXDC1-204ENST00000455313 AEBP2Q6ZN18 517 aaPredicted RBP22.25■■□□□ 1.15
PDXDC1-204ENST00000455313 MAP3K19Q56UN5 1328 aa22.24■■□□□ 1.15
PDXDC1-204ENST00000455313 NUDCQ9Y266 331 aa22.23■■□□□ 1.15
PDXDC1-204ENST00000455313 NFAT5O94916 1531 aa22.23■■□□□ 1.15
PDXDC1-204ENST00000455313 CCDC146Q8IYE0 955 aa22.23■■□□□ 1.15
PDXDC1-204ENST00000455313 SBNO1A3KN83 1393 aa22.23■■□□□ 1.15
PDXDC1-204ENST00000455313 U2AF1L5P0DN76 240 aaPredicted RBP22.22■■□□□ 1.15
PDXDC1-204ENST00000455313 U2AF1Q01081 240 aaKnown RBP eCLIP22.22■■□□□ 1.15
PDXDC1-204ENST00000455313 LMOD2Q6P5Q4 547 aa22.22■■□□□ 1.15
PDXDC1-204ENST00000455313 SLIT3O75094 1523 aa22.22■■□□□ 1.15
PDXDC1-204ENST00000455313 U2SURPO15042 1029 aaKnown RBP22.21■■□□□ 1.15
PDXDC1-204ENST00000455313 LTN1O94822 1766 aa22.21■■□□□ 1.15
PDXDC1-204ENST00000455313 TNS3Q68CZ2 1445 aa22.21■■□□□ 1.15
PDXDC1-204ENST00000455313 FLT4P35916 1363 aa22.19■■□□□ 1.14
PDXDC1-204ENST00000455313 NHSL1Q5SYE7 1610 aa22.19■■□□□ 1.14
PDXDC1-204ENST00000455313 USP19O94966 1318 aa22.19■■□□□ 1.14
PDXDC1-204ENST00000455313 IL13P35225 146 aa22.18■■□□□ 1.14
PDXDC1-204ENST00000455313 SALL2Q9Y467 1007 aaPredicted RBP22.18■■□□□ 1.14
PDXDC1-204ENST00000455313 KIF24Q5T7B8 1368 aa22.17■■□□□ 1.14
PDXDC1-204ENST00000455313 MED1Q15648 1581 aaPredicted RBP22.17■■□□□ 1.14
PDXDC1-204ENST00000455313 KCNH5Q8NCM2 988 aa22.17■■□□□ 1.14
PDXDC1-204ENST00000455313 HSP90AB2PQ58FF8 381 aa22.16■■□□□ 1.14
PDXDC1-204ENST00000455313 IQSEC2Q5JU85 1478 aa22.16■■□□□ 1.14
PDXDC1-204ENST00000455313 SOS2Q07890 1332 aaPredicted RBP22.16■■□□□ 1.14
PDXDC1-204ENST00000455313 SPATA31A3Q5VYP0 1347 aa22.16■■□□□ 1.14
PDXDC1-204ENST00000455313 PHRF1Q9P1Y6 1649 aaKnown RBP22.16■■□□□ 1.14
PDXDC1-204ENST00000455313 APAF1O14727 1248 aa22.15■■□□□ 1.14
PDXDC1-204ENST00000455313 AMPHP49418 695 aa22.15■■□□□ 1.14
PDXDC1-204ENST00000455313 RUNDC1Q96C34 613 aa22.15■■□□□ 1.14
PDXDC1-204ENST00000455313 ROBO1Q9Y6N7 1651 aa22.15■■□□□ 1.14
PDXDC1-204ENST00000455313 EIF4A2Q14240 407 aaKnown RBP22.15■■□□□ 1.14
PDXDC1-204ENST00000455313 GCP02774 474 aa22.14■■□□□ 1.13
PDXDC1-204ENST00000455313 CRYBG1Q9Y4K1 1723 aa22.14■■□□□ 1.13
PDXDC1-204ENST00000455313 RTL1A6NKG5 1358 aa22.14■■□□□ 1.13
PDXDC1-204ENST00000455313 ARHGEF10O15013 1369 aa22.13■■□□□ 1.13
PDXDC1-204ENST00000455313 RGPD1P0DJD0 1748 aa22.13■■□□□ 1.13
PDXDC1-204ENST00000455313 PLEKHG5O94827 1062 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms