RNA–Protein interactions for RNA: ENST00000454960.1

BRPF3-207, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 3

Gene BRPF3, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-207ENST00000454960 PHF8Q9UPP1 1060 aa13.63□□□□□ -0.23
BRPF3-207ENST00000454960 DLC1Q96QB1 1528 aa13.63□□□□□ -0.23
BRPF3-207ENST00000454960 ARHGEF10O15013 1369 aa13.62□□□□□ -0.23
BRPF3-207ENST00000454960 APBA3O96018 575 aa13.62□□□□□ -0.23
BRPF3-207ENST00000454960 SBNO1A3KN83 1393 aa13.6□□□□□ -0.23
BRPF3-207ENST00000454960 SENP3-EIF4A1A0A087X0R7 540 aa13.6□□□□□ -0.23
BRPF3-207ENST00000454960 SPATA31A5Q5VU36 1347 aa13.6□□□□□ -0.23
BRPF3-207ENST00000454960 SPATA31A7Q8IWB4 1347 aa13.6□□□□□ -0.23
BRPF3-207ENST00000454960 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
BRPF3-207ENST00000454960 NBPF8Q3BBV2 869 aa13.59□□□□□ -0.23
BRPF3-207ENST00000454960 NBPF14Q5TI25 921 aa13.59□□□□□ -0.23
BRPF3-207ENST00000454960 FAM196AQ6ZSG2 479 aa13.58□□□□□ -0.24
BRPF3-207ENST00000454960 PMFBP1Q8TBY8 1022 aa13.58□□□□□ -0.24
BRPF3-207ENST00000454960 DCAF11Q8TEB1 546 aa13.58□□□□□ -0.24
BRPF3-207ENST00000454960 SPON1Q9HCB6 807 aa13.58□□□□□ -0.24
BRPF3-207ENST00000454960 TRPM3Q9HCF6 1732 aaPredicted RBP13.58□□□□□ -0.24
BRPF3-207ENST00000454960 PARD3Q8TEW0 1356 aa13.58□□□□□ -0.24
BRPF3-207ENST00000454960 NINLQ9Y2I6 1382 aa13.58□□□□□ -0.24
BRPF3-207ENST00000454960 ALS2Q96Q42 1657 aa13.56□□□□□ -0.24
BRPF3-207ENST00000454960 KCNQ2O43526 872 aa13.56□□□□□ -0.24
BRPF3-207ENST00000454960 IFFO2Q5TF58 517 aa13.56□□□□□ -0.24
BRPF3-207ENST00000454960 ZNF784Q8NCA9 323 aaPredicted RBP13.56□□□□□ -0.24
BRPF3-207ENST00000454960 PRAM1Q96QH2 718 aa13.56□□□□□ -0.24
BRPF3-207ENST00000454960 KDM2AQ9Y2K7 1162 aa13.56□□□□□ -0.24
BRPF3-207ENST00000454960 CHD4Q14839 1912 aa13.56□□□□□ -0.24
BRPF3-207ENST00000454960 UTRNP46939 3433 aa13.55□□□□□ -0.24
BRPF3-207ENST00000454960 SAFB2Q14151 953 aaKnown RBP eCLIP13.55□□□□□ -0.24
BRPF3-207ENST00000454960 SIRT1Q96EB6 747 aa13.55□□□□□ -0.24
BRPF3-207ENST00000454960 KIAA1210Q9ULL0 1709 aa13.55□□□□□ -0.24
BRPF3-207ENST00000454960 CRYBG1Q9Y4K1 1723 aa13.55□□□□□ -0.24
BRPF3-207ENST00000454960 PRDM11Q9NQV5 511 aa13.53□□□□□ -0.24
BRPF3-207ENST00000454960 STRN4Q9NRL3 753 aa13.53□□□□□ -0.24
BRPF3-207ENST00000454960 USP35Q9P2H5 1018 aa13.53□□□□□ -0.24
BRPF3-207ENST00000454960 NRKQ7Z2Y5 1582 aa13.53□□□□□ -0.24
BRPF3-207ENST00000454960 TRAK1Q9UPV9 953 aa13.52□□□□□ -0.25
BRPF3-207ENST00000454960 SPATA31A1Q5TZJ5 1347 aa13.52□□□□□ -0.25
BRPF3-207ENST00000454960 TULP4Q9NRJ4 1543 aa13.51□□□□□ -0.25
BRPF3-207ENST00000454960 PDE3BQ13370 1112 aa13.51□□□□□ -0.25
BRPF3-207ENST00000454960 MYOM1P52179 1685 aa13.5□□□□□ -0.25
BRPF3-207ENST00000454960 ANKARQ7Z5J8 1434 aa13.5□□□□□ -0.25
BRPF3-207ENST00000454960 CHRNA2Q15822 529 aa13.5□□□□□ -0.25
BRPF3-207ENST00000454960 GPRASP1Q5JY77 1395 aa13.49□□□□□ -0.25
BRPF3-207ENST00000454960 PRR36Q9H6K5 1346 aa13.49□□□□□ -0.25
BRPF3-207ENST00000454960 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
BRPF3-207ENST00000454960 C1QTNF8P60827 252 aa13.49□□□□□ -0.25
BRPF3-207ENST00000454960 HIRIP3Q9BW71 556 aaPredicted RBP13.49□□□□□ -0.25
BRPF3-207ENST00000454960 CASZ1Q86V15 1759 aa13.49□□□□□ -0.25
BRPF3-207ENST00000454960 ATP7BP35670 1465 aa13.48□□□□□ -0.25
BRPF3-207ENST00000454960 MINK1Q8N4C8 1332 aaPredicted RBP13.48□□□□□ -0.25
BRPF3-207ENST00000454960 STAC3Q96MF2 364 aa13.48□□□□□ -0.25
BRPF3-207ENST00000454960 POGKQ9P215 609 aa13.48□□□□□ -0.25
BRPF3-207ENST00000454960 PHRF1Q9P1Y6 1649 aaKnown RBP13.48□□□□□ -0.25
BRPF3-207ENST00000454960 KIAA0232Q92628 1395 aa13.47□□□□□ -0.25
BRPF3-207ENST00000454960 TOPAZ1Q8N9V7 1692 aa13.47□□□□□ -0.25
BRPF3-207ENST00000454960 TRPM1Q7Z4N2 1603 aa13.46□□□□□ -0.25
BRPF3-207ENST00000454960 SIN3AQ96ST3 1273 aa13.46□□□□□ -0.25
BRPF3-207ENST00000454960 SBF2Q86WG5 1849 aa13.46□□□□□ -0.26
BRPF3-207ENST00000454960 ITSN1Q15811 1721 aa13.45□□□□□ -0.26
BRPF3-207ENST00000454960 ZBTB7AO95365 584 aa13.45□□□□□ -0.26
BRPF3-207ENST00000454960 EVA1CP58658 441 aa13.45□□□□□ -0.26
BRPF3-207ENST00000454960 ZC3H6P61129 1189 aaKnown RBP13.45□□□□□ -0.26
BRPF3-207ENST00000454960 NBPF1Q3BBV0 1214 aa13.45□□□□□ -0.26
BRPF3-207ENST00000454960 RGPD3A6NKT7 1758 aaPredicted RBP13.45□□□□□ -0.26
BRPF3-207ENST00000454960 RGPD4Q7Z3J3 1758 aa13.45□□□□□ -0.26
BRPF3-207ENST00000454960 QRICH2Q9H0J4 1663 aa13.44□□□□□ -0.26
BRPF3-207ENST00000454960 PDGFDQ9GZP0 370 aaPredicted RBP13.44□□□□□ -0.26
BRPF3-207ENST00000454960 BARGINQ6ZT62 677 aa13.43□□□□□ -0.26
BRPF3-207ENST00000454960 SSH2Q76I76 1423 aa13.43□□□□□ -0.26
BRPF3-207ENST00000454960 NGDNQ8NEJ9 315 aaKnown RBP13.43□□□□□ -0.26
BRPF3-207ENST00000454960 L3MBTL2Q969R5 705 aa13.43□□□□□ -0.26
BRPF3-207ENST00000454960 ANO8Q9HCE9 1232 aaPredicted RBP13.43□□□□□ -0.26
BRPF3-207ENST00000454960 PARP4Q9UKK3 1724 aaKnown RBP13.43□□□□□ -0.26
BRPF3-207ENST00000454960 EIF3AQ14152 1382 aaKnown RBP13.43□□□□□ -0.26
BRPF3-207ENST00000454960 WASLO00401 505 aaPredicted RBP13.42□□□□□ -0.26
BRPF3-207ENST00000454960 ATF5Q9Y2D1 282 aaPredicted RBP13.42□□□□□ -0.26
BRPF3-207ENST00000454960 NUTM2GQ5VZR2 741 aa13.41□□□□□ -0.26
BRPF3-207ENST00000454960 LARP1Q6PKG0 1096 aaKnown RBP13.41□□□□□ -0.26
BRPF3-207ENST00000454960 FHDC1Q9C0D6 1143 aaPredicted RBP13.41□□□□□ -0.26
BRPF3-207ENST00000454960 TCP11L2Q8N4U5 519 aa13.4□□□□□ -0.26
BRPF3-207ENST00000454960 SYT17Q9BSW7 474 aa13.4□□□□□ -0.26
BRPF3-207ENST00000454960 BCL11BQ9C0K0 894 aaPredicted RBP13.4□□□□□ -0.26
BRPF3-207ENST00000454960 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
BRPF3-207ENST00000454960 PTGER2P43116 358 aa13.39□□□□□ -0.27
BRPF3-207ENST00000454960 CEP350Q5VT06 3117 aa13.39□□□□□ -0.27
BRPF3-207ENST00000454960 GIGYF1O75420 1035 aaPredicted RBP13.38□□□□□ -0.27
BRPF3-207ENST00000454960 NEUROD1Q13562 356 aa13.38□□□□□ -0.27
BRPF3-207ENST00000454960 OVOS2A0A0G2JMS6 1433 aa13.38□□□□□ -0.27
BRPF3-207ENST00000454960 OVOS2A0A0J9YW53 1432 aa13.38□□□□□ -0.27
BRPF3-207ENST00000454960 OVOS2Q6IE36 1432 aa13.38□□□□□ -0.27
BRPF3-207ENST00000454960 AKAP12Q02952 1782 aa13.37□□□□□ -0.27
BRPF3-207ENST00000454960 LMO7Q8WWI1 1683 aa13.37□□□□□ -0.27
BRPF3-207ENST00000454960 CENPJQ9HC77 1338 aaPredicted RBP13.37□□□□□ -0.27
BRPF3-207ENST00000454960 LRRC37A3O60309 1634 aa13.36□□□□□ -0.27
BRPF3-207ENST00000454960 PLSCR1O15162 318 aa13.36□□□□□ -0.27
BRPF3-207ENST00000454960 PTF1AQ7RTS3 328 aa13.36□□□□□ -0.27
BRPF3-207ENST00000454960 CDK19Q9BWU1 502 aa13.36□□□□□ -0.27
BRPF3-207ENST00000454960 POLR3AO14802 1390 aaPredicted RBP13.35□□□□□ -0.27
BRPF3-207ENST00000454960 NUDT16Q96DE0 195 aaKnown RBP13.35□□□□□ -0.27
BRPF3-207ENST00000454960 ROCK2O75116 1388 aaKnown RBP13.34□□□□□ -0.27
BRPF3-207ENST00000454960 C11orf95C9JLR9 678 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 242 ms