RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 PPP1R9BQ96SB3 815 aa4.31□□□□□ -1.72
AC006539.3-201ENST00000454258 GTPBP4Q9BZE4 634 aaKnown RBP4.31□□□□□ -1.72
AC006539.3-201ENST00000454258 SLKQ9H2G2 1235 aaPredicted RBP4.31□□□□□ -1.72
AC006539.3-201ENST00000454258 ANTXR1Q9H6X2 564 aa4.31□□□□□ -1.72
AC006539.3-201ENST00000454258 PCDHB8Q9UN66 801 aa4.31□□□□□ -1.72
AC006539.3-201ENST00000454258 KNSTRNQ9Y448 316 aa4.31□□□□□ -1.72
AC006539.3-201ENST00000454258 PCDHB13Q9Y5F0 798 aa4.31□□□□□ -1.72
AC006539.3-201ENST00000454258 MYO5CQ9NQX4 1742 aa4.31□□□□□ -1.72
AC006539.3-201ENST00000454258 TARBP1Q13395 1621 aaKnown RBP4.31□□□□□ -1.72
AC006539.3-201ENST00000454258 GPATCH8Q9UKJ3 1502 aaKnown RBP4.31□□□□□ -1.72
AC006539.3-201ENST00000454258 NUP155O75694 1391 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 ABCC11Q96J66 1382 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 SBNO2Q9Y2G9 1366 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 SPHKAPQ2M3C7 1700 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 ZNF500O60304 480 aaPredicted RBP4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 LETM1O95202 739 aaPredicted RBP4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 TPM3P06753 285 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 XRCC6P12956 609 aaKnown RBP eCLIP4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 NASPP49321 788 aaPredicted RBP4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 NUCB2P80303 420 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 CHAF1AQ13111 956 aaPredicted RBP4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 CNGB1Q14028 1251 aaPredicted RBP4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 E2F4Q16254 413 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 DUSP27Q5VZP5 1158 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 CLEC17AQ6ZS10 378 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 FAM184AQ8NB25 1140 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 RGS22Q8NE09 1264 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 PRIMPOLQ96LW4 560 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 TSPYL1Q9H0U9 437 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 RRAGDQ9NQL2 400 aaPredicted RBP4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 POGKQ9P215 609 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 CFDP1Q9UEE9 299 aaPredicted RBP4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 CCDC39Q9UFE4 941 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 PREX2Q70Z35 1606 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 CFAP74Q9C0B2 1584 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 RAD54L2Q9Y4B4 1467 aa4.3□□□□□ -1.72
AC006539.3-201ENST00000454258 NSD2O96028 1365 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 TDRD9Q8NDG6 1382 aaKnown RBP4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 PLEKHH1Q9ULM0 1364 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 ST20-MTHFSA0A0A6YYL1 179 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 MBD3O95983 291 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 TSPY4P0CV99 314 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 TSPY10P0CW01 314 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 SLFN5Q08AF3 891 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 KLHL40Q2TBA0 621 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 SASS6Q6UVJ0 657 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 KIAA1211Q6ZU35 1233 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 SMC5Q8IY18 1101 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 PDCL2Q8N4E4 241 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 ZNF579Q8NAF0 562 aaKnown RBP4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 DCAF11Q8TEB1 546 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 ZNF428Q96B54 188 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 POLR3GLQ9BT43 218 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 CHIC2Q9UKJ5 165 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 MYOM2P54296 1465 aa4.29□□□□□ -1.72
AC006539.3-201ENST00000454258 POLR3AO14802 1390 aaPredicted RBP4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 MYO3AQ8NEV4 1616 aa4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 MADDQ8WXG6 1647 aa4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 TRPM2O94759 1503 aa4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 PPP1R37O75864 691 aa4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 HSP90AB1P08238 724 aaKnown RBP4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 RGS3P49796 1198 aa4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 CCDC27Q2M243 656 aa4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 CYB5RLQ6IPT4 315 aa4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 CHADLQ6NUI6 762 aa4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 TRMT2AQ8IZ69 625 aaKnown RBP4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 CCDC94Q9BW85 323 aaPredicted RBP4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 TBC1D2Q9BYX2 928 aa4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 C22orf23Q9BZE7 217 aa4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 KDM4CQ9H3R0 1056 aa4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 CWC22Q9HCG8 908 aaKnown RBP4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 NOL7Q9UMY1 257 aaKnown RBP4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 CEP152O94986 1710 aa4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 ASXL2Q76L83 1435 aa4.28□□□□□ -1.72
AC006539.3-201ENST00000454258 MYOM1P52179 1685 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 A2MP01023 1474 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 WDR7Q9Y4E6 1490 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 CCDC66A2RUB6 948 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 PER1O15534 1290 aaPredicted RBP4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 ONECUT3O60422 494 aaPredicted RBP4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 CDK11BP21127 795 aaKnown RBP4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 NLRP6P59044 892 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 ZNF445P59923 1031 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 KIAA2012Q0VF49 1180 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 HDAC1Q13547 482 aaPredicted RBP4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 RAB3GAP1Q15042 981 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 CASC1Q6TDU7 716 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 WDR63Q8IWG1 891 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 FBXO22Q8NEZ5 403 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 CFAP53Q96M91 514 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 DIAPH3Q9NSV4 1193 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 DDX19BQ9UMR2 479 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 KIF3AQ9Y496 699 aa4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 FARP1Q9Y4F1 1045 aaPredicted RBP4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 INO80Q9ULG1 1556 aaPredicted RBP4.27□□□□□ -1.73
AC006539.3-201ENST00000454258 CDC42BPBQ9Y5S2 1711 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 DISP1Q96F81 1524 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 IQSEC2Q5JU85 1478 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 RIMBP3CA6NJZ7 1639 aa4.26□□□□□ -1.73
AC006539.3-201ENST00000454258 RIMBP3BA6NNM3 1639 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms