RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 CABP2Q9NPB3 220 aa29.05■■■□□ 2.24
TNRC18-208ENST00000455076 BRD4O60885 1362 aaPredicted RBP29.04■■■□□ 2.24
TNRC18-208ENST00000455076 RBM6P78332 1123 aaKnown RBP29.04■■■□□ 2.24
TNRC18-208ENST00000455076 QTRT2Q9H974 415 aaKnown RBP29.04■■■□□ 2.24
TNRC18-208ENST00000455076 NWD2Q9ULI1 1742 aa29.03■■■□□ 2.24
TNRC18-208ENST00000455076 TRPC5Q9UL62 973 aaPredicted RBP29.03■■■□□ 2.24
TNRC18-208ENST00000455076 TIMELESSQ9UNS1 1208 aa29.03■■■□□ 2.24
TNRC18-208ENST00000455076 PLCH1Q4KWH8 1693 aa29.02■■■□□ 2.24
TNRC18-208ENST00000455076 LMOD2Q6P5Q4 547 aa29.01■■■□□ 2.23
TNRC18-208ENST00000455076 CABLES1Q8TDN4 633 aa29.01■■■□□ 2.23
TNRC18-208ENST00000455076 RGS12O14924 1447 aa29■■■□□ 2.23
TNRC18-208ENST00000455076 PHRF1Q9P1Y6 1649 aaKnown RBP28.99■■■□□ 2.23
TNRC18-208ENST00000455076 ATAD2Q6PL18 1390 aa28.98■■■□□ 2.23
TNRC18-208ENST00000455076 HAP1P54257 671 aaPredicted RBP28.97■■■□□ 2.23
TNRC18-208ENST00000455076 USP6P35125 1406 aa28.96■■■□□ 2.23
TNRC18-208ENST00000455076 COL14A1Q05707 1796 aaKnown RBP28.96■■■□□ 2.23
TNRC18-208ENST00000455076 PAK3O75914 559 aaPredicted RBP28.95■■■□□ 2.22
TNRC18-208ENST00000455076 UNC5CLQ8IV45 518 aa28.95■■■□□ 2.22
TNRC18-208ENST00000455076 SSH2Q76I76 1423 aa28.94■■■□□ 2.22
TNRC18-208ENST00000455076 AKAP12Q02952 1782 aa28.94■■■□□ 2.22
TNRC18-208ENST00000455076 CABP1Q9NZU7 370 aa28.94■■■□□ 2.22
TNRC18-208ENST00000455076 NRAPQ86VF7 1730 aa28.94■■■□□ 2.22
TNRC18-208ENST00000455076 GLI3P10071 1580 aa28.91■■■□□ 2.22
TNRC18-208ENST00000455076 NRKQ7Z2Y5 1582 aa28.91■■■□□ 2.22
TNRC18-208ENST00000455076 USP19O94966 1318 aa28.91■■■□□ 2.22
TNRC18-208ENST00000455076 CPSF1Q10570 1443 aaKnown RBP28.9■■■□□ 2.22
TNRC18-208ENST00000455076 FAM83GA6ND36 823 aa28.89■■■□□ 2.22
TNRC18-208ENST00000455076 PUS7Q96PZ0 661 aaKnown RBP28.89■■■□□ 2.22
TNRC18-208ENST00000455076 GJD4Q96KN9 370 aaPredicted RBP28.88■■■□□ 2.21
TNRC18-208ENST00000455076 TESK2Q96S53 571 aa28.87■■■□□ 2.21
TNRC18-208ENST00000455076 MON2Q7Z3U7 1717 aa28.86■■■□□ 2.21
TNRC18-208ENST00000455076 SLC24A1O60721 1099 aa28.85■■■□□ 2.21
TNRC18-208ENST00000455076 VPS72Q15906 364 aa28.85■■■□□ 2.21
TNRC18-208ENST00000455076 ABTB2Q8N961 1025 aa28.85■■■□□ 2.21
TNRC18-208ENST00000455076 ZNF692Q9BU19 519 aaPredicted RBP28.85■■■□□ 2.21
TNRC18-208ENST00000455076 PIK3C2AO00443 1686 aa28.85■■■□□ 2.21
TNRC18-208ENST00000455076 PLEKHG5O94827 1062 aa28.84■■■□□ 2.21
TNRC18-208ENST00000455076 SLIT3O75094 1523 aa28.84■■■□□ 2.21
TNRC18-208ENST00000455076 CPDO75976 1380 aa28.83■■■□□ 2.21
TNRC18-208ENST00000455076 CD163L1Q9NR16 1453 aa28.83■■■□□ 2.21
TNRC18-208ENST00000455076 ST20-MTHFSA0A0A6YYL1 179 aa28.82■■■□□ 2.2
TNRC18-208ENST00000455076 KIAA0232Q92628 1395 aa28.82■■■□□ 2.2
TNRC18-208ENST00000455076 USP47Q96K76 1375 aa28.82■■■□□ 2.2
TNRC18-208ENST00000455076 NLRP13Q86W25 1043 aa28.81■■■□□ 2.2
TNRC18-208ENST00000455076 NUTM2GQ5VZR2 741 aa28.79■■■□□ 2.2
TNRC18-208ENST00000455076 PRDM11Q9NQV5 511 aa28.79■■■□□ 2.2
TNRC18-208ENST00000455076 BTG4Q9NY30 223 aa28.79■■■□□ 2.2
TNRC18-208ENST00000455076 LMO7Q8WWI1 1683 aa28.79■■■□□ 2.2
TNRC18-208ENST00000455076 NINLQ9Y2I6 1382 aa28.78■■■□□ 2.2
TNRC18-208ENST00000455076 TTC21AQ8NDW8 1320 aa28.78■■■□□ 2.2
TNRC18-208ENST00000455076 USP54Q70EL1 1684 aa28.77■■■□□ 2.2
TNRC18-208ENST00000455076 EP400Q96L91 3159 aa28.77■■■□□ 2.2
TNRC18-208ENST00000455076 TTC21BQ7Z4L5 1316 aa28.77■■■□□ 2.2
TNRC18-208ENST00000455076 UPF1Q92900 1129 aaKnown RBP eCLIP28.76■■■□□ 2.19
TNRC18-208ENST00000455076 KTN1Q86UP2 1357 aaKnown RBP28.75■■■□□ 2.19
TNRC18-208ENST00000455076 ONECUT3O60422 494 aaPredicted RBP28.75■■■□□ 2.19
TNRC18-208ENST00000455076 CCER1Q8TC90 406 aaPredicted RBP28.75■■■□□ 2.19
TNRC18-208ENST00000455076 GCP02774 474 aa28.74■■■□□ 2.19
TNRC18-208ENST00000455076 NLRP6P59044 892 aa28.72■■■□□ 2.19
TNRC18-208ENST00000455076 ZC3H6P61129 1189 aaKnown RBP28.71■■■□□ 2.19
TNRC18-208ENST00000455076 CAMTA1Q9Y6Y1 1673 aa28.7■■■□□ 2.18
TNRC18-208ENST00000455076 SPATA31A5Q5VU36 1347 aa28.69■■■□□ 2.18
TNRC18-208ENST00000455076 SPATA31A7Q8IWB4 1347 aa28.69■■■□□ 2.18
TNRC18-208ENST00000455076 EDC4Q6P2E9 1401 aaKnown RBP28.69■■■□□ 2.18
TNRC18-208ENST00000455076 A0A1W2PP64 1363 aa28.69■■■□□ 2.18
TNRC18-208ENST00000455076 USP31Q70CQ4 1352 aa28.69■■■□□ 2.18
TNRC18-208ENST00000455076 BRWD3Q6RI45 1802 aa28.69■■■□□ 2.18
TNRC18-208ENST00000455076 CHRNA2Q15822 529 aa28.68■■■□□ 2.18
TNRC18-208ENST00000455076 SLC12A5Q9H2X9 1139 aa28.68■■■□□ 2.18
TNRC18-208ENST00000455076 HDGFL2Q7Z4V5 671 aaPredicted RBP28.67■■■□□ 2.18
TNRC18-208ENST00000455076 THSD7AQ9UPZ6 1657 aa28.67■■■□□ 2.18
TNRC18-208ENST00000455076 NFAT5O94916 1531 aa28.66■■■□□ 2.18
TNRC18-208ENST00000455076 TMF1P82094 1093 aa28.66■■■□□ 2.18
TNRC18-208ENST00000455076 TMC1Q8TDI8 760 aa28.66■■■□□ 2.18
TNRC18-208ENST00000455076 TERF2IPQ9NYB0 399 aa28.66■■■□□ 2.18
TNRC18-208ENST00000455076 COL18A1P39060 1754 aa28.65■■■□□ 2.18
TNRC18-208ENST00000455076 AATKQ6ZMQ8 1374 aa28.65■■■□□ 2.18
TNRC18-208ENST00000455076 CCDC9Q9Y3X0 531 aaKnown RBP28.65■■■□□ 2.18
TNRC18-208ENST00000455076 ABCC6O95255 1503 aa28.64■■■□□ 2.18
TNRC18-208ENST00000455076 SEPT12Q8IYM1 358 aa28.64■■■□□ 2.18
TNRC18-208ENST00000455076 KCNH5Q8NCM2 988 aa28.63■■■□□ 2.17
TNRC18-208ENST00000455076 COL5A2P05997 1499 aaPredicted RBP28.63■■■□□ 2.17
TNRC18-208ENST00000455076 SPATA31A1Q5TZJ5 1347 aa28.63■■■□□ 2.17
TNRC18-208ENST00000455076 ANKRD36BQ8N2N9 1353 aa28.61■■■□□ 2.17
TNRC18-208ENST00000455076 CDCA8Q53HL2 280 aa28.6■■■□□ 2.17
TNRC18-208ENST00000455076 OVOS2A0A0J9YW53 1432 aa28.6■■■□□ 2.17
TNRC18-208ENST00000455076 OVOS2Q6IE36 1432 aa28.6■■■□□ 2.17
TNRC18-208ENST00000455076 ARHGEF25Q86VW2 580 aa28.58■■■□□ 2.17
TNRC18-208ENST00000455076 FAM98CQ17RN3 349 aaKnown RBP28.57■■■□□ 2.16
TNRC18-208ENST00000455076 MYOM1P52179 1685 aa28.56■■■□□ 2.16
TNRC18-208ENST00000455076 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.56■■■□□ 2.16
TNRC18-208ENST00000455076 STRN4Q9NRL3 753 aa28.56■■■□□ 2.16
TNRC18-208ENST00000455076 NME9Q86XW9 330 aa28.55■■■□□ 2.16
TNRC18-208ENST00000455076 BARGINQ6ZT62 677 aa28.54■■■□□ 2.16
TNRC18-208ENST00000455076 KRT27Q7Z3Y8 459 aa28.53■■■□□ 2.16
TNRC18-208ENST00000455076 CCDC125Q86Z20 511 aa28.53■■■□□ 2.16
TNRC18-208ENST00000455076 CRB1P82279 1406 aa28.52■■■□□ 2.16
TNRC18-208ENST00000455076 EVA1CP58658 441 aa28.52■■■□□ 2.16
TNRC18-208ENST00000455076 LARP1Q6PKG0 1096 aaKnown RBP28.52■■■□□ 2.16
TNRC18-208ENST00000455076 ZRANB1Q9UGI0 708 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms