RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 C22orf23Q9BZE7 217 aa12.32□□□□□ -0.44
CSGALNACT1-203ENST00000454498 ZKSCAN1P17029 563 aaPredicted RBP12.31□□□□□ -0.44
CSGALNACT1-203ENST00000454498 TATP17735 454 aaPredicted RBP12.31□□□□□ -0.44
CSGALNACT1-203ENST00000454498 CFAP43Q8NDM7 1665 aa12.31□□□□□ -0.44
CSGALNACT1-203ENST00000454498 SURF6O75683 361 aaKnown RBP12.31□□□□□ -0.44
CSGALNACT1-203ENST00000454498 NAP1L5Q96NT1 182 aaPredicted RBP12.31□□□□□ -0.44
CSGALNACT1-203ENST00000454498 STRN4Q9NRL3 753 aa12.3□□□□□ -0.44
CSGALNACT1-203ENST00000454498 KIF3AQ9Y496 699 aa12.3□□□□□ -0.44
CSGALNACT1-203ENST00000454498 MVPQ14764 893 aaKnown RBP12.3□□□□□ -0.44
CSGALNACT1-203ENST00000454498 EMILIN1Q9Y6C2 1016 aa12.3□□□□□ -0.44
CSGALNACT1-203ENST00000454498 GOLGA6L3A6NEY3 463 aa12.3□□□□□ -0.44
CSGALNACT1-203ENST00000454498 LRRFIP1Q32MZ4 808 aaKnown RBP12.3□□□□□ -0.44
CSGALNACT1-203ENST00000454498 ZNF428Q96B54 188 aa12.3□□□□□ -0.44
CSGALNACT1-203ENST00000454498 MSNP26038 577 aaKnown RBP12.29□□□□□ -0.44
CSGALNACT1-203ENST00000454498 ZC3H6P61129 1189 aaKnown RBP12.29□□□□□ -0.44
CSGALNACT1-203ENST00000454498 PRDM11Q9NQV5 511 aa12.29□□□□□ -0.44
CSGALNACT1-203ENST00000454498 ZNF518AQ6AHZ1 1483 aa12.29□□□□□ -0.44
CSGALNACT1-203ENST00000454498 ERC2O15083 957 aa12.29□□□□□ -0.44
CSGALNACT1-203ENST00000454498 GLIPR1L2Q4G1C9 344 aa12.29□□□□□ -0.44
CSGALNACT1-203ENST00000454498 DRC7Q8IY82 874 aa12.29□□□□□ -0.44
CSGALNACT1-203ENST00000454498 CLASRPQ8N2M8 674 aaKnown RBP12.29□□□□□ -0.44
CSGALNACT1-203ENST00000454498 RBM33Q96EV2 1170 aaKnown RBP12.29□□□□□ -0.44
CSGALNACT1-203ENST00000454498 ABCA5Q8WWZ7 1642 aa12.28□□□□□ -0.44
CSGALNACT1-203ENST00000454498 RALGAPBQ86X10 1494 aa12.28□□□□□ -0.44
CSGALNACT1-203ENST00000454498 DDX11L8A8MPP1 907 aa12.28□□□□□ -0.44
CSGALNACT1-203ENST00000454498 FOXD4L6Q3SYB3 417 aaPredicted RBP12.28□□□□□ -0.44
CSGALNACT1-203ENST00000454498 FOXD4L3Q6VB84 417 aaPredicted RBP12.28□□□□□ -0.44
CSGALNACT1-203ENST00000454498 PRAG1Q86YV5 1406 aa12.28□□□□□ -0.44
CSGALNACT1-203ENST00000454498 CDC45O75419 566 aa12.28□□□□□ -0.44
CSGALNACT1-203ENST00000454498 G3V3G9 751 aa12.28□□□□□ -0.44
CSGALNACT1-203ENST00000454498 FOXO3O43524 673 aa12.28□□□□□ -0.44
CSGALNACT1-203ENST00000454498 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
CSGALNACT1-203ENST00000454498 NINLQ9Y2I6 1382 aa12.28□□□□□ -0.44
CSGALNACT1-203ENST00000454498 GNAI2P04899 355 aa12.27□□□□□ -0.44
CSGALNACT1-203ENST00000454498 CSPP1Q1MSJ5 1256 aa12.27□□□□□ -0.44
CSGALNACT1-203ENST00000454498 TOM1L2Q6ZVM7 507 aa12.27□□□□□ -0.44
CSGALNACT1-203ENST00000454498 GCC1Q96CN9 775 aa12.27□□□□□ -0.44
CSGALNACT1-203ENST00000454498 DDX49Q9Y6V7 483 aaKnown RBP12.27□□□□□ -0.44
CSGALNACT1-203ENST00000454498 DCTN1Q14203 1278 aa12.27□□□□□ -0.45
CSGALNACT1-203ENST00000454498 NEUROD6Q96NK8 337 aa12.26□□□□□ -0.45
CSGALNACT1-203ENST00000454498 CHMP5Q9NZZ3 219 aa12.26□□□□□ -0.45
CSGALNACT1-203ENST00000454498 PHF8Q9UPP1 1060 aa12.26□□□□□ -0.45
CSGALNACT1-203ENST00000454498 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
CSGALNACT1-203ENST00000454498 KCNH5Q8NCM2 988 aa12.26□□□□□ -0.45
CSGALNACT1-203ENST00000454498 CCT4P50991 539 aaKnown RBP12.26□□□□□ -0.45
CSGALNACT1-203ENST00000454498 TESK2Q96S53 571 aa12.26□□□□□ -0.45
CSGALNACT1-203ENST00000454498 ABCC10Q5T3U5 1492 aa12.26□□□□□ -0.45
CSGALNACT1-203ENST00000454498 MCM10Q7L590 875 aa12.26□□□□□ -0.45
CSGALNACT1-203ENST00000454498 FAM184AQ8NB25 1140 aa12.26□□□□□ -0.45
CSGALNACT1-203ENST00000454498 RARSP54136 660 aaKnown RBP12.25□□□□□ -0.45
CSGALNACT1-203ENST00000454498 RNF20Q5VTR2 975 aa12.25□□□□□ -0.45
CSGALNACT1-203ENST00000454498 SSH1Q8WYL5 1049 aa12.25□□□□□ -0.45
CSGALNACT1-203ENST00000454498 SHANK2Q9UPX8 1470 aa12.25□□□□□ -0.45
CSGALNACT1-203ENST00000454498 ABCC2Q92887 1545 aa12.25□□□□□ -0.45
CSGALNACT1-203ENST00000454498 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
CSGALNACT1-203ENST00000454498 SRCIN1Q9C0H9 1055 aa12.25□□□□□ -0.45
CSGALNACT1-203ENST00000454498 ATP6V1DQ9Y5K8 247 aa12.25□□□□□ -0.45
CSGALNACT1-203ENST00000454498 C20orf194Q5TEA3 1177 aa12.25□□□□□ -0.45
CSGALNACT1-203ENST00000454498 BACH2Q9BYV9 841 aa12.24□□□□□ -0.45
CSGALNACT1-203ENST00000454498 MIS18AQ9NYP9 233 aa12.24□□□□□ -0.45
CSGALNACT1-203ENST00000454498 TNRQ92752 1358 aa12.24□□□□□ -0.45
CSGALNACT1-203ENST00000454498 H3BQV1 296 aa12.24□□□□□ -0.45
CSGALNACT1-203ENST00000454498 SF3A1Q15459 793 aaKnown RBP12.24□□□□□ -0.45
CSGALNACT1-203ENST00000454498 IFFO2Q5TF58 517 aa12.24□□□□□ -0.45
CSGALNACT1-203ENST00000454498 DUSP27Q5VZP5 1158 aa12.24□□□□□ -0.45
CSGALNACT1-203ENST00000454498 SPG7Q9UQ90 795 aa12.24□□□□□ -0.45
CSGALNACT1-203ENST00000454498 ABCC11Q96J66 1382 aa12.24□□□□□ -0.45
CSGALNACT1-203ENST00000454498 MSH5O43196 834 aa12.24□□□□□ -0.45
CSGALNACT1-203ENST00000454498 APPP05067 770 aa12.24□□□□□ -0.45
CSGALNACT1-203ENST00000454498 TMEM57Q8N5G2 664 aa12.24□□□□□ -0.45
CSGALNACT1-203ENST00000454498 GNAT3A8MTJ3 354 aa12.23□□□□□ -0.45
CSGALNACT1-203ENST00000454498 RBM42Q9BTD8 480 aaKnown RBP12.23□□□□□ -0.45
CSGALNACT1-203ENST00000454498 NSD2O96028 1365 aa12.23□□□□□ -0.45
CSGALNACT1-203ENST00000454498 CABP4P57796 275 aa12.23□□□□□ -0.45
CSGALNACT1-203ENST00000454498 CHMP4CQ96CF2 233 aa12.23□□□□□ -0.45
CSGALNACT1-203ENST00000454498 CPLX2Q6PUV4 134 aaKnown RBP12.22□□□□□ -0.45
CSGALNACT1-203ENST00000454498 PZPP20742 1482 aa12.22□□□□□ -0.45
CSGALNACT1-203ENST00000454498 FBLN1P23142 703 aa12.22□□□□□ -0.45
CSGALNACT1-203ENST00000454498 MEX3CQ5U5Q3 659 aaKnown RBP12.22□□□□□ -0.45
CSGALNACT1-203ENST00000454498 CCDC34Q96HJ3 373 aa12.22□□□□□ -0.45
CSGALNACT1-203ENST00000454498 PBRM1Q86U86 1689 aa12.22□□□□□ -0.45
CSGALNACT1-203ENST00000454498 FYB1O15117 783 aa12.22□□□□□ -0.45
CSGALNACT1-203ENST00000454498 CHAF1AQ13111 956 aaPredicted RBP12.22□□□□□ -0.45
CSGALNACT1-203ENST00000454498 VPS37DQ86XT2 251 aa12.22□□□□□ -0.45
CSGALNACT1-203ENST00000454498 KIAA2012Q0VF49 1180 aa12.21□□□□□ -0.45
CSGALNACT1-203ENST00000454498 ACEP12821 1306 aa12.21□□□□□ -0.45
CSGALNACT1-203ENST00000454498 UHRF1BP1LA0JNW5 1464 aa12.21□□□□□ -0.45
CSGALNACT1-203ENST00000454498 TEX14Q8IWB6 1497 aa12.21□□□□□ -0.45
CSGALNACT1-203ENST00000454498 BTBD11A6QL63 1104 aa12.21□□□□□ -0.45
CSGALNACT1-203ENST00000454498 SAMD9Q5K651 1589 aa12.21□□□□□ -0.45
CSGALNACT1-203ENST00000454498 IFT57Q9NWB7 429 aa12.21□□□□□ -0.45
CSGALNACT1-203ENST00000454498 PHF14O94880 888 aa12.21□□□□□ -0.46
CSGALNACT1-203ENST00000454498 CNTROBQ8N137 903 aa12.21□□□□□ -0.46
CSGALNACT1-203ENST00000454498 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.46
CSGALNACT1-203ENST00000454498 GSE1Q14687 1217 aa12.2□□□□□ -0.46
CSGALNACT1-203ENST00000454498 NKTRP30414 1462 aaKnown RBP12.2□□□□□ -0.46
CSGALNACT1-203ENST00000454498 TRDNQ13061 729 aa12.2□□□□□ -0.46
CSGALNACT1-203ENST00000454498 SKOR2Q2VWA4 1001 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT1-203ENST00000454498 USHBP1Q8N6Y0 703 aa12.2□□□□□ -0.46
CSGALNACT1-203ENST00000454498 FSD1Q9BTV5 496 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms