RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 KDM2AQ9Y2K7 1162 aa10.43□□□□□ -0.74
CHEK2-220ENST00000454252 RGPD8O14715 1765 aaPredicted RBP10.42□□□□□ -0.74
CHEK2-220ENST00000454252 NRAPQ86VF7 1730 aa10.42□□□□□ -0.74
CHEK2-220ENST00000454252 PRDM11Q9NQV5 511 aa10.42□□□□□ -0.74
CHEK2-220ENST00000454252 KIAA0232Q92628 1395 aa10.41□□□□□ -0.74
CHEK2-220ENST00000454252 LRP5O75197 1615 aa10.41□□□□□ -0.74
CHEK2-220ENST00000454252 WASLO00401 505 aaPredicted RBP10.41□□□□□ -0.74
CHEK2-220ENST00000454252 TRIM37O94972 964 aa10.41□□□□□ -0.74
CHEK2-220ENST00000454252 NGDNQ8NEJ9 315 aaKnown RBP10.41□□□□□ -0.74
CHEK2-220ENST00000454252 STRN4Q9NRL3 753 aa10.41□□□□□ -0.74
CHEK2-220ENST00000454252 USP35Q9P2H5 1018 aa10.41□□□□□ -0.74
CHEK2-220ENST00000454252 DLC1Q96QB1 1528 aa10.41□□□□□ -0.74
CHEK2-220ENST00000454252 TRPM3Q9HCF6 1732 aaPredicted RBP10.41□□□□□ -0.74
CHEK2-220ENST00000454252 GPRASP1Q5JY77 1395 aa10.4□□□□□ -0.74
CHEK2-220ENST00000454252 ZC3H6P61129 1189 aaKnown RBP10.4□□□□□ -0.74
CHEK2-220ENST00000454252 NWD2Q9ULI1 1742 aa10.4□□□□□ -0.74
CHEK2-220ENST00000454252 ADGRB2O60241 1585 aa10.39□□□□□ -0.75
CHEK2-220ENST00000454252 SPATA31A1Q5TZJ5 1347 aa10.39□□□□□ -0.75
CHEK2-220ENST00000454252 TULP4Q9NRJ4 1543 aa10.39□□□□□ -0.75
CHEK2-220ENST00000454252 MSH5O43196 834 aa10.39□□□□□ -0.75
CHEK2-220ENST00000454252 DCAF11Q8TEB1 546 aa10.39□□□□□ -0.75
CHEK2-220ENST00000454252 CAMKK2Q96RR4 588 aa10.39□□□□□ -0.75
CHEK2-220ENST00000454252 RAB3GAP2Q9H2M9 1393 aa10.39□□□□□ -0.75
CHEK2-220ENST00000454252 ALS2Q96Q42 1657 aa10.38□□□□□ -0.75
CHEK2-220ENST00000454252 THSD7AQ9UPZ6 1657 aa10.38□□□□□ -0.75
CHEK2-220ENST00000454252 ATP7BP35670 1465 aa10.37□□□□□ -0.75
CHEK2-220ENST00000454252 DISP2A7MBM2 1401 aa10.37□□□□□ -0.75
CHEK2-220ENST00000454252 NUDT16Q96DE0 195 aaKnown RBP10.37□□□□□ -0.75
CHEK2-220ENST00000454252 COL14A1Q05707 1796 aaKnown RBP10.37□□□□□ -0.75
CHEK2-220ENST00000454252 APBA3O96018 575 aa10.36□□□□□ -0.75
CHEK2-220ENST00000454252 LARP1Q6PKG0 1096 aaKnown RBP10.36□□□□□ -0.75
CHEK2-220ENST00000454252 CDK19Q9BWU1 502 aa10.35□□□□□ -0.75
CHEK2-220ENST00000454252 ACEP12821 1306 aa10.34□□□□□ -0.75
CHEK2-220ENST00000454252 CRYBG1Q9Y4K1 1723 aa10.34□□□□□ -0.75
CHEK2-220ENST00000454252 FAM196AQ6ZSG2 479 aa10.34□□□□□ -0.75
CHEK2-220ENST00000454252 EIF3AQ14152 1382 aaKnown RBP10.34□□□□□ -0.75
CHEK2-220ENST00000454252 SSH2Q76I76 1423 aa10.33□□□□□ -0.76
CHEK2-220ENST00000454252 TNS1Q9HBL0 1735 aaKnown RBP10.33□□□□□ -0.76
CHEK2-220ENST00000454252 UTRNP46939 3433 aa10.33□□□□□ -0.76
CHEK2-220ENST00000454252 ZBTB7CA1YPR0 619 aa10.32□□□□□ -0.76
CHEK2-220ENST00000454252 EVA1CP58658 441 aa10.32□□□□□ -0.76
CHEK2-220ENST00000454252 NBPF8Q3BBV2 869 aa10.32□□□□□ -0.76
CHEK2-220ENST00000454252 PTF1AQ7RTS3 328 aa10.32□□□□□ -0.76
CHEK2-220ENST00000454252 CAMTA1Q9Y6Y1 1673 aa10.31□□□□□ -0.76
CHEK2-220ENST00000454252 POLR3AO14802 1390 aaPredicted RBP10.31□□□□□ -0.76
CHEK2-220ENST00000454252 RGPD1P0DJD0 1748 aa10.31□□□□□ -0.76
CHEK2-220ENST00000454252 PDE3BQ13370 1112 aa10.31□□□□□ -0.76
CHEK2-220ENST00000454252 TCP11L2Q8N4U5 519 aa10.31□□□□□ -0.76
CHEK2-220ENST00000454252 ABTB2Q8N961 1025 aa10.31□□□□□ -0.76
CHEK2-220ENST00000454252 NBPF1Q3BBV0 1214 aa10.3□□□□□ -0.76
CHEK2-220ENST00000454252 BARGINQ6ZT62 677 aa10.3□□□□□ -0.76
CHEK2-220ENST00000454252 PDGFDQ9GZP0 370 aaPredicted RBP10.3□□□□□ -0.76
CHEK2-220ENST00000454252 NRKQ7Z2Y5 1582 aa10.3□□□□□ -0.76
CHEK2-220ENST00000454252 USP19O94966 1318 aa10.3□□□□□ -0.76
CHEK2-220ENST00000454252 PHRF1Q9P1Y6 1649 aaKnown RBP10.29□□□□□ -0.76
CHEK2-220ENST00000454252 YY1P25490 414 aa10.29□□□□□ -0.76
CHEK2-220ENST00000454252 ANO8Q9HCE9 1232 aaPredicted RBP10.29□□□□□ -0.76
CHEK2-220ENST00000454252 CABP2Q9NPB3 220 aa10.29□□□□□ -0.76
CHEK2-220ENST00000454252 CCDC61Q9Y6R9 512 aa10.29□□□□□ -0.76
CHEK2-220ENST00000454252 PLEKHG3A1L390 1219 aa10.28□□□□□ -0.76
CHEK2-220ENST00000454252 GCP02774 474 aa10.28□□□□□ -0.76
CHEK2-220ENST00000454252 COL5A2P05997 1499 aaPredicted RBP10.28□□□□□ -0.76
CHEK2-220ENST00000454252 CPDO75976 1380 aa10.27□□□□□ -0.76
CHEK2-220ENST00000454252 PARD3Q8TEW0 1356 aa10.27□□□□□ -0.76
CHEK2-220ENST00000454252 ARHGEF28Q8N1W1 1705 aaKnown RBP10.27□□□□□ -0.76
CHEK2-220ENST00000454252 SRPK2P78362 688 aaKnown RBP10.27□□□□□ -0.77
CHEK2-220ENST00000454252 PPIP5K1Q6PFW1 1433 aa10.26□□□□□ -0.77
CHEK2-220ENST00000454252 LMO7Q8WWI1 1683 aa10.26□□□□□ -0.77
CHEK2-220ENST00000454252 NBPF14Q5TI25 921 aa10.26□□□□□ -0.77
CHEK2-220ENST00000454252 PPP1R1BQ9UD71 204 aaPredicted RBP10.26□□□□□ -0.77
CHEK2-220ENST00000454252 NUP188Q5SRE5 1749 aa10.25□□□□□ -0.77
CHEK2-220ENST00000454252 AXIN2Q9Y2T1 843 aa10.25□□□□□ -0.77
CHEK2-220ENST00000454252 TOPAZ1Q8N9V7 1692 aa10.25□□□□□ -0.77
CHEK2-220ENST00000454252 RREB1Q92766 1687 aa10.25□□□□□ -0.77
CHEK2-220ENST00000454252 SOX12O15370 315 aa10.24□□□□□ -0.77
CHEK2-220ENST00000454252 KCNQ2O43526 872 aa10.24□□□□□ -0.77
CHEK2-220ENST00000454252 ZBTB7AO95365 584 aa10.24□□□□□ -0.77
CHEK2-220ENST00000454252 PROM2Q8N271 834 aa10.24□□□□□ -0.77
CHEK2-220ENST00000454252 SPON1Q9HCB6 807 aa10.24□□□□□ -0.77
CHEK2-220ENST00000454252 CABP1Q9NZU7 370 aa10.24□□□□□ -0.77
CHEK2-220ENST00000454252 NLRP6P59044 892 aa10.23□□□□□ -0.77
CHEK2-220ENST00000454252 TOM1L2Q6ZVM7 507 aa10.23□□□□□ -0.77
CHEK2-220ENST00000454252 NLRP13Q86W25 1043 aa10.23□□□□□ -0.77
CHEK2-220ENST00000454252 MARCH10Q8NA82 808 aaPredicted RBP10.23□□□□□ -0.77
CHEK2-220ENST00000454252 THRAP3Q9Y2W1 955 aaKnown RBP10.23□□□□□ -0.77
CHEK2-220ENST00000454252 OVOS2A0A0G2JMS6 1433 aa10.23□□□□□ -0.77
CHEK2-220ENST00000454252 OVOS2A0A0J9YW53 1432 aa10.23□□□□□ -0.77
CHEK2-220ENST00000454252 CRB1P82279 1406 aa10.23□□□□□ -0.77
CHEK2-220ENST00000454252 OVOS2Q6IE36 1432 aa10.23□□□□□ -0.77
CHEK2-220ENST00000454252 DDB1Q16531 1140 aa10.22□□□□□ -0.77
CHEK2-220ENST00000454252 CENPJQ9HC77 1338 aaPredicted RBP10.22□□□□□ -0.77
CHEK2-220ENST00000454252 USP6P35125 1406 aa10.22□□□□□ -0.77
CHEK2-220ENST00000454252 ITSN1Q15811 1721 aa10.21□□□□□ -0.77
CHEK2-220ENST00000454252 PIAS4Q8N2W9 510 aaPredicted RBP10.21□□□□□ -0.77
CHEK2-220ENST00000454252 STAC3Q96MF2 364 aa10.21□□□□□ -0.77
CHEK2-220ENST00000454252 ATF5Q9Y2D1 282 aaPredicted RBP10.21□□□□□ -0.77
CHEK2-220ENST00000454252 AATKQ6ZMQ8 1374 aa10.21□□□□□ -0.78
CHEK2-220ENST00000454252 LRRC37A3O60309 1634 aa10.2□□□□□ -0.78
CHEK2-220ENST00000454252 PTGER2P43116 358 aa10.2□□□□□ -0.78
CHEK2-220ENST00000454252 BCL11BQ9C0K0 894 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms