RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 CRYBG1Q9Y4K1 1723 aa21.06■□□□□ 0.96
LYSMD3-202ENST00000453259 THSD7AQ9UPZ6 1657 aa21.05■□□□□ 0.96
LYSMD3-202ENST00000453259 ITSN1Q15811 1721 aa21.05■□□□□ 0.96
LYSMD3-202ENST00000453259 WASLO00401 505 aaPredicted RBP21.05■□□□□ 0.96
LYSMD3-202ENST00000453259 ATP7BP35670 1465 aa21.03■□□□□ 0.96
LYSMD3-202ENST00000453259 TRAK1Q9UPV9 953 aa21.03■□□□□ 0.96
LYSMD3-202ENST00000453259 PRR36Q9H6K5 1346 aa21.03■□□□□ 0.96
LYSMD3-202ENST00000453259 PLEKHG5O94827 1062 aa21.02■□□□□ 0.96
LYSMD3-202ENST00000453259 HRCP23327 699 aa21.02■□□□□ 0.96
LYSMD3-202ENST00000453259 NGDNQ8NEJ9 315 aaKnown RBP21.02■□□□□ 0.96
LYSMD3-202ENST00000453259 PRDM11Q9NQV5 511 aa21.02■□□□□ 0.96
LYSMD3-202ENST00000453259 PARD3Q8TEW0 1356 aa21.01■□□□□ 0.95
LYSMD3-202ENST00000453259 HIRIP3Q9BW71 556 aaPredicted RBP21.01■□□□□ 0.95
LYSMD3-202ENST00000453259 MINK1Q8N4C8 1332 aaPredicted RBP21.01■□□□□ 0.95
LYSMD3-202ENST00000453259 RAB3GAP2Q9H2M9 1393 aa20.99■□□□□ 0.95
LYSMD3-202ENST00000453259 TNS1Q9HBL0 1735 aaKnown RBP20.98■□□□□ 0.95
LYSMD3-202ENST00000453259 DCAF11Q8TEB1 546 aa20.97■□□□□ 0.95
LYSMD3-202ENST00000453259 SPATA31A1Q5TZJ5 1347 aa20.97■□□□□ 0.95
LYSMD3-202ENST00000453259 ARHGEF28Q8N1W1 1705 aaKnown RBP20.96■□□□□ 0.95
LYSMD3-202ENST00000453259 PAK3O75914 559 aaPredicted RBP20.96■□□□□ 0.95
LYSMD3-202ENST00000453259 EN1Q05925 392 aaPredicted RBP20.96■□□□□ 0.95
LYSMD3-202ENST00000453259 FAM196AQ6ZSG2 479 aa20.96■□□□□ 0.95
LYSMD3-202ENST00000453259 PSDA5PKW4 1024 aaPredicted RBP20.95■□□□□ 0.94
LYSMD3-202ENST00000453259 PHRF1Q9P1Y6 1649 aaKnown RBP20.95■□□□□ 0.94
LYSMD3-202ENST00000453259 POLR3AO14802 1390 aaPredicted RBP20.95■□□□□ 0.94
LYSMD3-202ENST00000453259 KIAA0232Q92628 1395 aa20.95■□□□□ 0.94
LYSMD3-202ENST00000453259 NUDT16Q96DE0 195 aaKnown RBP20.93■□□□□ 0.94
LYSMD3-202ENST00000453259 BARGINQ6ZT62 677 aa20.92■□□□□ 0.94
LYSMD3-202ENST00000453259 TOPAZ1Q8N9V7 1692 aa20.91■□□□□ 0.94
LYSMD3-202ENST00000453259 KDM2AQ9Y2K7 1162 aa20.91■□□□□ 0.94
LYSMD3-202ENST00000453259 CPDO75976 1380 aa20.9■□□□□ 0.94
LYSMD3-202ENST00000453259 C11orf95C9JLR9 678 aaPredicted RBP20.9■□□□□ 0.94
LYSMD3-202ENST00000453259 CCDC61Q9Y6R9 512 aa20.9■□□□□ 0.94
LYSMD3-202ENST00000453259 SSH2Q76I76 1423 aa20.89■□□□□ 0.94
LYSMD3-202ENST00000453259 R3HDM1Q15032 1099 aaKnown RBP20.89■□□□□ 0.93
LYSMD3-202ENST00000453259 CAMKK2Q96RR4 588 aa20.89■□□□□ 0.93
LYSMD3-202ENST00000453259 KIAA1210Q9ULL0 1709 aa20.89■□□□□ 0.93
LYSMD3-202ENST00000453259 BRD4O60885 1362 aaPredicted RBP20.88■□□□□ 0.93
LYSMD3-202ENST00000453259 PLEKHG3A1L390 1219 aa20.87■□□□□ 0.93
LYSMD3-202ENST00000453259 FAM182BQ5T319 152 aa20.87■□□□□ 0.93
LYSMD3-202ENST00000453259 THRAP3Q9Y2W1 955 aaKnown RBP20.87■□□□□ 0.93
LYSMD3-202ENST00000453259 NRKQ7Z2Y5 1582 aa20.87■□□□□ 0.93
LYSMD3-202ENST00000453259 EZH2Q15910 746 aaKnown RBP20.86■□□□□ 0.93
LYSMD3-202ENST00000453259 CDK19Q9BWU1 502 aa20.86■□□□□ 0.93
LYSMD3-202ENST00000453259 STRN4Q9NRL3 753 aa20.86■□□□□ 0.93
LYSMD3-202ENST00000453259 USP19O94966 1318 aa20.85■□□□□ 0.93
LYSMD3-202ENST00000453259 ACEP12821 1306 aa20.85■□□□□ 0.93
LYSMD3-202ENST00000453259 TRIM37O94972 964 aa20.85■□□□□ 0.93
LYSMD3-202ENST00000453259 EVA1CP58658 441 aa20.85■□□□□ 0.93
LYSMD3-202ENST00000453259 PDE3BQ13370 1112 aa20.85■□□□□ 0.93
LYSMD3-202ENST00000453259 NBPF8Q3BBV2 869 aa20.85■□□□□ 0.93
LYSMD3-202ENST00000453259 RREB1Q92766 1687 aa20.85■□□□□ 0.93
LYSMD3-202ENST00000453259 LMO7Q8WWI1 1683 aa20.84■□□□□ 0.93
LYSMD3-202ENST00000453259 CHRNA2Q15822 529 aa20.84■□□□□ 0.93
LYSMD3-202ENST00000453259 APBA3O96018 575 aa20.83■□□□□ 0.93
LYSMD3-202ENST00000453259 ZC3H6P61129 1189 aaKnown RBP20.83■□□□□ 0.93
LYSMD3-202ENST00000453259 TCP11L2Q8N4U5 519 aa20.83■□□□□ 0.93
LYSMD3-202ENST00000453259 CAMTA1Q9Y6Y1 1673 aa20.82■□□□□ 0.92
LYSMD3-202ENST00000453259 NBPF14Q5TI25 921 aa20.81■□□□□ 0.92
LYSMD3-202ENST00000453259 NLRP13Q86W25 1043 aa20.81■□□□□ 0.92
LYSMD3-202ENST00000453259 ABTB2Q8N961 1025 aa20.81■□□□□ 0.92
LYSMD3-202ENST00000453259 PARP4Q9UKK3 1724 aaKnown RBP20.8■□□□□ 0.92
LYSMD3-202ENST00000453259 NUP188Q5SRE5 1749 aa20.78■□□□□ 0.92
LYSMD3-202ENST00000453259 USP35Q9P2H5 1018 aa20.78■□□□□ 0.92
LYSMD3-202ENST00000453259 RGPD3A6NKT7 1758 aaPredicted RBP20.77■□□□□ 0.92
LYSMD3-202ENST00000453259 RGPD4Q7Z3J3 1758 aa20.77■□□□□ 0.92
LYSMD3-202ENST00000453259 COL5A2P05997 1499 aaPredicted RBP20.77■□□□□ 0.92
LYSMD3-202ENST00000453259 NUTM2GQ5VZR2 741 aa20.77■□□□□ 0.92
LYSMD3-202ENST00000453259 LARP1Q6PKG0 1096 aaKnown RBP20.77■□□□□ 0.92
LYSMD3-202ENST00000453259 GCP02774 474 aa20.76■□□□□ 0.91
LYSMD3-202ENST00000453259 CRB1P82279 1406 aa20.76■□□□□ 0.91
LYSMD3-202ENST00000453259 PPIP5K1Q6PFW1 1433 aa20.76■□□□□ 0.91
LYSMD3-202ENST00000453259 OVOS2A0A0G2JMS6 1433 aa20.75■□□□□ 0.91
LYSMD3-202ENST00000453259 OVOS2A0A0J9YW53 1432 aa20.75■□□□□ 0.91
LYSMD3-202ENST00000453259 OVOS2Q6IE36 1432 aa20.75■□□□□ 0.91
LYSMD3-202ENST00000453259 AATKQ6ZMQ8 1374 aa20.74■□□□□ 0.91
LYSMD3-202ENST00000453259 SRPK2P78362 688 aaKnown RBP20.73■□□□□ 0.91
LYSMD3-202ENST00000453259 CENPJQ9HC77 1338 aaPredicted RBP20.73■□□□□ 0.91
LYSMD3-202ENST00000453259 SLIT3O75094 1523 aa20.72■□□□□ 0.91
LYSMD3-202ENST00000453259 NINLQ9Y2I6 1382 aa20.72■□□□□ 0.91
LYSMD3-202ENST00000453259 SPON1Q9HCB6 807 aa20.71■□□□□ 0.91
LYSMD3-202ENST00000453259 USP6P35125 1406 aa20.7■□□□□ 0.9
LYSMD3-202ENST00000453259 PEAK1Q9H792 1746 aa20.7■□□□□ 0.9
LYSMD3-202ENST00000453259 PLSCR1O15162 318 aa20.7■□□□□ 0.9
LYSMD3-202ENST00000453259 CDCA7Q9BWT1 371 aaPredicted RBP20.7■□□□□ 0.9
LYSMD3-202ENST00000453259 BCL9O00512 1426 aa20.7■□□□□ 0.9
LYSMD3-202ENST00000453259 DCAF8L1A6NGE4 600 aa20.68■□□□□ 0.9
LYSMD3-202ENST00000453259 LRRC37A3O60309 1634 aa20.67■□□□□ 0.9
LYSMD3-202ENST00000453259 KCNQ2O43526 872 aa20.67■□□□□ 0.9
LYSMD3-202ENST00000453259 QRICH2Q9H0J4 1663 aa20.67■□□□□ 0.9
LYSMD3-202ENST00000453259 NLRP6P59044 892 aa20.66■□□□□ 0.9
LYSMD3-202ENST00000453259 DDB1Q16531 1140 aa20.66■□□□□ 0.9
LYSMD3-202ENST00000453259 PPP1R1BQ9UD71 204 aaPredicted RBP20.66■□□□□ 0.9
LYSMD3-202ENST00000453259 NBPF1Q3BBV0 1214 aa20.65■□□□□ 0.9
LYSMD3-202ENST00000453259 WDR17Q8IZU2 1322 aa20.64■□□□□ 0.89
LYSMD3-202ENST00000453259 BCL11BQ9C0K0 894 aaPredicted RBP20.64■□□□□ 0.89
LYSMD3-202ENST00000453259 CABP2Q9NPB3 220 aa20.64■□□□□ 0.89
LYSMD3-202ENST00000453259 SBF2Q86WG5 1849 aa20.63■□□□□ 0.89
LYSMD3-202ENST00000453259 YY1P25490 414 aa20.63■□□□□ 0.89
LYSMD3-202ENST00000453259 KCNH5Q8NCM2 988 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms